RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 CHGBP05060 677 aa24.95■■□□□ 1.58
VPS16-207ENST00000481812 RUFY2Q8WXA3 655 aa24.95■■□□□ 1.58
VPS16-207ENST00000481812 RIOK1Q9BRS2 568 aaKnown RBP24.95■■□□□ 1.58
VPS16-207ENST00000481812 PUS7LQ9H0K6 701 aaKnown RBP24.95■■□□□ 1.58
VPS16-207ENST00000481812 MAGEB6P1A0A0J9YX57 407 aa24.94■■□□□ 1.58
VPS16-207ENST00000481812 MYO1BO43795 1136 aa24.94■■□□□ 1.58
VPS16-207ENST00000481812 EGFRP00533 1210 aa24.94■■□□□ 1.58
VPS16-207ENST00000481812 NMIQ13287 307 aaPredicted RBP24.94■■□□□ 1.58
VPS16-207ENST00000481812 SLFNL1Q499Z3 407 aa24.94■■□□□ 1.58
VPS16-207ENST00000481812 MCMDC2Q4G0Z9 681 aa24.94■■□□□ 1.58
VPS16-207ENST00000481812 TRPM4Q8TD43 1214 aa24.94■■□□□ 1.58
VPS16-207ENST00000481812 RRAGCQ9HB90 399 aa24.94■■□□□ 1.58
VPS16-207ENST00000481812 AATFQ9NY61 560 aaKnown RBP eCLIP24.94■■□□□ 1.58
VPS16-207ENST00000481812 PCDHAC2Q9Y5I4 1007 aa24.94■■□□□ 1.58
VPS16-207ENST00000481812 RAD50Q92878 1312 aa24.93■■□□□ 1.58
VPS16-207ENST00000481812 HIRAP54198 1017 aaPredicted RBP24.93■■□□□ 1.58
VPS16-207ENST00000481812 RHBDL3P58872 404 aa24.93■■□□□ 1.58
VPS16-207ENST00000481812 RBM26Q5T8P6 1007 aaKnown RBP24.93■■□□□ 1.58
VPS16-207ENST00000481812 ZC3H15Q8WU90 426 aaKnown RBP24.93■■□□□ 1.58
VPS16-207ENST00000481812 AIDAQ96BJ3 306 aa24.93■■□□□ 1.58
VPS16-207ENST00000481812 FAM227BQ96M60 508 aa24.93■■□□□ 1.58
VPS16-207ENST00000481812 CDK5RAP2Q96SN8 1893 aa24.93■■□□□ 1.58
VPS16-207ENST00000481812 FOCADQ5VW36 1801 aa24.92■■□□□ 1.58
VPS16-207ENST00000481812 A0A0D9SFI3 127 aa24.92■■□□□ 1.58
VPS16-207ENST00000481812 NBPF9Q3BBW0 867 aa24.92■■□□□ 1.58
VPS16-207ENST00000481812 SPDYE2Q495Y8 402 aa24.92■■□□□ 1.58
VPS16-207ENST00000481812 FKBP1CQ5VVH2 108 aa24.92■■□□□ 1.58
VPS16-207ENST00000481812 CDC42EP5Q6NZY7 148 aa24.92■■□□□ 1.58
VPS16-207ENST00000481812 CASC1Q6TDU7 716 aa24.92■■□□□ 1.58
VPS16-207ENST00000481812 MIGA1Q8NAN2 632 aa24.92■■□□□ 1.58
VPS16-207ENST00000481812 PGAP2Q9UHJ9 254 aa24.92■■□□□ 1.58
VPS16-207ENST00000481812 NPM3O75607 178 aaKnown RBP24.91■■□□□ 1.58
VPS16-207ENST00000481812 MFAP1P55081 439 aaKnown RBP24.91■■□□□ 1.58
VPS16-207ENST00000481812 DYNLL1P63167 89 aaKnown RBP24.91■■□□□ 1.58
VPS16-207ENST00000481812 CWC27Q6UX04 472 aaKnown RBP24.91■■□□□ 1.58
VPS16-207ENST00000481812 STRBPQ96SI9 672 aaKnown RBP24.91■■□□□ 1.58
VPS16-207ENST00000481812 SEC62Q99442 399 aaKnown RBP24.91■■□□□ 1.58
VPS16-207ENST00000481812 TDRD3Q9H7E2 651 aaKnown RBP24.91■■□□□ 1.58
VPS16-207ENST00000481812 USP40Q9NVE5 1235 aa24.91■■□□□ 1.58
VPS16-207ENST00000481812 ZNF70Q9UC06 446 aaPredicted RBP24.91■■□□□ 1.58
VPS16-207ENST00000481812 PITPNM2Q9BZ72 1349 aa24.9■■□□□ 1.58
VPS16-207ENST00000481812 M0R2C6 588 aa24.9■■□□□ 1.58
VPS16-207ENST00000481812 GPAA1O43292 621 aa24.9■■□□□ 1.58
VPS16-207ENST00000481812 MBD4O95243 580 aa24.9■■□□□ 1.58
VPS16-207ENST00000481812 GNAT2P19087 354 aa24.9■■□□□ 1.58
VPS16-207ENST00000481812 YY1P25490 414 aa24.9■■□□□ 1.58
VPS16-207ENST00000481812 IDI2Q9BXS1 227 aa24.9■■□□□ 1.58
VPS16-207ENST00000481812 NMRK2Q9NPI5 230 aa24.9■■□□□ 1.58
VPS16-207ENST00000481812 POLR2AP24928 1970 aaKnown RBP24.89■■□□□ 1.58
VPS16-207ENST00000481812 LCORLQ8N3X6 602 aa24.89■■□□□ 1.58
VPS16-207ENST00000481812 CRNKL1Q9BZJ0 848 aaKnown RBP24.89■■□□□ 1.58
VPS16-207ENST00000481812 GPBP1L1Q9HC44 474 aaPredicted RBP24.89■■□□□ 1.58
VPS16-207ENST00000481812 TMOD2Q9NZR1 351 aa24.89■■□□□ 1.58
VPS16-207ENST00000481812 RPAP1Q9BWH6 1393 aaPredicted RBP24.89■■□□□ 1.57
VPS16-207ENST00000481812 SGSM2O43147 1006 aa24.88■■□□□ 1.57
VPS16-207ENST00000481812 TEX11Q8IYF3 940 aa24.88■■□□□ 1.57
VPS16-207ENST00000481812 SH3RF3Q8TEJ3 882 aaPredicted RBP24.88■■□□□ 1.57
VPS16-207ENST00000481812 ZNF526Q8TF50 670 aaPredicted RBP24.88■■□□□ 1.57
VPS16-207ENST00000481812 ARMT1Q9H993 441 aa24.88■■□□□ 1.57
VPS16-207ENST00000481812 CCDC171Q6TFL3 1326 aa24.87■■□□□ 1.57
VPS16-207ENST00000481812 ESYT1Q9BSJ8 1104 aa24.87■■□□□ 1.57
VPS16-207ENST00000481812 WDHD1O75717 1129 aaPredicted RBP24.86■■□□□ 1.57
VPS16-207ENST00000481812 TNFAIP1Q13829 316 aa24.86■■□□□ 1.57
VPS16-207ENST00000481812 FAM83AQ86UY5 434 aa24.86■■□□□ 1.57
VPS16-207ENST00000481812 APOBEC3FQ8IUX4 373 aaKnown RBP24.86■■□□□ 1.57
VPS16-207ENST00000481812 ATP8A2Q9NTI2 1148 aa24.86■■□□□ 1.57
VPS16-207ENST00000481812 ENTPD3O75355 529 aa24.85■■□□□ 1.57
VPS16-207ENST00000481812 GIMAP6Q6P9H5 292 aa24.85■■□□□ 1.57
VPS16-207ENST00000481812 ZNF589Q86UQ0 364 aaPredicted RBP24.85■■□□□ 1.57
VPS16-207ENST00000481812 LDHDQ86WU2 507 aa24.85■■□□□ 1.57
VPS16-207ENST00000481812 CLRN2A0PK11 232 aa24.84■■□□□ 1.57
VPS16-207ENST00000481812 PATL2C9JE40 543 aaKnown RBP24.84■■□□□ 1.57
VPS16-207ENST00000481812 EAPPQ56P03 285 aaPredicted RBP24.84■■□□□ 1.57
VPS16-207ENST00000481812 ANGEL2Q5VTE6 544 aaKnown RBP24.84■■□□□ 1.57
VPS16-207ENST00000481812 CCDC129Q6ZRS4 1044 aa24.84■■□□□ 1.57
VPS16-207ENST00000481812 GGA3Q9NZ52 723 aa24.84■■□□□ 1.57
VPS16-207ENST00000481812 MKRN1Q9UHC7 482 aaKnown RBP24.84■■□□□ 1.57
VPS16-207ENST00000481812 SLC4A4Q9Y6R1 1079 aa24.84■■□□□ 1.57
VPS16-207ENST00000481812 MYH1P12882 1939 aa24.83■■□□□ 1.57
VPS16-207ENST00000481812 EIF5BO60841 1220 aaKnown RBP24.83■■□□□ 1.57
VPS16-207ENST00000481812 TNNI2P48788 182 aa24.83■■□□□ 1.57
VPS16-207ENST00000481812 TGFBRAP1Q8WUH2 860 aa24.83■■□□□ 1.57
VPS16-207ENST00000481812 DCPSQ96C86 337 aaKnown RBP24.83■■□□□ 1.57
VPS16-207ENST00000481812 IL25Q9H293 177 aa24.83■■□□□ 1.57
VPS16-207ENST00000481812 FAM198AQ9UFP1 575 aa24.83■■□□□ 1.57
VPS16-207ENST00000481812 ASTN2O75129 1339 aaPredicted RBP24.83■■□□□ 1.56
VPS16-207ENST00000481812 COL2A1P02458 1487 aaPredicted RBP24.83■■□□□ 1.56
VPS16-207ENST00000481812 GSG1L2A8MUP6 293 aa24.82■■□□□ 1.56
VPS16-207ENST00000481812 USP5P45974 858 aa24.82■■□□□ 1.56
VPS16-207ENST00000481812 NFIAQ12857 509 aa24.82■■□□□ 1.56
VPS16-207ENST00000481812 ALX1Q15699 326 aa24.82■■□□□ 1.56
VPS16-207ENST00000481812 FAM151AQ8WW52 585 aa24.82■■□□□ 1.56
VPS16-207ENST00000481812 VEZTQ9HBM0 779 aa24.82■■□□□ 1.56
VPS16-207ENST00000481812 PPP2R3BQ9Y5P8 575 aa24.82■■□□□ 1.56
VPS16-207ENST00000481812 NAV1Q8NEY1 1877 aa24.81■■□□□ 1.56
VPS16-207ENST00000481812 PRKAB2O43741 272 aa24.81■■□□□ 1.56
VPS16-207ENST00000481812 HSPD1P10809 573 aaKnown RBP24.81■■□□□ 1.56
VPS16-207ENST00000481812 DDRGK1Q96HY6 314 aa24.81■■□□□ 1.56
VPS16-207ENST00000481812 DSCC1Q9BVC3 393 aa24.81■■□□□ 1.56
VPS16-207ENST00000481812 DCP1AQ9NPI6 582 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms