RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 KCNK12Q9HB15 430 aa4.29□□□□□ -1.72
USH2A-204ENST00000481786 FNDC3AQ9Y2H6 1198 aaKnown RBP4.29□□□□□ -1.72
USH2A-204ENST00000481786 TSPAN15O95858 294 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 INHBBP09529 407 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 C1QTNF9P0C862 333 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 ESRRAP11474 423 aaPredicted RBP4.28□□□□□ -1.72
USH2A-204ENST00000481786 MAP7Q14244 749 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 AKAP4Q5JQC9 854 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 FYB2Q5VWT5 728 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 PRR23BQ6ZRT6 265 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 SYDE1Q6ZW31 735 aaPredicted RBP4.28□□□□□ -1.72
USH2A-204ENST00000481786 ZNF438Q7Z4V0 828 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 SIAH1Q8IUQ4 282 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 TMEM102Q8N9M5 508 aaPredicted RBP4.28□□□□□ -1.72
USH2A-204ENST00000481786 ZSCAN18Q8TBC5 510 aaPredicted RBP4.28□□□□□ -1.72
USH2A-204ENST00000481786 BSNDQ8WZ55 320 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 C20orf173Q96LM9 149 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 OSMRQ99650 979 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 CHRDQ9H2X0 955 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 STIM2Q9P246 746 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 USTQ9Y2C2 406 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 DAGLAQ9Y4D2 1042 aa4.28□□□□□ -1.72
USH2A-204ENST00000481786 METTL12A8MUP2 240 aa4.27□□□□□ -1.73
USH2A-204ENST00000481786 CES1P23141 567 aa4.27□□□□□ -1.73
USH2A-204ENST00000481786 CDK5R2Q13319 367 aa4.27□□□□□ -1.73
USH2A-204ENST00000481786 ZSWIM9Q86XI8 627 aa4.27□□□□□ -1.73
USH2A-204ENST00000481786 NETO1Q8TDF5 533 aa4.27□□□□□ -1.73
USH2A-204ENST00000481786 ASAP3Q8TDY4 903 aa4.27□□□□□ -1.73
USH2A-204ENST00000481786 MAOBP27338 520 aa4.26□□□□□ -1.73
USH2A-204ENST00000481786 ASPAP45381 313 aa4.26□□□□□ -1.73
USH2A-204ENST00000481786 AOC3Q16853 763 aa4.26□□□□□ -1.73
USH2A-204ENST00000481786 PDE12Q6L8Q7 609 aaKnown RBP4.26□□□□□ -1.73
USH2A-204ENST00000481786 ANKLE2Q86XL3 938 aa4.26□□□□□ -1.73
USH2A-204ENST00000481786 HELQQ8TDG4 1101 aa4.26□□□□□ -1.73
USH2A-204ENST00000481786 GTF3C2Q8WUA4 911 aaPredicted RBP4.26□□□□□ -1.73
USH2A-204ENST00000481786 MISP3Q96FF7 219 aa4.26□□□□□ -1.73
USH2A-204ENST00000481786 GGNBP2Q9H3C7 697 aa4.26□□□□□ -1.73
USH2A-204ENST00000481786 FAM13BQ9NYF5 915 aa4.26□□□□□ -1.73
USH2A-204ENST00000481786 PLAGL2Q9UPG8 496 aa4.26□□□□□ -1.73
USH2A-204ENST00000481786 AP4E1Q9UPM8 1137 aa4.26□□□□□ -1.73
USH2A-204ENST00000481786 FAM87AP0C7U9 286 aa4.25□□□□□ -1.73
USH2A-204ENST00000481786 CTSWP56202 376 aa4.25□□□□□ -1.73
USH2A-204ENST00000481786 PRKCQQ04759 706 aa4.25□□□□□ -1.73
USH2A-204ENST00000481786 KCNMB1Q16558 191 aa4.25□□□□□ -1.73
USH2A-204ENST00000481786 ABTB2Q8N961 1025 aa4.25□□□□□ -1.73
USH2A-204ENST00000481786 FLAD1Q8NFF5 587 aa4.25□□□□□ -1.73
USH2A-204ENST00000481786 SOX17Q9H6I2 414 aaPredicted RBP4.25□□□□□ -1.73
USH2A-204ENST00000481786 LATS2Q9NRM7 1088 aa4.25□□□□□ -1.73
USH2A-204ENST00000481786 FAM53CQ9NYF3 392 aa4.25□□□□□ -1.73
USH2A-204ENST00000481786 VAV3Q9UKW4 847 aa4.25□□□□□ -1.73
USH2A-204ENST00000481786 SCRIBQ14160 1630 aa4.24□□□□□ -1.73
USH2A-204ENST00000481786 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.24□□□□□ -1.73
USH2A-204ENST00000481786 EREGO14944 169 aa4.24□□□□□ -1.73
USH2A-204ENST00000481786 LEFTY1O75610 366 aa4.24□□□□□ -1.73
USH2A-204ENST00000481786 ZNF423Q2M1K9 1284 aa4.24□□□□□ -1.73
USH2A-204ENST00000481786 RETREG2Q8NC44 543 aa4.24□□□□□ -1.73
USH2A-204ENST00000481786 GSX1Q9H4S2 264 aaPredicted RBP4.24□□□□□ -1.73
USH2A-204ENST00000481786 PITPNM2Q9BZ72 1349 aa4.23□□□□□ -1.73
USH2A-204ENST00000481786 THOC2Q8NI27 1593 aaKnown RBP4.23□□□□□ -1.73
USH2A-204ENST00000481786 NPIPB6E9PJ23 425 aa4.23□□□□□ -1.73
USH2A-204ENST00000481786 NPR3P17342 541 aa4.23□□□□□ -1.73
USH2A-204ENST00000481786 HOXA5P20719 270 aa4.23□□□□□ -1.73
USH2A-204ENST00000481786 MPSTP25325 297 aa4.23□□□□□ -1.73
USH2A-204ENST00000481786 MTMR3Q13615 1198 aa4.23□□□□□ -1.73
USH2A-204ENST00000481786 NOM1Q5C9Z4 860 aaKnown RBP4.23□□□□□ -1.73
USH2A-204ENST00000481786 RAD18Q9NS91 495 aa4.23□□□□□ -1.73
USH2A-204ENST00000481786 RAPGEFL1Q9UHV5 662 aa4.23□□□□□ -1.73
USH2A-204ENST00000481786 PPP1R9AQ9ULJ8 1098 aa4.23□□□□□ -1.73
USH2A-204ENST00000481786 EIF1AXP47813 144 aaKnown RBP4.22□□□□□ -1.73
USH2A-204ENST00000481786 OXCT1P55809 520 aa4.22□□□□□ -1.73
USH2A-204ENST00000481786 CYP27C1Q4G0S4 372 aa4.22□□□□□ -1.73
USH2A-204ENST00000481786 B4GALNT3Q6L9W6 998 aa4.22□□□□□ -1.73
USH2A-204ENST00000481786 SLC23A3Q6PIS1 610 aa4.22□□□□□ -1.73
USH2A-204ENST00000481786 AMIGO3Q86WK7 504 aa4.22□□□□□ -1.73
USH2A-204ENST00000481786 EDEM1Q92611 657 aa4.22□□□□□ -1.73
USH2A-204ENST00000481786 CTNND2Q9UQB3 1225 aa4.22□□□□□ -1.73
USH2A-204ENST00000481786 MTMR7Q9Y216 660 aa4.22□□□□□ -1.73
USH2A-204ENST00000481786 PDGFAP04085 211 aa4.21□□□□□ -1.74
USH2A-204ENST00000481786 ITIH2P19823 946 aa4.21□□□□□ -1.74
USH2A-204ENST00000481786 MZF1P28698 734 aaPredicted RBP4.21□□□□□ -1.74
USH2A-204ENST00000481786 KRTAP10-2P60368 255 aa4.21□□□□□ -1.74
USH2A-204ENST00000481786 FKBP4Q02790 459 aaKnown RBP eCLIP4.21□□□□□ -1.74
USH2A-204ENST00000481786 DNM1Q05193 864 aaKnown RBP4.21□□□□□ -1.74
USH2A-204ENST00000481786 SF3B2Q13435 895 aaKnown RBP4.21□□□□□ -1.74
USH2A-204ENST00000481786 POU4F3Q15319 338 aa4.21□□□□□ -1.74
USH2A-204ENST00000481786 IFI16Q16666 785 aaKnown RBP4.21□□□□□ -1.74
USH2A-204ENST00000481786 ANGEL2Q5VTE6 544 aaKnown RBP4.21□□□□□ -1.74
USH2A-204ENST00000481786 PEAR1Q5VY43 1037 aaPredicted RBP4.21□□□□□ -1.74
USH2A-204ENST00000481786 ALKBH2Q6NS38 261 aa4.21□□□□□ -1.74
USH2A-204ENST00000481786 XKR5Q6UX68 686 aa4.21□□□□□ -1.74
USH2A-204ENST00000481786 HRASLS5Q96KN8 279 aa4.21□□□□□ -1.74
USH2A-204ENST00000481786 PPP1R16BQ96T49 567 aa4.21□□□□□ -1.74
USH2A-204ENST00000481786 TRIM56Q9BRZ2 755 aaKnown RBP4.21□□□□□ -1.74
USH2A-204ENST00000481786 BHLHE41Q9C0J9 482 aaPredicted RBP4.21□□□□□ -1.74
USH2A-204ENST00000481786 ANO2Q9NQ90 1003 aa4.21□□□□□ -1.74
USH2A-204ENST00000481786 NCAPD3P42695 1498 aa4.21□□□□□ -1.74
USH2A-204ENST00000481786 BAZ1AQ9NRL2 1556 aaPredicted RBP4.21□□□□□ -1.74
USH2A-204ENST00000481786 ICMTO60725 284 aa4.2□□□□□ -1.74
USH2A-204ENST00000481786 FAM13AO94988 1023 aa4.2□□□□□ -1.74
USH2A-204ENST00000481786 ABL1P00519 1130 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms