RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 KIF5CO60282 957 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 Q4G0T1 1027 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 TTC22Q5TAA0 569 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 FUKQ8N0W3 1084 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 SCLT1Q96NL6 688 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 TPX2Q9ULW0 747 aaKnown RBP11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 MED14O60244 1454 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 ASXL1Q8IXJ9 1541 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 ABLIM1O14639 778 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 PPP1R12BO60237 982 aaPredicted RBP11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 VIL1P09327 827 aaKnown RBP11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 LINGO3P0C6S8 592 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 FAM200BP0CF97 657 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 GNAT1P11488 350 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 SFPQP23246 707 aaKnown RBP eCLIP11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 IGSF22Q8N9C0 903 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 DHRS1Q96LJ7 313 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 CLSTN2Q9H4D0 955 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 TMEM221A6NGB7 291 aa11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 CYP27B1O15528 508 aa11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 PHACTR2O75167 634 aa11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 LUC7L3O95232 432 aaKnown RBP11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 RPSAP08865 295 aaKnown RBP11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 PDHBP11177 359 aa11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 SCNN1BP51168 640 aa11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 INF2Q27J81 1249 aa11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 CCHCR1Q8TD31 782 aa11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 LZICQ8WZA0 190 aa11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 CAPS2Q9BXY5 557 aa11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 ZWILCHQ9H900 591 aa11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.73□□□□□ -0.53
PRPF4B-206ENST00000481109 STX6O43752 255 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 ZNF189O75820 626 aaPredicted RBP11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 PENKP01210 267 aaPredicted RBP11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 CHMP4BP1P59074 171 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 TAF7Q15545 349 aaPredicted RBP11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 KIAA0753Q2KHM9 967 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 NUGGCQ68CJ6 796 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 STAG2Q8N3U4 1231 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 C15orf41Q9Y2V0 281 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 DISP3Q9P2K9 1392 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 ERBINQ96RT1 1412 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 DESP17661 470 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 INHBCP55103 352 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 RNF168Q8IYW5 571 aaPredicted RBP11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 RASSF8Q8NHQ8 419 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 BCL2L13Q9BXK5 485 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 NACA2Q9H009 215 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 MAPK8IP1Q9UQF2 711 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 PPIP5K1Q6PFW1 1433 aa11.72□□□□□ -0.53
PRPF4B-206ENST00000481109 VDRP11473 427 aa11.71□□□□□ -0.53
PRPF4B-206ENST00000481109 CNGA1P29973 690 aa11.71□□□□□ -0.53
PRPF4B-206ENST00000481109 AMPHP49418 695 aa11.71□□□□□ -0.53
PRPF4B-206ENST00000481109 ARL10Q8N8L6 244 aa11.71□□□□□ -0.53
PRPF4B-206ENST00000481109 NSMCE1Q8WV22 266 aa11.71□□□□□ -0.53
PRPF4B-206ENST00000481109 SH3GL2Q99962 352 aa11.71□□□□□ -0.53
PRPF4B-206ENST00000481109 DNAJC25Q9H1X3 360 aa11.71□□□□□ -0.53
PRPF4B-206ENST00000481109 CENPHQ9H3R5 247 aa11.71□□□□□ -0.53
PRPF4B-206ENST00000481109 SAMD9LQ8IVG5 1584 aa11.71□□□□□ -0.53
PRPF4B-206ENST00000481109 NOS1P29475 1434 aa11.71□□□□□ -0.53
PRPF4B-206ENST00000481109 SLC27A2O14975 620 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 CEP104O60308 925 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 CCDC92Q53HC0 331 aaPredicted RBP11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 ARMCX5Q6P1M9 558 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 WDR93Q6P2C0 686 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 SYNE3Q6ZMZ3 975 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 TMC6Q7Z403 805 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 TESK2Q96S53 571 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 TRAIPQ9BWF2 469 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 BRD8Q9H0E9 1235 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 ITGB1BP2Q9UKP3 347 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 PLA2R1Q13018 1463 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 WDR7Q9Y4E6 1490 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 PPRC1Q5VV67 1664 aaKnown RBP11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 CDC42BPBQ9Y5S2 1711 aa11.71□□□□□ -0.54
PRPF4B-206ENST00000481109 MAGI2Q86UL8 1455 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 LRRIQ3A6PVS8 624 aaPredicted RBP11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 BECN2A8MW95 431 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 KRT38O76015 456 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 SLC7A5Q01650 507 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 E2F5Q15329 346 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 PABPC1LQ4VXU2 614 aaKnown RBP11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 PLEKHM2Q8IWE5 1019 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 BHMTQ93088 406 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 RUFY1Q96T51 708 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 MPHOSPH6Q99547 160 aaKnown RBP11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 MYO1AQ9UBC5 1043 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 SRRM3A6NNA2 597 aaPredicted RBP11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 ATP4AP20648 1035 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 SKOR1P84550 965 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 LCA5Q86VQ0 697 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 ANKRD27Q96NW4 1050 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 ZFATQ9P243 1243 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 SH3TC1Q8TE82 1336 aa11.7□□□□□ -0.54
PRPF4B-206ENST00000481109 NDUFAB1O14561 156 aa11.69□□□□□ -0.54
PRPF4B-206ENST00000481109 CUTAO60888 179 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms