RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 ZNF532Q9HCE3 1301 aa14.96□□□□□ -0.01
SHROOM3-205ENST00000481002 RNF113AO15541 343 aaKnown RBP14.96□□□□□ -0.01
SHROOM3-205ENST00000481002 MYO1BO43795 1136 aa14.96□□□□□ -0.01
SHROOM3-205ENST00000481002 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
SHROOM3-205ENST00000481002 POTEJP0CG39 1038 aa14.96□□□□□ -0.01
SHROOM3-205ENST00000481002 SDSP20132 328 aa14.96□□□□□ -0.01
SHROOM3-205ENST00000481002 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.01
SHROOM3-205ENST00000481002 RILPL2Q969X0 211 aa14.96□□□□□ -0.01
SHROOM3-205ENST00000481002 TDRD3Q9H7E2 651 aaKnown RBP14.96□□□□□ -0.01
SHROOM3-205ENST00000481002 ZNF70Q9UC06 446 aaPredicted RBP14.96□□□□□ -0.01
SHROOM3-205ENST00000481002 ASTN2O75129 1339 aaPredicted RBP14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 PITPNM2Q9BZ72 1349 aa14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 BAG3O95817 575 aa14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 CHGBP05060 677 aa14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 BTDP43251 543 aa14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 RHBDL3P58872 404 aa14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 SLFNL1Q499Z3 407 aa14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 BMP2KLQ5H9B9 411 aa14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 CDC42EP5Q6NZY7 148 aa14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 CERS3Q8IU89 383 aa14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 RFX7Q2KHR2 1363 aa14.95□□□□□ -0.02
SHROOM3-205ENST00000481002 FOCADQ5VW36 1801 aa14.94□□□□□ -0.02
SHROOM3-205ENST00000481002 PLCG2P16885 1265 aa14.94□□□□□ -0.02
SHROOM3-205ENST00000481002 ANGEL2Q5VTE6 544 aaKnown RBP14.94□□□□□ -0.02
SHROOM3-205ENST00000481002 FKBP1CQ5VVH2 108 aa14.94□□□□□ -0.02
SHROOM3-205ENST00000481002 APPBP2Q92624 585 aa14.94□□□□□ -0.02
SHROOM3-205ENST00000481002 NOL10Q9BSC4 688 aaKnown RBP14.94□□□□□ -0.02
SHROOM3-205ENST00000481002 USP40Q9NVE5 1235 aa14.94□□□□□ -0.02
SHROOM3-205ENST00000481002 AATFQ9NY61 560 aaKnown RBP eCLIP14.94□□□□□ -0.02
SHROOM3-205ENST00000481002 CLEC11AQ9Y240 323 aa14.94□□□□□ -0.02
SHROOM3-205ENST00000481002 CLRN2A0PK11 232 aa14.93□□□□□ -0.02
SHROOM3-205ENST00000481002 TOMM70O94826 608 aa14.93□□□□□ -0.02
SHROOM3-205ENST00000481002 DYNLL1P63167 89 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-205ENST00000481002 ZMYM1Q5SVZ6 1142 aa14.93□□□□□ -0.02
SHROOM3-205ENST00000481002 CHADLQ6NUI6 762 aa14.93□□□□□ -0.02
SHROOM3-205ENST00000481002 OSBP2Q969R2 916 aa14.93□□□□□ -0.02
SHROOM3-205ENST00000481002 DCPSQ96C86 337 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-205ENST00000481002 RIOK1Q9BRS2 568 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-205ENST00000481002 PUS7LQ9H0K6 701 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-205ENST00000481002 GGA3Q9NZ52 723 aa14.93□□□□□ -0.02
SHROOM3-205ENST00000481002 MAGEB6P1A0A0J9YX57 407 aa14.92□□□□□ -0.02
SHROOM3-205ENST00000481002 NPM3O75607 178 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-205ENST00000481002 APOBEC3FQ8IUX4 373 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-205ENST00000481002 MIGA1Q8NAN2 632 aa14.92□□□□□ -0.02
SHROOM3-205ENST00000481002 RBM46Q8TBY0 533 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-205ENST00000481002 IDI2Q9BXS1 227 aa14.92□□□□□ -0.02
SHROOM3-205ENST00000481002 HIP1O00291 1037 aa14.91□□□□□ -0.02
SHROOM3-205ENST00000481002 WDHD1O75717 1129 aaPredicted RBP14.91□□□□□ -0.02
SHROOM3-205ENST00000481002 TNFAIP1Q13829 316 aa14.91□□□□□ -0.02
SHROOM3-205ENST00000481002 CDC37L1Q7L3B6 337 aa14.91□□□□□ -0.02
SHROOM3-205ENST00000481002 FAM83AQ86UY5 434 aa14.91□□□□□ -0.02
SHROOM3-205ENST00000481002 SH3RF3Q8TEJ3 882 aaPredicted RBP14.91□□□□□ -0.02
SHROOM3-205ENST00000481002 VEZTQ9HBM0 779 aa14.91□□□□□ -0.02
SHROOM3-205ENST00000481002 HELLSQ9NRZ9 838 aa14.91□□□□□ -0.02
SHROOM3-205ENST00000481002 TMOD2Q9NZR1 351 aa14.91□□□□□ -0.02
SHROOM3-205ENST00000481002 MYH1P12882 1939 aa14.9□□□□□ -0.02
SHROOM3-205ENST00000481002 CACNB3P54284 484 aa14.9□□□□□ -0.02
SHROOM3-205ENST00000481002 MAP1SQ66K74 1059 aaPredicted RBP14.9□□□□□ -0.02
SHROOM3-205ENST00000481002 KRT26Q7Z3Y9 468 aa14.9□□□□□ -0.02
SHROOM3-205ENST00000481002 SULF1Q8IWU6 871 aa14.9□□□□□ -0.02
SHROOM3-205ENST00000481002 TEX11Q8IYF3 940 aa14.9□□□□□ -0.02
SHROOM3-205ENST00000481002 AIDAQ96BJ3 306 aa14.9□□□□□ -0.02
SHROOM3-205ENST00000481002 STRBPQ96SI9 672 aaKnown RBP14.9□□□□□ -0.02
SHROOM3-205ENST00000481002 FAM198AQ9UFP1 575 aa14.9□□□□□ -0.02
SHROOM3-205ENST00000481002 CNTNAP1P78357 1384 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 TRPM7Q96QT4 1865 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 TCP10L2B9ZVM9 353 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 M0R2C6 588 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 ENTPD3O75355 529 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 MBD4O95243 580 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 ITGBL1O95965 494 aaPredicted RBP14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 CHMLP26374 656 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 TNNI2P48788 182 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 NFIAQ12857 509 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 NMIQ13287 307 aaPredicted RBP14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 USP48Q86UV5 1035 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 LCORLQ8N3X6 602 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 SMC1BQ8NDV3 1235 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 FAM227BQ96M60 508 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 SEC62Q99442 399 aaKnown RBP14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 GLIS2Q9BZE0 524 aaPredicted RBP14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 CRNKL1Q9BZJ0 848 aaKnown RBP14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 DEFB129Q9H1M3 183 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 ARMT1Q9H993 441 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 DDX4Q9NQI0 724 aaKnown RBP14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 DIAPH3Q9NSV4 1193 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 PPP2R3BQ9Y5P8 575 aa14.89□□□□□ -0.03
SHROOM3-205ENST00000481002 BAZ2AQ9UIF9 1905 aaKnown RBP14.88□□□□□ -0.03
SHROOM3-205ENST00000481002 A0A0D9SFI3 127 aa14.88□□□□□ -0.03
SHROOM3-205ENST00000481002 GPAA1O43292 621 aa14.88□□□□□ -0.03
SHROOM3-205ENST00000481002 FSTL1Q12841 308 aa14.88□□□□□ -0.03
SHROOM3-205ENST00000481002 RASA3Q14644 834 aa14.88□□□□□ -0.03
SHROOM3-205ENST00000481002 MCMDC2Q4G0Z9 681 aa14.88□□□□□ -0.03
SHROOM3-205ENST00000481002 TGFBRAP1Q8WUH2 860 aa14.88□□□□□ -0.03
SHROOM3-205ENST00000481002 FAM151AQ8WW52 585 aa14.88□□□□□ -0.03
SHROOM3-205ENST00000481002 MKRN1Q9UHC7 482 aaKnown RBP14.88□□□□□ -0.03
SHROOM3-205ENST00000481002 SCAF8Q9UPN6 1271 aaKnown RBP14.88□□□□□ -0.03
SHROOM3-205ENST00000481002 ADM5C9JUS6 153 aa14.87□□□□□ -0.03
SHROOM3-205ENST00000481002 GNAT2P19087 354 aa14.87□□□□□ -0.03
SHROOM3-205ENST00000481002 CWC27Q6UX04 472 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms