RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 GUCY1B3Q02153 619 aa12.16□□□□□ -0.46
SIK3-210ENST00000480468 MAP9Q49MG5 647 aa12.16□□□□□ -0.46
SIK3-210ENST00000480468 MCMDC2Q4G0Z9 681 aa12.16□□□□□ -0.46
SIK3-210ENST00000480468 CNPY4Q8N129 248 aa12.16□□□□□ -0.46
SIK3-210ENST00000480468 SEC62Q99442 399 aaKnown RBP12.16□□□□□ -0.46
SIK3-210ENST00000480468 DESI2Q9BSY9 194 aa12.16□□□□□ -0.46
SIK3-210ENST00000480468 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.16□□□□□ -0.46
SIK3-210ENST00000480468 LRRC2Q9BYS8 371 aa12.16□□□□□ -0.46
SIK3-210ENST00000480468 TLR7Q9NYK1 1049 aaKnown RBP12.16□□□□□ -0.46
SIK3-210ENST00000480468 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
SIK3-210ENST00000480468 UTYO14607 1347 aa12.16□□□□□ -0.46
SIK3-210ENST00000480468 ZNF609O15014 1411 aa12.16□□□□□ -0.46
SIK3-210ENST00000480468 SLIT1O75093 1534 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 ANKRD65E5RJM6 399 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 EBAG9O00559 213 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 PHACTR2O75167 634 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 SLC39A14Q15043 492 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 KIF4BQ2VIQ3 1234 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 WWC2Q6AWC2 1192 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 SYNE3Q6ZMZ3 975 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 RASGRP2Q7LDG7 609 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 ANKRD24Q8TF21 1146 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 SUFUQ9UMX1 484 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 MROH7-TTC4A0A0A0MT08 1334 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 CDHR2Q9BYE9 1310 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 NRXN3Q9Y4C0 1643 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 ANKARQ7Z5J8 1434 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 PTPRUQ92729 1446 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 AKR1B15C9JRZ8 316 aaPredicted RBP12.15□□□□□ -0.46
SIK3-210ENST00000480468 PPP6R2O75170 966 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
SIK3-210ENST00000480468 MNAT1P51948 309 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 ADKP55263 362 aaKnown RBP12.15□□□□□ -0.46
SIK3-210ENST00000480468 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.46
SIK3-210ENST00000480468 KCNV1Q6PIU1 500 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 IRX2Q9BZI1 471 aaPredicted RBP12.15□□□□□ -0.46
SIK3-210ENST00000480468 RAI14Q9P0K7 980 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 CHPF2Q9P2E5 772 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 FAM169AQ9Y6X4 670 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 MAP3K15Q6ZN16 1313 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.46
SIK3-210ENST00000480468 C21orf2O43822 256 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 RHOXF2BP0C7M4 288 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 AMPHP49418 695 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 JMYQ8N9B5 988 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 ENOX1Q8TC92 643 aaKnown RBP12.14□□□□□ -0.47
SIK3-210ENST00000480468 SMARCC1Q92922 1105 aaPredicted RBP12.14□□□□□ -0.47
SIK3-210ENST00000480468 C8orf76Q96K31 380 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 NAPGQ99747 312 aaPredicted RBP12.14□□□□□ -0.47
SIK3-210ENST00000480468 RHOXF2Q9BQY4 288 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 NCOA5Q9HCD5 579 aaKnown RBP12.14□□□□□ -0.47
SIK3-210ENST00000480468 TTF2Q9UNY4 1162 aaKnown RBP12.14□□□□□ -0.47
SIK3-210ENST00000480468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.14□□□□□ -0.47
SIK3-210ENST00000480468 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
SIK3-210ENST00000480468 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 FECHP22830 423 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 EIF4A1P60842 406 aaKnown RBP12.14□□□□□ -0.47
SIK3-210ENST00000480468 DDR1Q08345 913 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 ZNF569Q5MCW4 686 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 PRPF38AQ8NAV1 312 aaKnown RBP12.14□□□□□ -0.47
SIK3-210ENST00000480468 LZTFL1Q9NQ48 299 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 DACH1Q9UI36 760 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 HPCAL4Q9UM19 191 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 KDM6AO15550 1401 aaPredicted RBP12.14□□□□□ -0.47
SIK3-210ENST00000480468 NEO1Q92859 1461 aa12.14□□□□□ -0.47
SIK3-210ENST00000480468 NR1I3Q14994 352 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 TTLL5Q6EMB2 1281 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 ISM2Q6H9L7 571 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 GBP6Q6ZN66 633 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 NUTM2AQ8IVF1 878 aaPredicted RBP12.13□□□□□ -0.47
SIK3-210ENST00000480468 IGSF22Q8N9C0 903 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 DSCC1Q9BVC3 393 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 ACEP12821 1306 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 NWD1Q149M9 1564 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 A0A1B0GTH6 734 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 TARSL2A2RTX5 802 aaKnown RBP12.13□□□□□ -0.47
SIK3-210ENST00000480468 LIG3P49916 1009 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 SETQ01105 290 aaPredicted RBP12.13□□□□□ -0.47
SIK3-210ENST00000480468 SATB1Q01826 763 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 PNOCQ13519 176 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 MTF1Q14872 753 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 RESP18Q5W5W9 173 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 RAD9BQ6WBX8 426 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 METTL16Q86W50 562 aaKnown RBP12.13□□□□□ -0.47
SIK3-210ENST00000480468 CEP120Q8N960 986 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 MLKLQ8NB16 471 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 COG1Q8WTW3 980 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 CCDC51Q96ER9 411 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 PLEKHA4Q9H4M7 779 aa12.13□□□□□ -0.47
SIK3-210ENST00000480468 SOWAHDA6NJG2 315 aa12.12□□□□□ -0.47
SIK3-210ENST00000480468 A6NNZ2 444 aa12.12□□□□□ -0.47
SIK3-210ENST00000480468 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
SIK3-210ENST00000480468 EIF2S2P20042 333 aaKnown RBP12.12□□□□□ -0.47
SIK3-210ENST00000480468 AMPD2Q01433 879 aa12.12□□□□□ -0.47
SIK3-210ENST00000480468 KIF23Q02241 960 aaPredicted RBP12.12□□□□□ -0.47
SIK3-210ENST00000480468 PPFIA1Q13136 1202 aa12.12□□□□□ -0.47
SIK3-210ENST00000480468 TUBB8Q3ZCM7 444 aa12.12□□□□□ -0.47
SIK3-210ENST00000480468 PLEKHO1Q53GL0 409 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms