RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 ARMT1Q9H993 441 aa20.18■□□□□ 0.82
SCAMP3-207ENST00000480219 RNF181Q9P0P0 153 aa20.18■□□□□ 0.82
SCAMP3-207ENST00000480219 ZNF541Q9H0D2 1346 aa20.18■□□□□ 0.82
SCAMP3-207ENST00000480219 PATL2C9JE40 543 aaKnown RBP20.17■□□□□ 0.82
SCAMP3-207ENST00000480219 PLCG2P16885 1265 aa20.17■□□□□ 0.82
SCAMP3-207ENST00000480219 RHBDL3P58872 404 aa20.17■□□□□ 0.82
SCAMP3-207ENST00000480219 NECTIN1Q15223 517 aa20.17■□□□□ 0.82
SCAMP3-207ENST00000480219 C9orf131Q5VYM1 1079 aa20.17■□□□□ 0.82
SCAMP3-207ENST00000480219 APOBEC3HQ6NTF7 200 aaKnown RBP20.17■□□□□ 0.82
SCAMP3-207ENST00000480219 GPC2Q8N158 579 aa20.17■□□□□ 0.82
SCAMP3-207ENST00000480219 U3KPZ7 1027 aaPredicted RBP20.17■□□□□ 0.82
SCAMP3-207ENST00000480219 UTRNP46939 3433 aa20.17■□□□□ 0.82
SCAMP3-207ENST00000480219 ADAMTSL1Q8N6G6 1762 aa20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 GSG1L2A8MUP6 293 aa20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 USP17L8P0C7I0 530 aa20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 HSPA4P34932 840 aa20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 BTDP43251 543 aa20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 DYNLL1P63167 89 aaKnown RBP20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 ZBED3Q96IU2 234 aaPredicted RBP20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 C22orf23Q9BZE7 217 aa20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 AATFQ9NY61 560 aaKnown RBP eCLIP20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 HDAC9Q9UKV0 1011 aa20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 ZBTB12Q9Y330 459 aaPredicted RBP20.16■□□□□ 0.82
SCAMP3-207ENST00000480219 F8W031 263 aaPredicted RBP20.15■□□□□ 0.82
SCAMP3-207ENST00000480219 NOL10Q9BSC4 688 aaKnown RBP20.15■□□□□ 0.82
SCAMP3-207ENST00000480219 CRNKL1Q9BZJ0 848 aaKnown RBP20.15■□□□□ 0.82
SCAMP3-207ENST00000480219 ATP8A2Q9NTI2 1148 aa20.15■□□□□ 0.82
SCAMP3-207ENST00000480219 MKRN1Q9UHC7 482 aaKnown RBP20.15■□□□□ 0.82
SCAMP3-207ENST00000480219 RBM8AQ9Y5S9 174 aaKnown RBP20.15■□□□□ 0.82
SCAMP3-207ENST00000480219 FOCADQ5VW36 1801 aa20.14■□□□□ 0.81
SCAMP3-207ENST00000480219 DDX60LQ5H9U9 1706 aaKnown RBP20.14■□□□□ 0.81
SCAMP3-207ENST00000480219 SCNN1DP51172 638 aa20.14■□□□□ 0.81
SCAMP3-207ENST00000480219 ANAPC15P60006 121 aa20.14■□□□□ 0.81
SCAMP3-207ENST00000480219 OGFOD1Q8N543 542 aa20.14■□□□□ 0.81
SCAMP3-207ENST00000480219 EPB41L4AQ9HCS5 686 aaPredicted RBP20.14■□□□□ 0.81
SCAMP3-207ENST00000480219 NPM3O75607 178 aaKnown RBP20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 FGAP02671 866 aa20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 GMPSP49915 693 aaPredicted RBP20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 TSGA10IPQ3SY00 556 aa20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 IFNL3Q8IZI9 196 aa20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 SH3RF3Q8TEJ3 882 aaPredicted RBP20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 TSHZ2Q9NRE2 1034 aa20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 CTNNA3Q9UI47 895 aa20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 SLC4A4Q9Y6R1 1079 aa20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 CDK5RAP2Q96SN8 1893 aa20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 LAMA4Q16363 1823 aa20.13■□□□□ 0.81
SCAMP3-207ENST00000480219 SPDYE2BA6NHP3 402 aa20.12■□□□□ 0.81
SCAMP3-207ENST00000480219 PRKAB2O43741 272 aa20.12■□□□□ 0.81
SCAMP3-207ENST00000480219 SPDYE6P0CI01 402 aa20.12■□□□□ 0.81
SCAMP3-207ENST00000480219 MCCP23508 829 aa20.12■□□□□ 0.81
SCAMP3-207ENST00000480219 CFAP100Q494V2 611 aa20.12■□□□□ 0.81
SCAMP3-207ENST00000480219 ECM29Q5VYK3 1845 aa20.11■□□□□ 0.81
SCAMP3-207ENST00000480219 CDC42EP5Q6NZY7 148 aa20.11■□□□□ 0.81
SCAMP3-207ENST00000480219 IDI2Q9BXS1 227 aa20.11■□□□□ 0.81
SCAMP3-207ENST00000480219 NACAP1Q9BZK3 213 aa20.11■□□□□ 0.81
SCAMP3-207ENST00000480219 DCP1AQ9NPI6 582 aaPredicted RBP20.11■□□□□ 0.81
SCAMP3-207ENST00000480219 SLC27A2O14975 620 aa20.1■□□□□ 0.81
SCAMP3-207ENST00000480219 WDHD1O75717 1129 aaPredicted RBP20.1■□□□□ 0.81
SCAMP3-207ENST00000480219 SBK1Q52WX2 424 aa20.1■□□□□ 0.81
SCAMP3-207ENST00000480219 CREB3L3Q68CJ9 461 aa20.1■□□□□ 0.81
SCAMP3-207ENST00000480219 SDR42E1Q8WUS8 393 aa20.1■□□□□ 0.81
SCAMP3-207ENST00000480219 L3MBTL3Q96JM7 780 aaPredicted RBP20.1■□□□□ 0.81
SCAMP3-207ENST00000480219 KIF2CQ99661 725 aa20.1■□□□□ 0.81
SCAMP3-207ENST00000480219 MYOZ2Q9NPC6 264 aa20.1■□□□□ 0.81
SCAMP3-207ENST00000480219 GPRC5DQ9NZD1 345 aa20.1■□□□□ 0.81
SCAMP3-207ENST00000480219 GJA3Q9Y6H8 435 aa20.1■□□□□ 0.81
SCAMP3-207ENST00000480219 CYP21A2P08686 494 aa20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 DLGAP5Q15398 846 aa20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 RNF20Q5VTR2 975 aa20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 FKBP1CQ5VVH2 108 aa20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 TEX11Q8IYF3 940 aa20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 PRMT6Q96LA8 375 aaPredicted RBP20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 USP40Q9NVE5 1235 aa20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 CNOT7Q9UIV1 285 aaKnown RBP20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 ANAPC4Q9UJX5 808 aa20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 PALD1Q9ULE6 856 aa20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 PCDHAC2Q9Y5I4 1007 aa20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 COL2A1P02458 1487 aaPredicted RBP20.09■□□□□ 0.81
SCAMP3-207ENST00000480219 NAV1Q8NEY1 1877 aa20.08■□□□□ 0.81
SCAMP3-207ENST00000480219 MICALL2Q8IY33 904 aa20.08■□□□□ 0.81
SCAMP3-207ENST00000480219 IL27Q8NEV9 243 aa20.08■□□□□ 0.81
SCAMP3-207ENST00000480219 NAPBQ9H115 298 aa20.08■□□□□ 0.81
SCAMP3-207ENST00000480219 SNX14Q9Y5W7 946 aa20.08■□□□□ 0.81
SCAMP3-207ENST00000480219 FLT1P17948 1338 aa20.07■□□□□ 0.8
SCAMP3-207ENST00000480219 SPDYE2Q495Y8 402 aa20.07■□□□□ 0.8
SCAMP3-207ENST00000480219 RASEFQ8IZ41 740 aa20.07■□□□□ 0.8
SCAMP3-207ENST00000480219 ARPP21Q9UBL0 812 aaPredicted RBP20.07■□□□□ 0.8
SCAMP3-207ENST00000480219 LAMB1P07942 1786 aa20.06■□□□□ 0.8
SCAMP3-207ENST00000480219 SHTN1A0MZ66 631 aa20.06■□□□□ 0.8
SCAMP3-207ENST00000480219 GLTPD2A6NH11 291 aa20.06■□□□□ 0.8
SCAMP3-207ENST00000480219 WNT10BO00744 389 aa20.06■□□□□ 0.8
SCAMP3-207ENST00000480219 DDNO94850 711 aaPredicted RBP20.06■□□□□ 0.8
SCAMP3-207ENST00000480219 APPP05067 770 aa20.06■□□□□ 0.8
SCAMP3-207ENST00000480219 IMMTQ16891 758 aaKnown RBP20.06■□□□□ 0.8
SCAMP3-207ENST00000480219 TGFBRAP1Q8WUH2 860 aa20.06■□□□□ 0.8
SCAMP3-207ENST00000480219 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
SCAMP3-207ENST00000480219 ROBO3Q96MS0 1386 aa20.06■□□□□ 0.8
SCAMP3-207ENST00000480219 WDR90Q96KV7 1748 aa20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 H7C1D1 291 aa20.05■□□□□ 0.8
SCAMP3-207ENST00000480219 ENTPD3O75355 529 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms