RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 CNTNAP4Q9C0A0 1308 aa12.53□□□□□ -0.4
CHD6-208ENST00000480022 CCDC151A5D8V7 595 aa12.52□□□□□ -0.4
CHD6-208ENST00000480022 SRGAP3O43295 1099 aa12.52□□□□□ -0.4
CHD6-208ENST00000480022 CEP57L1Q8IYX8 460 aa12.52□□□□□ -0.4
CHD6-208ENST00000480022 AOPEPQ8N6M6 819 aa12.52□□□□□ -0.4
CHD6-208ENST00000480022 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.4
CHD6-208ENST00000480022 A0A087WUV0 522 aaPredicted RBP12.52□□□□□ -0.41
CHD6-208ENST00000480022 RC3H1Q5TC82 1133 aaKnown RBP12.52□□□□□ -0.41
CHD6-208ENST00000480022 RSRC2Q7L4I2 434 aaKnown RBP12.52□□□□□ -0.41
CHD6-208ENST00000480022 JAKMIP1Q96N16 626 aaKnown RBP12.52□□□□□ -0.41
CHD6-208ENST00000480022 STK31Q9BXU1 1019 aa12.52□□□□□ -0.41
CHD6-208ENST00000480022 DDX21Q9NR30 783 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHD6-208ENST00000480022 CYP46A1Q9Y6A2 500 aa12.52□□□□□ -0.41
CHD6-208ENST00000480022 ANKRD65E5RJM6 399 aa12.52□□□□□ -0.41
CHD6-208ENST00000480022 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
CHD6-208ENST00000480022 MYL6BP14649 208 aa12.52□□□□□ -0.41
CHD6-208ENST00000480022 BRD3Q15059 726 aa12.52□□□□□ -0.41
CHD6-208ENST00000480022 LRP10Q7Z4F1 713 aa12.52□□□□□ -0.41
CHD6-208ENST00000480022 PDE11AQ9HCR9 933 aa12.52□□□□□ -0.41
CHD6-208ENST00000480022 LAMB4A4D0S4 1761 aa12.51□□□□□ -0.41
CHD6-208ENST00000480022 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
CHD6-208ENST00000480022 GNAI2P04899 355 aa12.51□□□□□ -0.41
CHD6-208ENST00000480022 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
CHD6-208ENST00000480022 NAT10Q9H0A0 1025 aaKnown RBP12.51□□□□□ -0.41
CHD6-208ENST00000480022 FANCGO15287 622 aa12.51□□□□□ -0.41
CHD6-208ENST00000480022 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
CHD6-208ENST00000480022 LRRC31Q6UY01 552 aa12.51□□□□□ -0.41
CHD6-208ENST00000480022 RPAINQ86UA6 219 aa12.51□□□□□ -0.41
CHD6-208ENST00000480022 MICALL1Q8N3F8 863 aa12.51□□□□□ -0.41
CHD6-208ENST00000480022 MPHOSPH8Q99549 860 aa12.51□□□□□ -0.41
CHD6-208ENST00000480022 TM6SF1Q9BZW5 370 aa12.51□□□□□ -0.41
CHD6-208ENST00000480022 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
CHD6-208ENST00000480022 ZNF827Q17R98 1081 aa12.5□□□□□ -0.41
CHD6-208ENST00000480022 AMIGO3Q86WK7 504 aa12.5□□□□□ -0.41
CHD6-208ENST00000480022 GOLGA1Q92805 767 aa12.5□□□□□ -0.41
CHD6-208ENST00000480022 XPO4Q9C0E2 1151 aaKnown RBP12.5□□□□□ -0.41
CHD6-208ENST00000480022 GNPATO15228 680 aa12.5□□□□□ -0.41
CHD6-208ENST00000480022 HMGB2P26583 209 aaKnown RBP12.5□□□□□ -0.41
CHD6-208ENST00000480022 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
CHD6-208ENST00000480022 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
CHD6-208ENST00000480022 HDXQ7Z353 690 aa12.5□□□□□ -0.41
CHD6-208ENST00000480022 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
CHD6-208ENST00000480022 FAM107BQ9H098 131 aa12.5□□□□□ -0.41
CHD6-208ENST00000480022 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
CHD6-208ENST00000480022 C4BP0C0L5 1744 aa12.5□□□□□ -0.41
CHD6-208ENST00000480022 PPFIA4O75335 1185 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 IL6STP40189 918 aaPredicted RBP12.49□□□□□ -0.41
CHD6-208ENST00000480022 TXLNAP40222 546 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 MNAT1P51948 309 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 MCM6Q14566 821 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 DNAJC21Q5F1R6 531 aaKnown RBP12.49□□□□□ -0.41
CHD6-208ENST00000480022 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 G2E3Q7L622 706 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 EGFL6Q8IUX8 553 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
CHD6-208ENST00000480022 AKAP2Q9Y2D5 859 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 FAN1Q9Y2M0 1017 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 RPS6KA4O75676 772 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 IFIT2P09913 472 aaKnown RBP12.49□□□□□ -0.41
CHD6-208ENST00000480022 USP8P40818 1118 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 CCT4P50991 539 aaKnown RBP12.49□□□□□ -0.41
CHD6-208ENST00000480022 ADCK5Q3MIX3 580 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 IFNKQ9P0W0 207 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
CHD6-208ENST00000480022 ZNF330Q9Y3S2 320 aaPredicted RBP12.49□□□□□ -0.41
CHD6-208ENST00000480022 ADCY9O60503 1353 aa12.48□□□□□ -0.41
CHD6-208ENST00000480022 MAP4K4O95819 1239 aaPredicted RBP12.48□□□□□ -0.41
CHD6-208ENST00000480022 SLC4A10Q6U841 1118 aa12.48□□□□□ -0.41
CHD6-208ENST00000480022 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
CHD6-208ENST00000480022 MRFAP1Q9Y605 127 aa12.48□□□□□ -0.41
CHD6-208ENST00000480022 RREB1Q92766 1687 aa12.48□□□□□ -0.41
CHD6-208ENST00000480022 ZSCAN12O43309 604 aa12.48□□□□□ -0.41
CHD6-208ENST00000480022 XAGE3Q8WTP9 111 aa12.48□□□□□ -0.41
CHD6-208ENST00000480022 RTCBQ9Y3I0 505 aaKnown RBP12.48□□□□□ -0.41
CHD6-208ENST00000480022 TAF1LQ8IZX4 1826 aa12.48□□□□□ -0.41
CHD6-208ENST00000480022 A0A087WWV3 80 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 AIMP1Q12904 312 aaKnown RBP12.47□□□□□ -0.41
CHD6-208ENST00000480022 FLIIQ13045 1269 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 TRDNQ13061 729 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 COPS6Q7L5N1 327 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 CFAP45Q9UL16 551 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 CCDC189A1A4V9 331 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 KINO60870 393 aaKnown RBP12.47□□□□□ -0.41
CHD6-208ENST00000480022 ERLIN2O94905 339 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 BEND6Q5SZJ8 279 aaPredicted RBP12.47□□□□□ -0.41
CHD6-208ENST00000480022 CWC27Q6UX04 472 aaKnown RBP12.47□□□□□ -0.41
CHD6-208ENST00000480022 ERC1Q8IUD2 1116 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 CCAR1Q8IX12 1150 aaKnown RBP12.47□□□□□ -0.41
CHD6-208ENST00000480022 CNTROBQ8N137 903 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 CNNM3Q8NE01 707 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 N4BP1O75113 896 aaKnown RBP12.47□□□□□ -0.41
CHD6-208ENST00000480022 ATP8B2P98198 1209 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 HSP90B2PQ58FF3 399 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 HSP90AB3PQ58FF7 597 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 PRPF40BQ6NWY9 871 aaKnown RBP12.47□□□□□ -0.41
CHD6-208ENST00000480022 CCDC73Q6ZRK6 1079 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 FCHSD1Q86WN1 690 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 FAM71BQ8TC56 605 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms