RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 MCTP2Q6DN12 878 aa15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 PACS2Q86VP3 889 aa15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 CKAP2LQ8IYA6 745 aa15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 PPP1R13BQ96KQ4 1090 aa15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 ZC3H4Q9UPT8 1303 aaKnown RBP15.23■□□□□ 0.03
CNKSR3-204ENST00000479339 NFKBIEO00221 500 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 LMNB1P20700 586 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 LMAN1P49257 510 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 AK2P54819 239 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 IQCB1Q15051 598 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 CT47A1Q5JQC4 288 aaPredicted RBP15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 CC2D1AQ6P1N0 951 aaPredicted RBP15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 MSL3Q8N5Y2 521 aaKnown RBP15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 DRC1Q96MC2 740 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 DNAJC25Q9H1X3 360 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 DDX21Q9NR30 783 aaKnown RBP eCLIP15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 DNAI1Q9UI46 699 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 ADAM21Q9UKJ8 722 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 RIC1Q4ADV7 1423 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 UBN2Q6ZU65 1347 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 C21orf2O43822 256 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 PDCP20941 246 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 PRELPP51888 382 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 PRPF40BQ6NWY9 871 aaKnown RBP15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 GPR161Q8N6U8 529 aaKnown RBP15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 MBIPQ9NS73 344 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 NUP98P52948 1817 aa15.22■□□□□ 0.03
CNKSR3-204ENST00000479339 SBF1O95248 1867 aa15.21■□□□□ 0.03
CNKSR3-204ENST00000479339 CTAGE5O15320 804 aa15.21■□□□□ 0.03
CNKSR3-204ENST00000479339 ANXA1P04083 346 aa15.21■□□□□ 0.03
CNKSR3-204ENST00000479339 CORO7P57737 925 aa15.21■□□□□ 0.03
CNKSR3-204ENST00000479339 LRRFIP1Q32MZ4 808 aaKnown RBP15.21■□□□□ 0.03
CNKSR3-204ENST00000479339 MMS22LQ6ZRQ5 1243 aa15.21■□□□□ 0.03
CNKSR3-204ENST00000479339 RUFY3Q7L099 469 aa15.21■□□□□ 0.03
CNKSR3-204ENST00000479339 ARFGAP3Q9NP61 516 aa15.21■□□□□ 0.03
CNKSR3-204ENST00000479339 STAP2Q9UGK3 403 aa15.21■□□□□ 0.03
CNKSR3-204ENST00000479339 LTBP3Q9NS15 1303 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 GPTP24298 496 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 ETF1P62495 437 aaKnown RBP15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 ZRSR1Q15695 479 aaKnown RBP15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 STX1AQ16623 288 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 PARP10Q53GL7 1025 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 SOGA3Q5TF21 947 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 SUSD4Q5VX71 490 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 E4F1Q66K89 784 aaPredicted RBP15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 XAGE3Q8WTP9 111 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 NECTIN2Q92692 538 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 CXorf56Q9H5V9 222 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 MED4Q9NPJ6 270 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 ARFGEF2Q9Y6D5 1785 aa15.21■□□□□ 0.02
CNKSR3-204ENST00000479339 ABCC12Q96J65 1359 aa15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 EIF3CLB5ME19 914 aaKnown RBP15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 APBB1O00213 710 aa15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 HDGFL1Q5TGJ6 251 aa15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 COPS6Q7L5N1 327 aa15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 EFCAB13Q8IY85 973 aa15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 GPATCH11Q8N954 259 aa15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 C7orf43Q8WVR3 580 aa15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 EIF3CQ99613 913 aaKnown RBP15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 FAM107BQ9H098 131 aa15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 SNX14Q9Y5W7 946 aa15.2■□□□□ 0.02
CNKSR3-204ENST00000479339 VPS37CA5D8V6 355 aaPredicted RBP15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 SASH3O75995 380 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 NTSR2O95665 410 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 ARID5BQ14865 1188 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 CRY2Q49AN0 593 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 ERFEQ4G0M1 354 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 NUTM1Q86Y26 1132 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 TOMM22Q9NS69 142 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 ZNF219Q9P2Y4 722 aaPredicted RBP15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 SLX4Q8IY92 1834 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 SATB1Q01826 763 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 HSP90AB3PQ58FF7 597 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 PPP1R42Q7Z4L9 355 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 LRRN4CLQ8ND94 238 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 ZSCAN16Q9H4T2 348 aaPredicted RBP15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 CHPF2Q9P2E5 772 aa15.19■□□□□ 0.02
CNKSR3-204ENST00000479339 CCDC196A0A1B0GTZ2 297 aa15.18■□□□□ 0.02
CNKSR3-204ENST00000479339 BECN2A8MW95 431 aa15.18■□□□□ 0.02
CNKSR3-204ENST00000479339 VPS53Q5VIR6 699 aa15.18■□□□□ 0.02
CNKSR3-204ENST00000479339 SPATA32Q96LK8 384 aa15.18■□□□□ 0.02
CNKSR3-204ENST00000479339 TACO1Q9BSH4 297 aaKnown RBP15.18■□□□□ 0.02
CNKSR3-204ENST00000479339 LRRCC1Q9C099 1032 aa15.18■□□□□ 0.02
CNKSR3-204ENST00000479339 NMRK2Q9NPI5 230 aa15.18■□□□□ 0.02
CNKSR3-204ENST00000479339 TNRC6CQ9HCJ0 1690 aaKnown RBP15.18■□□□□ 0.02
CNKSR3-204ENST00000479339 SEC31AO94979 1220 aaKnown RBP15.17■□□□□ 0.02
CNKSR3-204ENST00000479339 SMC2O95347 1197 aa15.17■□□□□ 0.02
CNKSR3-204ENST00000479339 ALDH1B1P30837 517 aa15.17■□□□□ 0.02
CNKSR3-204ENST00000479339 RILPL2Q969X0 211 aa15.17■□□□□ 0.02
CNKSR3-204ENST00000479339 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
CNKSR3-204ENST00000479339 FER1L6Q2WGJ9 1857 aa15.17■□□□□ 0.02
CNKSR3-204ENST00000479339 AIMP1Q12904 312 aaKnown RBP15.17■□□□□ 0.02
CNKSR3-204ENST00000479339 FUT8Q9BYC5 575 aa15.17■□□□□ 0.02
CNKSR3-204ENST00000479339 TAOK3Q9H2K8 898 aa15.17■□□□□ 0.02
CNKSR3-204ENST00000479339 ZCCHC17Q9NP64 241 aaKnown RBP15.17■□□□□ 0.02
CNKSR3-204ENST00000479339 KCNA4P22459 653 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 HOXA10P31260 410 aaPredicted RBP15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 USP8P40818 1118 aa15.16■□□□□ 0.02
CNKSR3-204ENST00000479339 EVCP57679 992 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms