RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 GLRX3O76003 335 aaKnown RBP10.08□□□□□ -0.8
VPS45-208ENST00000478999 ALDH1A1P00352 501 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 ITGA6P23229 1130 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 CHMLP26374 656 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 PRKG1Q13976 671 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 USP17L1Q7RTZ2 530 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 PODNQ7Z5L7 613 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 IFNL1Q8IU54 200 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 OGFOD1Q8N543 542 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 TTLL11Q8NHH1 800 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 TNPO1Q92973 898 aaKnown RBP10.08□□□□□ -0.8
VPS45-208ENST00000478999 ANKRD2Q9GZV1 360 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 BSDC1Q9NW68 430 aaPredicted RBP10.08□□□□□ -0.8
VPS45-208ENST00000478999 C9orf78Q9NZ63 289 aaPredicted RBP10.08□□□□□ -0.8
VPS45-208ENST00000478999 FZD1Q9UP38 647 aa10.08□□□□□ -0.8
VPS45-208ENST00000478999 RANBP2P49792 3224 aaKnown RBP10.08□□□□□ -0.8
VPS45-208ENST00000478999 HIP1O00291 1037 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 IGF2BP3O00425 579 aaKnown RBP eCLIP10.07□□□□□ -0.8
VPS45-208ENST00000478999 NF2P35240 595 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 GCKRQ14397 625 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 LDLRAD1Q5T700 205 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 CHRDL2Q6WN34 429 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 CLASRPQ8N2M8 674 aaKnown RBP10.07□□□□□ -0.8
VPS45-208ENST00000478999 RUFY2Q8WXA3 655 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 ERO1AQ96HE7 468 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 INTS4Q96HW7 963 aaKnown RBP10.07□□□□□ -0.8
VPS45-208ENST00000478999 ZNF333Q96JL9 665 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 MINPP1Q9UNW1 487 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 LEMD3Q9Y2U8 911 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 MYO3BQ8WXR4 1341 aa10.07□□□□□ -0.8
VPS45-208ENST00000478999 FSD2A1L4K1 749 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 GOLGA6L3A6NEY3 463 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 MANSC4A6NHS7 340 aaPredicted RBP10.06□□□□□ -0.8
VPS45-208ENST00000478999 TRIM6-TRIM34B2RNG4 842 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 H7C1W4 665 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 GRM8O00222 908 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 WNT10BO00744 389 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 IFIT5Q13325 482 aaKnown RBP10.06□□□□□ -0.8
VPS45-208ENST00000478999 ARMC9Q7Z3E5 817 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 TICAM2Q86XR7 235 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 TMEM106CQ9BVX2 250 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 EFCC1Q9HA90 598 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
VPS45-208ENST00000478999 ANGEL1Q9UNK9 670 aaKnown RBP10.06□□□□□ -0.8
VPS45-208ENST00000478999 ZNF804BA4D1E1 1349 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 RAD50Q92878 1312 aa10.06□□□□□ -0.8
VPS45-208ENST00000478999 SSC5DA1L4H1 1573 aa10.05□□□□□ -0.8
VPS45-208ENST00000478999 NPM3O75607 178 aaKnown RBP10.05□□□□□ -0.8
VPS45-208ENST00000478999 CD2BP2O95400 341 aaKnown RBP10.05□□□□□ -0.8
VPS45-208ENST00000478999 CYP2E1P05181 493 aaPredicted RBP10.05□□□□□ -0.8
VPS45-208ENST00000478999 NBPF7P0C2Y1 421 aaPredicted RBP10.05□□□□□ -0.8
VPS45-208ENST00000478999 CRHR2Q13324 411 aa10.05□□□□□ -0.8
VPS45-208ENST00000478999 SPRYD3Q8NCJ5 442 aa10.05□□□□□ -0.8
VPS45-208ENST00000478999 PI4K2BQ8TCG2 481 aa10.05□□□□□ -0.8
VPS45-208ENST00000478999 MXD3Q9BW11 206 aa10.05□□□□□ -0.8
VPS45-208ENST00000478999 COA1Q9GZY4 146 aa10.05□□□□□ -0.8
VPS45-208ENST00000478999 ECHDC1Q9NTX5 307 aa10.05□□□□□ -0.8
VPS45-208ENST00000478999 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.05□□□□□ -0.8
VPS45-208ENST00000478999 A0A0C4DFX4 3053 aa10.05□□□□□ -0.8
VPS45-208ENST00000478999 CUL9Q8IWT3 2517 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 RFX7Q2KHR2 1363 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 SASH1O94885 1247 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 MRE11P49959 708 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 INHBEP58166 350 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 OS9Q13438 667 aaPredicted RBP10.04□□□□□ -0.8
VPS45-208ENST00000478999 CUL4AQ13619 759 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 CCDC57Q2TAC2 916 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 KIAA1211Q6ZU35 1233 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 ZNF804AQ7Z570 1209 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 WNK4Q96J92 1243 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 CLMNQ96JQ2 1002 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 PLA2G12BQ9BX93 195 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 ANO2Q9NQ90 1003 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 CNNM1Q9NRU3 951 aa10.04□□□□□ -0.8
VPS45-208ENST00000478999 WTIPA6NIX2 430 aaPredicted RBP10.03□□□□□ -0.8
VPS45-208ENST00000478999 SGSM2O43147 1006 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
VPS45-208ENST00000478999 ZBTB48P10074 688 aaPredicted RBP10.03□□□□□ -0.8
VPS45-208ENST00000478999 PDIA4P13667 645 aaKnown RBP10.03□□□□□ -0.8
VPS45-208ENST00000478999 HSPA4P34932 840 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 GTF2IP78347 998 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 SP3Q02447 781 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 CHRNDQ07001 517 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 KLHL40Q2TBA0 621 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 DACT2Q5SW24 774 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 STRIP1Q5VSL9 837 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 TTLL5Q6EMB2 1281 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 RILPL2Q969X0 211 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 EVI5LQ96CN4 794 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 PTCH2Q9Y6C5 1203 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
VPS45-208ENST00000478999 COL1A1P02452 1464 aaPredicted RBP10.03□□□□□ -0.8
VPS45-208ENST00000478999 TAF5LO75529 589 aa10.02□□□□□ -0.81
VPS45-208ENST00000478999 BAG4O95429 457 aaKnown RBP10.02□□□□□ -0.81
VPS45-208ENST00000478999 IFIT2P09913 472 aaKnown RBP10.02□□□□□ -0.81
VPS45-208ENST00000478999 GJA5P36382 358 aa10.02□□□□□ -0.81
VPS45-208ENST00000478999 NEK4P51957 841 aa10.02□□□□□ -0.81
VPS45-208ENST00000478999 G3BP1Q13283 466 aaKnown RBP eCLIP10.02□□□□□ -0.81
VPS45-208ENST00000478999 MAP3K11Q16584 847 aa10.02□□□□□ -0.81
VPS45-208ENST00000478999 SLC4A8Q2Y0W8 1093 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms