RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 FBXL6Q8N531 539 aa2.82□□□□□ -1.96
SRRM1-211ENST00000478890 TMEM102Q8N9M5 508 aaPredicted RBP2.82□□□□□ -1.96
SRRM1-211ENST00000478890 YIPF2Q9BWQ6 316 aa2.82□□□□□ -1.96
SRRM1-211ENST00000478890 CHRDQ9H2X0 955 aa2.82□□□□□ -1.96
SRRM1-211ENST00000478890 ZCCHC4Q9H5U6 513 aa2.82□□□□□ -1.96
SRRM1-211ENST00000478890 CYP4F12Q9HCS2 524 aa2.82□□□□□ -1.96
SRRM1-211ENST00000478890 CCDC87Q9NVE4 849 aa2.82□□□□□ -1.96
SRRM1-211ENST00000478890 SRRDQ9UH36 339 aa2.82□□□□□ -1.96
SRRM1-211ENST00000478890 HIF3AQ9Y2N7 669 aa2.82□□□□□ -1.96
SRRM1-211ENST00000478890 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.82□□□□□ -1.96
SRRM1-211ENST00000478890 METTL12A8MUP2 240 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 CYP26A1O43174 497 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 F13BP05160 661 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 NEFLP07196 543 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 CELA3BP08861 270 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 RAB6AP20340 208 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 MAP4P27816 1152 aaKnown RBP2.81□□□□□ -1.96
SRRM1-211ENST00000478890 PUM1Q14671 1186 aaKnown RBP eCLIP2.81□□□□□ -1.961e-10■■■□□ 15.2
SRRM1-211ENST00000478890 NFKBIBQ15653 356 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 HP1BP3Q5SSJ5 553 aaPredicted RBP2.81□□□□□ -1.96
SRRM1-211ENST00000478890 DDX54Q8TDD1 881 aaKnown RBP2.81□□□□□ -1.96
SRRM1-211ENST00000478890 LIN7BQ9HAP6 207 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 LATS2Q9NRM7 1088 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 RAD18Q9NS91 495 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 RTEL1Q9NZ71 1219 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 SOX13Q9UN79 622 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 AP4E1Q9UPM8 1137 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 USTQ9Y2C2 406 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 MYRFQ9Y2G1 1151 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 CNTNAP4Q9C0A0 1308 aa2.81□□□□□ -1.96
SRRM1-211ENST00000478890 NFKBIEO00221 500 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 FZD6O60353 706 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 EIF4EBP3O60516 100 aaPredicted RBP2.8□□□□□ -1.96
SRRM1-211ENST00000478890 KRT1P04264 644 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 SERPINB4P48594 390 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 HNRNPUQ00839 825 aaKnown RBP eCLIP2.8□□□□□ -1.96
SRRM1-211ENST00000478890 PDE3BQ13370 1112 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 PDE3AQ14432 1141 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 SGO2Q562F6 1265 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 HGSNATQ68CP4 663 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 PAOXQ6QHF9 649 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 GJD3Q8N144 294 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 NXPE3Q969Y0 559 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 CORO1BQ9BR76 489 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 EHD4Q9H223 541 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 C1orf115Q9H7X2 142 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 SLC5A6Q9Y289 635 aa2.8□□□□□ -1.96
SRRM1-211ENST00000478890 LOC100289279A0A1B0GTE1 492 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 FAM95CA0A1B0GW59 222 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 SOX1O00570 391 aaPredicted RBP2.79□□□□□ -1.96
SRRM1-211ENST00000478890 GADD45BO75293 160 aaPredicted RBP2.79□□□□□ -1.96
SRRM1-211ENST00000478890 CYP11A1P05108 521 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 ESRRAP11474 423 aaPredicted RBP2.79□□□□□ -1.96
SRRM1-211ENST00000478890 PCDH1Q08174 1060 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 KCNA10Q16322 511 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 AKAP4Q5JQC9 854 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 DYMQ7RTS9 669 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 VN1R5Q7Z5H4 357 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 ZSWIM9Q86XI8 627 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 STK11IPQ8N1F8 1099 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 NAF1Q96HR8 494 aaKnown RBP2.79□□□□□ -1.96
SRRM1-211ENST00000478890 TBC1D32Q96NH3 1257 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 BHLHE41Q9C0J9 482 aaPredicted RBP2.79□□□□□ -1.96
SRRM1-211ENST00000478890 CLEC4MQ9H2X3 399 aaPredicted RBP2.79□□□□□ -1.96
SRRM1-211ENST00000478890 ZFYVE1Q9HBF4 777 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 ZFYVE28Q9HCC9 887 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 NPHS2Q9NP85 383 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 BIN2Q9UBW5 565 aaPredicted RBP2.79□□□□□ -1.96
SRRM1-211ENST00000478890 EGFL7Q9UHF1 273 aa2.79□□□□□ -1.96
SRRM1-211ENST00000478890 A0A096LPE4 126 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 A0A1W2PPZ6 126 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 ZNF503-AS2A6NEH8 195 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 ICMTO60725 284 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 CPNE3O75131 537 aaKnown RBP2.78□□□□□ -1.96
SRRM1-211ENST00000478890 DRD2P14416 443 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 INSRRP14616 1297 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 NPR3P17342 541 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 MAOBP27338 520 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 HMGA2P52926 109 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 PDE4CQ08493 712 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 POU4F3Q15319 338 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 SPATS1Q496A3 300 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 EXOSC6Q5RKV6 272 aaKnown RBP2.78□□□□□ -1.96
SRRM1-211ENST00000478890 PEAR1Q5VY43 1037 aaPredicted RBP2.78□□□□□ -1.96
SRRM1-211ENST00000478890 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 FBLIM1Q8WUP2 373 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 SORCS2Q96PQ0 1159 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 SOX17Q9H6I2 414 aaPredicted RBP2.78□□□□□ -1.96
SRRM1-211ENST00000478890 PIDD1Q9HB75 910 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 LRRC4CQ9HCJ2 640 aa2.78□□□□□ -1.96
SRRM1-211ENST00000478890 A0A1W2PP55 124 aa2.77□□□□□ -1.97
SRRM1-211ENST00000478890 SUPT5HO00267 1087 aaKnown RBP2.77□□□□□ -1.97
SRRM1-211ENST00000478890 ADH5P11766 374 aa2.77□□□□□ -1.97
SRRM1-211ENST00000478890 GRIA4P48058 902 aa2.77□□□□□ -1.97
SRRM1-211ENST00000478890 ORC1Q13415 861 aa2.77□□□□□ -1.97
SRRM1-211ENST00000478890 MAP7Q14244 749 aa2.77□□□□□ -1.97
SRRM1-211ENST00000478890 SPRED3Q2MJR0 410 aa2.77□□□□□ -1.97
SRRM1-211ENST00000478890 DUSP27Q5VZP5 1158 aa2.77□□□□□ -1.97
SRRM1-211ENST00000478890 USPL1Q5W0Q7 1092 aa2.77□□□□□ -1.97
SRRM1-211ENST00000478890 PHLDB3Q6NSJ2 640 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms