RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 PDE3BQ13370 1112 aa6.59□□□□□ -1.35
VLDLR-204ENST00000478776 PHLDB3Q6NSJ2 640 aa6.59□□□□□ -1.35
VLDLR-204ENST00000478776 ZNF576Q9H609 170 aa6.59□□□□□ -1.35
VLDLR-204ENST00000478776 H3BRB1 525 aa6.58□□□□□ -1.36
VLDLR-204ENST00000478776 ICMTO60725 284 aa6.58□□□□□ -1.36
VLDLR-204ENST00000478776 CPNE3O75131 537 aaKnown RBP6.58□□□□□ -1.36
VLDLR-204ENST00000478776 USPL1Q5W0Q7 1092 aa6.58□□□□□ -1.36
VLDLR-204ENST00000478776 POU5F2Q8N7G0 328 aa6.58□□□□□ -1.36
VLDLR-204ENST00000478776 TMC1Q8TDI8 760 aa6.58□□□□□ -1.36
VLDLR-204ENST00000478776 TUT1Q9H6E5 874 aaKnown RBP6.58□□□□□ -1.36
VLDLR-204ENST00000478776 C1GALT1Q9NS00 363 aa6.58□□□□□ -1.36
VLDLR-204ENST00000478776 EGFL7Q9UHF1 273 aa6.58□□□□□ -1.36
VLDLR-204ENST00000478776 CARNS1A5YM72 827 aa6.57□□□□□ -1.36
VLDLR-204ENST00000478776 DYNC1LI2O43237 492 aaPredicted RBP6.57□□□□□ -1.36
VLDLR-204ENST00000478776 GADD45BO75293 160 aaPredicted RBP6.57□□□□□ -1.36
VLDLR-204ENST00000478776 C8AP07357 584 aa6.57□□□□□ -1.36
VLDLR-204ENST00000478776 ITPKAP23677 461 aa6.57□□□□□ -1.36
VLDLR-204ENST00000478776 ARHGAP27Q6ZUM4 889 aa6.57□□□□□ -1.36
VLDLR-204ENST00000478776 BCL7CQ8WUZ0 217 aaPredicted RBP6.57□□□□□ -1.36
VLDLR-204ENST00000478776 MISP3Q96FF7 219 aa6.57□□□□□ -1.36
VLDLR-204ENST00000478776 WDR18Q9BV38 432 aa6.57□□□□□ -1.36
VLDLR-204ENST00000478776 ATXN3LQ9H3M9 355 aa6.57□□□□□ -1.36
VLDLR-204ENST00000478776 GSX1Q9H4S2 264 aaPredicted RBP6.57□□□□□ -1.36
VLDLR-204ENST00000478776 NPHS2Q9NP85 383 aa6.57□□□□□ -1.36
VLDLR-204ENST00000478776 SYNGAP1Q96PV0 1343 aa6.56□□□□□ -1.36
VLDLR-204ENST00000478776 PTPN12Q05209 780 aaKnown RBP6.56□□□□□ -1.36
VLDLR-204ENST00000478776 COL19A1Q14993 1142 aa6.56□□□□□ -1.36
VLDLR-204ENST00000478776 SEZ6L2Q6UXD5 910 aa6.56□□□□□ -1.36
VLDLR-204ENST00000478776 ZC3H12CQ9C0D7 883 aaKnown RBP6.56□□□□□ -1.36
VLDLR-204ENST00000478776 PPP1R9AQ9ULJ8 1098 aa6.56□□□□□ -1.36
VLDLR-204ENST00000478776 RNGTTO60942 597 aaKnown RBP6.55□□□□□ -1.36
VLDLR-204ENST00000478776 FAM87AP0C7U9 286 aa6.55□□□□□ -1.36
VLDLR-204ENST00000478776 LIG1P18858 919 aa6.55□□□□□ -1.36
VLDLR-204ENST00000478776 ORC1Q13415 861 aa6.55□□□□□ -1.36
VLDLR-204ENST00000478776 ZNF792Q3KQV3 632 aa6.55□□□□□ -1.36
VLDLR-204ENST00000478776 RPS26P11Q5JNZ5 115 aaPredicted RBP6.55□□□□□ -1.36
VLDLR-204ENST00000478776 ZNF574Q6ZN55 896 aaPredicted RBP6.55□□□□□ -1.36
VLDLR-204ENST00000478776 NETO1Q8TDF5 533 aa6.55□□□□□ -1.36
VLDLR-204ENST00000478776 PPP4R2Q9NY27 417 aa6.55□□□□□ -1.36
VLDLR-204ENST00000478776 TRAK1Q9UPV9 953 aa6.55□□□□□ -1.36
VLDLR-204ENST00000478776 ZNF157P51786 506 aaPredicted RBP6.54□□□□□ -1.36
VLDLR-204ENST00000478776 ID3Q02535 119 aa6.54□□□□□ -1.36
VLDLR-204ENST00000478776 BNIP3Q12983 259 aa6.54□□□□□ -1.36
VLDLR-204ENST00000478776 SPRED2Q7Z698 418 aa6.54□□□□□ -1.36
VLDLR-204ENST00000478776 SMYD4Q8IYR2 804 aaPredicted RBP6.54□□□□□ -1.36
VLDLR-204ENST00000478776 CCDC74AQ96AQ1 378 aa6.54□□□□□ -1.36
VLDLR-204ENST00000478776 TMEM238LA0A1B0GVL6 79 aa6.53□□□□□ -1.36
VLDLR-204ENST00000478776 TMPRSS2O15393 492 aa6.53□□□□□ -1.36
VLDLR-204ENST00000478776 JAG1P78504 1218 aa6.53□□□□□ -1.36
VLDLR-204ENST00000478776 PPP2R3AQ06190 1150 aa6.53□□□□□ -1.36
VLDLR-204ENST00000478776 CDK5R2Q13319 367 aa6.53□□□□□ -1.36
VLDLR-204ENST00000478776 FANCD2OSQ96PS1 177 aa6.53□□□□□ -1.36
VLDLR-204ENST00000478776 CITED4Q96RK1 184 aa6.53□□□□□ -1.36
VLDLR-204ENST00000478776 DNAJC25Q9H1X3 360 aa6.53□□□□□ -1.36
VLDLR-204ENST00000478776 CCDC86Q9H6F5 360 aaKnown RBP6.53□□□□□ -1.36
VLDLR-204ENST00000478776 SSU72Q9NP77 194 aaKnown RBP6.53□□□□□ -1.36
VLDLR-204ENST00000478776 CRIM1Q9NZV1 1036 aa6.53□□□□□ -1.36
VLDLR-204ENST00000478776 PAPLNO95428 1278 aa6.52□□□□□ -1.37
VLDLR-204ENST00000478776 SERPINB4P48594 390 aa6.52□□□□□ -1.37
VLDLR-204ENST00000478776 PRPF40BQ6NWY9 871 aaKnown RBP6.52□□□□□ -1.37
VLDLR-204ENST00000478776 PLD6Q8N2A8 252 aaKnown RBP6.52□□□□□ -1.37
VLDLR-204ENST00000478776 FAM181AQ8N9Y4 354 aa6.52□□□□□ -1.37
VLDLR-204ENST00000478776 PI4K2BQ8TCG2 481 aa6.52□□□□□ -1.37
VLDLR-204ENST00000478776 WDR89Q96FK6 387 aaPredicted RBP6.52□□□□□ -1.37
VLDLR-204ENST00000478776 ARID3AQ99856 593 aa6.52□□□□□ -1.37
VLDLR-204ENST00000478776 RC3H2Q9HBD1 1191 aaKnown RBP6.52□□□□□ -1.37
VLDLR-204ENST00000478776 ABCB6Q9NP58 842 aa6.52□□□□□ -1.37
VLDLR-204ENST00000478776 VAV3Q9UKW4 847 aa6.52□□□□□ -1.37
VLDLR-204ENST00000478776 USTQ9Y2C2 406 aa6.52□□□□□ -1.37
VLDLR-204ENST00000478776 EIF1AYO14602 144 aaKnown RBP6.51□□□□□ -1.37
VLDLR-204ENST00000478776 PKN1Q16512 942 aa6.51□□□□□ -1.37
VLDLR-204ENST00000478776 DTHD1Q6ZMT9 781 aa6.51□□□□□ -1.37
VLDLR-204ENST00000478776 KCNB2Q92953 911 aa6.51□□□□□ -1.37
VLDLR-204ENST00000478776 FAM129BQ96TA1 746 aa6.51□□□□□ -1.37
VLDLR-204ENST00000478776 NIF3L1Q9GZT8 377 aa6.51□□□□□ -1.37
VLDLR-204ENST00000478776 GPN3Q9UHW5 284 aaPredicted RBP6.51□□□□□ -1.37
VLDLR-204ENST00000478776 PCOLCE2Q9UKZ9 415 aa6.51□□□□□ -1.37
VLDLR-204ENST00000478776 GSTP1P09211 210 aaKnown RBP6.5□□□□□ -1.37
VLDLR-204ENST00000478776 CD8BP10966 210 aa6.5□□□□□ -1.37
VLDLR-204ENST00000478776 HCLS1P14317 486 aaPredicted RBP6.5□□□□□ -1.37
VLDLR-204ENST00000478776 FUT4P22083 530 aa6.5□□□□□ -1.37
VLDLR-204ENST00000478776 TTLL4Q14679 1199 aa6.5□□□□□ -1.37
VLDLR-204ENST00000478776 IFI16Q16666 785 aaKnown RBP6.5□□□□□ -1.37
VLDLR-204ENST00000478776 ZNF648Q5T619 568 aaPredicted RBP6.5□□□□□ -1.37
VLDLR-204ENST00000478776 ATG4DQ86TL0 474 aaPredicted RBP6.5□□□□□ -1.37
VLDLR-204ENST00000478776 HRASLS5Q96KN8 279 aa6.5□□□□□ -1.37
VLDLR-204ENST00000478776 KRT82Q9NSB4 513 aa6.5□□□□□ -1.37
VLDLR-204ENST00000478776 NLRP2Q9NX02 1062 aa6.5□□□□□ -1.37
VLDLR-204ENST00000478776 ZNF862O60290 1169 aa6.49□□□□□ -1.37
VLDLR-204ENST00000478776 FARP2O94887 1054 aaPredicted RBP6.49□□□□□ -1.37
VLDLR-204ENST00000478776 ARHGAP4P98171 946 aa6.49□□□□□ -1.37
VLDLR-204ENST00000478776 PRKCQQ04759 706 aa6.49□□□□□ -1.37
VLDLR-204ENST00000478776 FAAP100Q0VG06 881 aa6.49□□□□□ -1.37
VLDLR-204ENST00000478776 AOC3Q16853 763 aa6.49□□□□□ -1.37
VLDLR-204ENST00000478776 KIF4BQ2VIQ3 1234 aa6.49□□□□□ -1.37
VLDLR-204ENST00000478776 FAM168AQ92567 244 aa6.49□□□□□ -1.37
VLDLR-204ENST00000478776 DISC1Q9NRI5 854 aa6.49□□□□□ -1.37
VLDLR-204ENST00000478776 TMEM39AQ9NV64 488 aa6.49□□□□□ -1.37
VLDLR-204ENST00000478776 TMEM265A0A087WTH1 108 aa6.48□□□□□ -1.37
VLDLR-204ENST00000478776 FCGRTP55899 365 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms