RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 TRAF5O00463 557 aa13.78□□□□□ -0.2
SRRT-211ENST00000478693 CACNB3P54284 484 aa13.78□□□□□ -0.2
SRRT-211ENST00000478693 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
SRRT-211ENST00000478693 SLC9C2Q5TAH2 1124 aa13.78□□□□□ -0.2
SRRT-211ENST00000478693 ZSCAN25Q6NSZ9 544 aa13.78□□□□□ -0.2
SRRT-211ENST00000478693 APOBEC3HQ6NTF7 200 aaKnown RBP13.78□□□□□ -0.2
SRRT-211ENST00000478693 FSD1Q9BTV5 496 aa13.78□□□□□ -0.2
SRRT-211ENST00000478693 PPP4R2Q9NY27 417 aa13.78□□□□□ -0.2
SRRT-211ENST00000478693 AATFQ9NY61 560 aaKnown RBP eCLIP13.78□□□□□ -0.2
SRRT-211ENST00000478693 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
SRRT-211ENST00000478693 PDE6AP16499 860 aa13.77□□□□□ -0.21
SRRT-211ENST00000478693 NF2P35240 595 aa13.77□□□□□ -0.21
SRRT-211ENST00000478693 CDC42EP5Q6NZY7 148 aa13.77□□□□□ -0.21
SRRT-211ENST00000478693 PLEKHM2Q8IWE5 1019 aa13.77□□□□□ -0.21
SRRT-211ENST00000478693 MIGA1Q8NAN2 632 aa13.77□□□□□ -0.21
SRRT-211ENST00000478693 ZNF532Q9HCE3 1301 aa13.77□□□□□ -0.21
SRRT-211ENST00000478693 STAP2Q9UGK3 403 aa13.77□□□□□ -0.21
SRRT-211ENST00000478693 CELF2O95319 508 aaKnown RBP13.76□□□□□ -0.21
SRRT-211ENST00000478693 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
SRRT-211ENST00000478693 PLCG2P16885 1265 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 FMR1Q06787 632 aaKnown RBP eCLIP13.76□□□□□ -0.21
SRRT-211ENST00000478693 PICALMQ13492 652 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 TMED8Q6PL24 325 aaPredicted RBP13.76□□□□□ -0.21
SRRT-211ENST00000478693 TEX11Q8IYF3 940 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 KBTBD3Q8NAB2 608 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 ZNF384Q8TF68 577 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 RILPL2Q969X0 211 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 CDCA5Q96FF9 252 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
SRRT-211ENST00000478693 DEFB129Q9H1M3 183 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 PPP2R3BQ9Y5P8 575 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 ECM29Q5VYK3 1845 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 DOCK2Q92608 1830 aa13.76□□□□□ -0.21
SRRT-211ENST00000478693 PASKQ96RG2 1323 aa13.75□□□□□ -0.21
SRRT-211ENST00000478693 GPR75-ASB3A0A0A6YYF3 556 aa13.75□□□□□ -0.21
SRRT-211ENST00000478693 PDE4AP27815 886 aa13.75□□□□□ -0.21
SRRT-211ENST00000478693 APLP1P51693 650 aa13.75□□□□□ -0.21
SRRT-211ENST00000478693 TCP10Q12799 353 aa13.75□□□□□ -0.21
SRRT-211ENST00000478693 TTLL12Q14166 644 aaPredicted RBP13.75□□□□□ -0.21
SRRT-211ENST00000478693 RASA3Q14644 834 aa13.75□□□□□ -0.21
SRRT-211ENST00000478693 PRAMEF18Q5VWM3 479 aa13.75□□□□□ -0.21
SRRT-211ENST00000478693 DLK2Q6UY11 383 aa13.75□□□□□ -0.21
SRRT-211ENST00000478693 ADGRA1Q86SQ6 560 aa13.75□□□□□ -0.21
SRRT-211ENST00000478693 CERS3Q8IU89 383 aa13.75□□□□□ -0.21
SRRT-211ENST00000478693 MAGEB6P1A0A0J9YX57 407 aa13.74□□□□□ -0.21
SRRT-211ENST00000478693 ADD2P35612 726 aa13.74□□□□□ -0.21
SRRT-211ENST00000478693 USP5P45974 858 aa13.74□□□□□ -0.21
SRRT-211ENST00000478693 DYNLL1P63167 89 aaKnown RBP13.74□□□□□ -0.21
SRRT-211ENST00000478693 ZSCAN29Q8IWY8 852 aaPredicted RBP13.74□□□□□ -0.21
SRRT-211ENST00000478693 SH3RF3Q8TEJ3 882 aaPredicted RBP13.74□□□□□ -0.21
SRRT-211ENST00000478693 EVI5LQ96CN4 794 aa13.74□□□□□ -0.21
SRRT-211ENST00000478693 ABT1Q9ULW3 272 aaKnown RBP13.74□□□□□ -0.21
SRRT-211ENST00000478693 MYH2Q9UKX2 1941 aa13.74□□□□□ -0.21
SRRT-211ENST00000478693 TMEM88BA6NKF7 163 aa13.73□□□□□ -0.21
SRRT-211ENST00000478693 ZFYP08048 801 aaPredicted RBP13.73□□□□□ -0.21
SRRT-211ENST00000478693 HSPA6P17066 643 aa13.73□□□□□ -0.21
SRRT-211ENST00000478693 RGS3P49796 1198 aa13.73□□□□□ -0.21
SRRT-211ENST00000478693 NFIAQ12857 509 aa13.73□□□□□ -0.21
SRRT-211ENST00000478693 TMEM39BQ9GZU3 492 aa13.73□□□□□ -0.21
SRRT-211ENST00000478693 OSBPL3Q9H4L5 887 aa13.73□□□□□ -0.21
SRRT-211ENST00000478693 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
SRRT-211ENST00000478693 MBD4O95243 580 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 RHBDL3P58872 404 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 PRKG1Q13976 671 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 UBE3CQ15386 1083 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 SLFNL1Q499Z3 407 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 FKBP1CQ5VVH2 108 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 PAXIP1Q6ZW49 1069 aaPredicted RBP13.72□□□□□ -0.21
SRRT-211ENST00000478693 FAM83AQ86UY5 434 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 C2orf69Q8N8R5 385 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 AIDAQ96BJ3 306 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 IDI2Q9BXS1 227 aa13.72□□□□□ -0.21
SRRT-211ENST00000478693 GBA2Q9HCG7 927 aaPredicted RBP13.72□□□□□ -0.21
SRRT-211ENST00000478693 CNTNAP1P78357 1384 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 TCRBV5S4A2TA0A5A2 114 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 WDHD1O75717 1129 aaPredicted RBP13.71□□□□□ -0.21
SRRT-211ENST00000478693 CHGBP05060 677 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 TTC22Q5TAA0 569 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 MAPKAPK5Q8IW41 473 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 FAM151AQ8WW52 585 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 APPBP2Q92624 585 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 HOOK2Q96ED9 719 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 CRNKL1Q9BZJ0 848 aaKnown RBP13.71□□□□□ -0.21
SRRT-211ENST00000478693 ARMT1Q9H993 441 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 DDX4Q9NQI0 724 aaKnown RBP13.71□□□□□ -0.21
SRRT-211ENST00000478693 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 FAM198AQ9UFP1 575 aa13.71□□□□□ -0.21
SRRT-211ENST00000478693 RFX7Q2KHR2 1363 aa13.71□□□□□ -0.22
SRRT-211ENST00000478693 RPAP1Q9BWH6 1393 aaPredicted RBP13.71□□□□□ -0.22
SRRT-211ENST00000478693 FLT1P17948 1338 aa13.7□□□□□ -0.22
SRRT-211ENST00000478693 MYO5AQ9Y4I1 1855 aaKnown RBP13.7□□□□□ -0.22
SRRT-211ENST00000478693 PPP1R12BO60237 982 aaPredicted RBP13.7□□□□□ -0.22
SRRT-211ENST00000478693 ENTPD3O75355 529 aa13.7□□□□□ -0.22
SRRT-211ENST00000478693 PPP4CP60510 307 aa13.7□□□□□ -0.22
SRRT-211ENST00000478693 NBPF12Q5TAG4 269 aaPredicted RBP13.7□□□□□ -0.22
SRRT-211ENST00000478693 ARMC9Q7Z3E5 817 aa13.7□□□□□ -0.22
SRRT-211ENST00000478693 LCORLQ8N3X6 602 aa13.7□□□□□ -0.22
SRRT-211ENST00000478693 DDRGK1Q96HY6 314 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms