RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 CSADQ9Y600 493 aa27.25■■□□□ 1.95
MCF2L2-210ENST00000478652 SNCAIPQ9Y6H5 919 aa27.25■■□□□ 1.95
MCF2L2-210ENST00000478652 CLUAP1Q96AJ1 413 aa27.24■■□□□ 1.95
MCF2L2-210ENST00000478652 WRNIP1Q96S55 665 aa27.24■■□□□ 1.95
MCF2L2-210ENST00000478652 DENND2AQ9ULE3 1009 aa27.24■■□□□ 1.95
MCF2L2-210ENST00000478652 SPDYE5A6NIY4 337 aa27.23■■□□□ 1.95
MCF2L2-210ENST00000478652 LDHBP07195 334 aaKnown RBP27.23■■□□□ 1.95
MCF2L2-210ENST00000478652 TIMM10P62072 90 aa27.23■■□□□ 1.95
MCF2L2-210ENST00000478652 CAP1Q01518 475 aa27.23■■□□□ 1.95
MCF2L2-210ENST00000478652 TFCP2Q12800 502 aa27.23■■□□□ 1.95
MCF2L2-210ENST00000478652 NFIAQ12857 509 aa27.23■■□□□ 1.95
MCF2L2-210ENST00000478652 ATF7IPQ6VMQ6 1270 aa27.23■■□□□ 1.95
MCF2L2-210ENST00000478652 ZKSCAN4Q969J2 545 aaPredicted RBP27.23■■□□□ 1.95
MCF2L2-210ENST00000478652 CCL15-CCL14A0A0B4J2E2 113 aa27.22■■□□□ 1.95
MCF2L2-210ENST00000478652 SEMA3EO15041 775 aa27.22■■□□□ 1.95
MCF2L2-210ENST00000478652 TCP10Q12799 353 aa27.22■■□□□ 1.95
MCF2L2-210ENST00000478652 RASGRF1Q13972 1273 aa27.22■■□□□ 1.95
MCF2L2-210ENST00000478652 CCL15Q16663 113 aa27.22■■□□□ 1.95
MCF2L2-210ENST00000478652 MYO5AQ9Y4I1 1855 aaKnown RBP27.21■■□□□ 1.95
MCF2L2-210ENST00000478652 A0A1B0GUL7 405 aa27.21■■□□□ 1.95
MCF2L2-210ENST00000478652 OTUD7BQ6GQQ9 843 aa27.21■■□□□ 1.95
MCF2L2-210ENST00000478652 MIGA2Q7L4E1 593 aa27.21■■□□□ 1.95
MCF2L2-210ENST00000478652 OTOP1Q7RTM1 612 aa27.21■■□□□ 1.95
MCF2L2-210ENST00000478652 MIER1Q8N108 512 aa27.21■■□□□ 1.95
MCF2L2-210ENST00000478652 CD99L2Q8TCZ2 262 aa27.21■■□□□ 1.95
MCF2L2-210ENST00000478652 TRIM17Q9Y577 477 aa27.21■■□□□ 1.95
MCF2L2-210ENST00000478652 HTTP42858 3142 aa27.2■■□□□ 1.95
MCF2L2-210ENST00000478652 IPO8O15397 1037 aaKnown RBP27.2■■□□□ 1.94
MCF2L2-210ENST00000478652 FAM43AQ8N2R8 423 aa27.2■■□□□ 1.94
MCF2L2-210ENST00000478652 FAM151AQ8WW52 585 aa27.2■■□□□ 1.94
MCF2L2-210ENST00000478652 FAM198AQ9UFP1 575 aa27.2■■□□□ 1.94
MCF2L2-210ENST00000478652 RBBP6Q7Z6E9 1792 aaKnown RBP27.2■■□□□ 1.94
MCF2L2-210ENST00000478652 PNMA6EA0A0J9YXQ4 647 aa27.19■■□□□ 1.94
MCF2L2-210ENST00000478652 ZBTB22O15209 634 aa27.19■■□□□ 1.94
MCF2L2-210ENST00000478652 INPP5BP32019 993 aa27.19■■□□□ 1.94
MCF2L2-210ENST00000478652 GTF2A2P52657 109 aa27.19■■□□□ 1.94
MCF2L2-210ENST00000478652 XAGE2Q96GT9 111 aa27.19■■□□□ 1.94
MCF2L2-210ENST00000478652 PTPRFP10586 1907 aa27.19■■□□□ 1.94
MCF2L2-210ENST00000478652 DCAF15Q66K64 600 aa27.18■■□□□ 1.94
MCF2L2-210ENST00000478652 ERO1BQ86YB8 467 aa27.18■■□□□ 1.94
MCF2L2-210ENST00000478652 ZFPM1Q8IX07 1006 aa27.18■■□□□ 1.94
MCF2L2-210ENST00000478652 TMEM57Q8N5G2 664 aa27.18■■□□□ 1.94
MCF2L2-210ENST00000478652 USP40Q9NVE5 1235 aa27.18■■□□□ 1.94
MCF2L2-210ENST00000478652 IRF6O14896 467 aa27.17■■□□□ 1.94
MCF2L2-210ENST00000478652 GNAI2P04899 355 aa27.17■■□□□ 1.94
MCF2L2-210ENST00000478652 HNRNPUQ00839 825 aaKnown RBP eCLIP27.17■■□□□ 1.94
MCF2L2-210ENST00000478652 TAF1CQ15572 869 aaPredicted RBP27.17■■□□□ 1.94
MCF2L2-210ENST00000478652 HOOK2Q96ED9 719 aa27.17■■□□□ 1.94
MCF2L2-210ENST00000478652 ZNF341Q9BYN7 854 aa27.17■■□□□ 1.94
MCF2L2-210ENST00000478652 RFX7Q2KHR2 1363 aa27.17■■□□□ 1.94
MCF2L2-210ENST00000478652 DOCK1Q14185 1865 aa27.17■■□□□ 1.94
MCF2L2-210ENST00000478652 GAKO14976 1311 aa27.16■■□□□ 1.94
MCF2L2-210ENST00000478652 PHIPQ8WWQ0 1821 aa27.16■■□□□ 1.94
MCF2L2-210ENST00000478652 ERO1AQ96HE7 468 aa27.16■■□□□ 1.94
MCF2L2-210ENST00000478652 CDK5RAP2Q96SN8 1893 aa27.16■■□□□ 1.94
MCF2L2-210ENST00000478652 PDS5AQ29RF7 1337 aaKnown RBP27.16■■□□□ 1.94
MCF2L2-210ENST00000478652 KIAA0100Q14667 2235 aaKnown RBP27.15■■□□□ 1.94
MCF2L2-210ENST00000478652 SP3Q02447 781 aa27.15■■□□□ 1.94
MCF2L2-210ENST00000478652 ABCF2Q9UG63 623 aa27.15■■□□□ 1.94
MCF2L2-210ENST00000478652 AKAP2Q9Y2D5 859 aa27.15■■□□□ 1.94
MCF2L2-210ENST00000478652 ATRNL1Q5VV63 1379 aa27.14■■□□□ 1.94
MCF2L2-210ENST00000478652 PPIL2Q13356 520 aa27.14■■□□□ 1.94
MCF2L2-210ENST00000478652 PI16Q6UXB8 463 aa27.14■■□□□ 1.94
MCF2L2-210ENST00000478652 ZGPATQ8N5A5 531 aaKnown RBP27.14■■□□□ 1.94
MCF2L2-210ENST00000478652 MAST2Q6P0Q8 1798 aa27.14■■□□□ 1.93
MCF2L2-210ENST00000478652 MVPQ14764 893 aaKnown RBP27.13■■□□□ 1.93
MCF2L2-210ENST00000478652 ZKSCAN2Q63HK3 967 aa27.13■■□□□ 1.93
MCF2L2-210ENST00000478652 DZIP1Q86YF9 867 aaKnown RBP27.13■■□□□ 1.93
MCF2L2-210ENST00000478652 ZNF384Q8TF68 577 aa27.13■■□□□ 1.93
MCF2L2-210ENST00000478652 NEUROD6Q96NK8 337 aa27.13■■□□□ 1.93
MCF2L2-210ENST00000478652 ZNF112Q9UJU3 913 aa27.13■■□□□ 1.93
MCF2L2-210ENST00000478652 ATAD5Q96QE3 1844 aa27.13■■□□□ 1.93
MCF2L2-210ENST00000478652 BTBD19C9JJ37 291 aa27.12■■□□□ 1.93
MCF2L2-210ENST00000478652 RGS3P49796 1198 aa27.12■■□□□ 1.93
MCF2L2-210ENST00000478652 ZFYVE28Q9HCC9 887 aa27.12■■□□□ 1.93
MCF2L2-210ENST00000478652 PTPN22Q9Y2R2 807 aa27.12■■□□□ 1.93
MCF2L2-210ENST00000478652 CETPP11597 493 aa27.11■■□□□ 1.93
MCF2L2-210ENST00000478652 SNAPC2Q13487 334 aa27.11■■□□□ 1.93
MCF2L2-210ENST00000478652 EFCC1Q9HA90 598 aa27.11■■□□□ 1.93
MCF2L2-210ENST00000478652 HMG20BQ9P0W2 317 aa27.11■■□□□ 1.93
MCF2L2-210ENST00000478652 SLURP2P0DP57 97 aa27.1■■□□□ 1.93
MCF2L2-210ENST00000478652 SH3BP5LQ7L8J4 393 aa27.1■■□□□ 1.93
MCF2L2-210ENST00000478652 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.1■■□□□ 1.93
MCF2L2-210ENST00000478652 IDI2Q9BXS1 227 aa27.1■■□□□ 1.93
MCF2L2-210ENST00000478652 DDX4Q9NQI0 724 aaKnown RBP27.1■■□□□ 1.93
MCF2L2-210ENST00000478652 MGAMO43451 1857 aa27.1■■□□□ 1.93
MCF2L2-210ENST00000478652 MROH7-TTC4A0A0A0MT08 1334 aa27.1■■□□□ 1.93
MCF2L2-210ENST00000478652 WDHD1O75717 1129 aaPredicted RBP27.09■■□□□ 1.93
MCF2L2-210ENST00000478652 BTDP43251 543 aa27.09■■□□□ 1.93
MCF2L2-210ENST00000478652 MECOMQ03112 1051 aa27.09■■□□□ 1.93
MCF2L2-210ENST00000478652 PPATQ06203 517 aa27.09■■□□□ 1.93
MCF2L2-210ENST00000478652 DIEXFQ68CQ4 756 aaKnown RBP27.09■■□□□ 1.93
MCF2L2-210ENST00000478652 C1orf115Q9H7X2 142 aa27.09■■□□□ 1.93
MCF2L2-210ENST00000478652 G3BP1Q13283 466 aaKnown RBP eCLIP27.08■■□□□ 1.93
MCF2L2-210ENST00000478652 POLA2Q14181 598 aa27.08■■□□□ 1.93
MCF2L2-210ENST00000478652 NOL9Q5SY16 702 aaKnown RBP27.08■■□□□ 1.93
MCF2L2-210ENST00000478652 TBC1D9Q6ZT07 1266 aa27.08■■□□□ 1.93
MCF2L2-210ENST00000478652 FAM163AQ96GL9 167 aaPredicted RBP27.08■■□□□ 1.93
MCF2L2-210ENST00000478652 SIPA1L1O43166 1804 aa27.08■■□□□ 1.93
MCF2L2-210ENST00000478652 FOCADQ5VW36 1801 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms