RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	SALL1	Q9NSC2	1324 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	IRS2	Q9Y4H2	1338 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	MAST2	Q6P0Q8	1798 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	MYH15	Q9Y2K3	1946 aa		11.31	□□□□□ -0.6
ATG7-223	ENST00000478638	ANKRD31	Q8N7Z5	1873 aa		11.3	□□□□□ -0.6
ATG7-223	ENST00000478638	GOLGA6L3	A6NEY3	463 aa		11.3	□□□□□ -0.6
ATG7-223	ENST00000478638	RIMBP2	O15034	1052 aa		11.3	□□□□□ -0.6
ATG7-223	ENST00000478638	MRE11	P49959	708 aa		11.3	□□□□□ -0.6
ATG7-223	ENST00000478638	AOC3	Q16853	763 aa		11.3	□□□□□ -0.6
ATG7-223	ENST00000478638		Q6ZUG5	572 aa		11.3	□□□□□ -0.6
ATG7-223	ENST00000478638	CHMP4C	Q96CF2	233 aa		11.3	□□□□□ -0.6
ATG7-223	ENST00000478638	STRBP	Q96SI9	672 aa	Known RBP	11.3	□□□□□ -0.6
ATG7-223	ENST00000478638	LARP6	Q9BRS8	491 aa	Known RBP	11.3	□□□□□ -0.6
ATG7-223	ENST00000478638	NBPF3	Q9H094	633 aa		11.3	□□□□□ -0.6
ATG7-223	ENST00000478638	MYH13	Q9UKX3	1938 aa		11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	SEMA3E	O15041	775 aa		11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	PRPF40A	O75400	957 aa	Known RBP	11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	XRCC6	P12956	609 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	IMMT	Q16891	758 aa	Known RBP	11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	SLC9C2	Q5TAH2	1124 aa		11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	GAS2L3	Q86XJ1	694 aa		11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	NIM1K	Q8IY84	436 aa		11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	NECAB1	Q8N987	351 aa		11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	COL1A1	P02452	1464 aa	Predicted RBP	11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	ZNF532	Q9HCE3	1301 aa		11.29	□□□□□ -0.6
ATG7-223	ENST00000478638	ANTXR2	P58335	489 aa		11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	KIAA2012	Q0VF49	1180 aa		11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	MAP3K12	Q12852	859 aa		11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	TTLL5	Q6EMB2	1281 aa		11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	FBXO33	Q7Z6M2	555 aa		11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	NSUN7	Q8NE18	718 aa	Known RBP	11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	TCEANC2	Q96MN5	208 aa		11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	GPR101	Q96P66	508 aa	Predicted RBP	11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	MTA3	Q9BTC8	594 aa		11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	LRRC37A	A6NMS7	1700 aa		11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	ELP1	O95163	1332 aa		11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	NID2	Q14112	1375 aa		11.28	□□□□□ -0.6
ATG7-223	ENST00000478638	CTDNEP1	O95476	244 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	YY1	P25490	414 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	PRELP	P51888	382 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	EIF6	P56537	245 aa	Known RBP	11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	HMGN5	P82970	282 aa	Known RBP	11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	SCRN1	Q12765	414 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	DOK7	Q18PE1	504 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	DPY19L2	Q6NUT2	758 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	C15orf52	Q6ZUT6	534 aa	Known RBP	11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	BRF1	Q92994	677 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	CHAMP1	Q96JM3	812 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	GRPEL1	Q9HAV7	217 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	SLX4	Q8IY92	1834 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	DUOX1	Q9NRD9	1551 aa		11.27	□□□□□ -0.61
ATG7-223	ENST00000478638	COL11A2	P13942	1736 aa	Predicted RBP	11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	WTIP	A6NIX2	430 aa	Predicted RBP	11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	PATL2	C9JE40	543 aa	Known RBP	11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	SNAP23	O00161	211 aa		11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	GNAT2	P19087	354 aa		11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	PDIA3	P30101	505 aa	Known RBP	11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	BCAM	P50895	628 aa		11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	ZSCAN23	Q3MJ62	389 aa		11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	LARP1B	Q659C4	914 aa	Known RBP	11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	NAA16	Q6N069	864 aa	Predicted RBP	11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	USP48	Q86UV5	1035 aa		11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	VPS37D	Q86XT2	251 aa		11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	NCOA7	Q8NI08	942 aa		11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	GZF1	Q9H116	711 aa	Predicted RBP	11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	TMEM63C	Q9P1W3	806 aa		11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	LTBP1	Q14766	1721 aa		11.26	□□□□□ -0.61
ATG7-223	ENST00000478638	UTRN	P46939	3433 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	GSG1L2	A8MUP6	293 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	ZNF213	O14771	459 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	IDH1	O75874	414 aa	Known RBP	11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	MCM5	P33992	734 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	UBE2H	P62256	183 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	REST	Q13127	1097 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	CSPP1	Q1MSJ5	1256 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	CAVIN4	Q5BKX8	364 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	CDC37L1	Q7L3B6	337 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	ZNF804A	Q7Z570	1209 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	FAM84B	Q96KN1	310 aa	Predicted RBP	11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	COA1	Q9GZY4	146 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	DBNDD1	Q9H9R9	158 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	GNL3L	Q9NVN8	582 aa	Known RBP	11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	DENND2A	Q9ULE3	1009 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	ZNRF3	Q9ULT6	936 aa		11.25	□□□□□ -0.61
ATG7-223	ENST00000478638	DLEC1	Q9Y238	1755 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	CCDC88A	Q3V6T2	1871 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	FZD9	O00144	591 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	ECE2	O60344	883 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	JAK2	O60674	1132 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	HIBADH	P31937	336 aa	Known RBP	11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	TNIP1	Q15025	636 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	CAVIN1	Q6NZI2	390 aa	Known RBP	11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	PODN	Q7Z5L7	613 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	SGMS1	Q86VZ5	419 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	TBC1D10C	Q8IV04	446 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	IFNL3	Q8IZI9	196 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	MAGEB6	Q8N7X4	407 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	TMEM87B	Q96K49	555 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms