RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 LBHD1Q9BQE6 289 aaPredicted RBP13.35□□□□□ -0.27
TRAIP-206ENST00000477546 TTYH1Q9H313 450 aaPredicted RBP13.35□□□□□ -0.27
TRAIP-206ENST00000477546 CWC25Q9NXE8 425 aaPredicted RBP13.35□□□□□ -0.27
TRAIP-206ENST00000477546 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
TRAIP-206ENST00000477546 DDX60LQ5H9U9 1706 aaKnown RBP13.35□□□□□ -0.27
TRAIP-206ENST00000477546 PIEZO1Q92508 2521 aa13.35□□□□□ -0.27
TRAIP-206ENST00000477546 HMGCRP04035 888 aa13.34□□□□□ -0.27
TRAIP-206ENST00000477546 IL1R1P14778 569 aa13.34□□□□□ -0.27
TRAIP-206ENST00000477546 IGHMBP2P38935 993 aaKnown RBP13.34□□□□□ -0.27
TRAIP-206ENST00000477546 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
TRAIP-206ENST00000477546 C15orf52Q6ZUT6 534 aaKnown RBP13.34□□□□□ -0.27
TRAIP-206ENST00000477546 DZIP1LQ8IYY4 767 aaKnown RBP13.34□□□□□ -0.27
TRAIP-206ENST00000477546 HOOK2Q96ED9 719 aa13.34□□□□□ -0.27
TRAIP-206ENST00000477546 C1QTNF1Q9BXJ1 281 aa13.34□□□□□ -0.27
TRAIP-206ENST00000477546 HMX1Q9NP08 348 aaPredicted RBP13.34□□□□□ -0.27
TRAIP-206ENST00000477546 MGAMO43451 1857 aa13.33□□□□□ -0.27
TRAIP-206ENST00000477546 HOXB7P09629 217 aa13.33□□□□□ -0.28
TRAIP-206ENST00000477546 COL6A1P12109 1028 aa13.33□□□□□ -0.28
TRAIP-206ENST00000477546 GOLGA2Q08379 1002 aa13.33□□□□□ -0.28
TRAIP-206ENST00000477546 CCDC184Q52MB2 194 aa13.33□□□□□ -0.28
TRAIP-206ENST00000477546 USP38Q8NB14 1042 aa13.33□□□□□ -0.28
TRAIP-206ENST00000477546 COA7Q96BR5 231 aa13.33□□□□□ -0.28
TRAIP-206ENST00000477546 MYD88Q99836 296 aa13.33□□□□□ -0.28
TRAIP-206ENST00000477546 MRS2Q9HD23 443 aa13.33□□□□□ -0.28
TRAIP-206ENST00000477546 HCN4Q9Y3Q4 1203 aa13.33□□□□□ -0.28
TRAIP-206ENST00000477546 CDH23Q9H251 3354 aa13.33□□□□□ -0.28
TRAIP-206ENST00000477546 SMAD3P84022 425 aaKnown RBP13.32□□□□□ -0.28
TRAIP-206ENST00000477546 LRRC26Q2I0M4 334 aa13.32□□□□□ -0.28
TRAIP-206ENST00000477546 DCAF15Q66K64 600 aa13.32□□□□□ -0.28
TRAIP-206ENST00000477546 GPAT2Q6NUI2 795 aa13.32□□□□□ -0.28
TRAIP-206ENST00000477546 ZNF804AQ7Z570 1209 aa13.32□□□□□ -0.28
TRAIP-206ENST00000477546 ADAMTS19Q8TE59 1207 aa13.32□□□□□ -0.28
TRAIP-206ENST00000477546 ATXN2LQ8WWM7 1075 aaKnown RBP13.32□□□□□ -0.28
TRAIP-206ENST00000477546 TTF2Q9UNY4 1162 aaKnown RBP13.31□□□□□ -0.28
TRAIP-206ENST00000477546 JAG2Q9Y219 1238 aa13.31□□□□□ -0.28
TRAIP-206ENST00000477546 SPEF2Q9C093 1822 aa13.31□□□□□ -0.28
TRAIP-206ENST00000477546 INPP5BP32019 993 aa13.3□□□□□ -0.28
TRAIP-206ENST00000477546 CHRNDQ07001 517 aa13.3□□□□□ -0.28
TRAIP-206ENST00000477546 ASB2Q96Q27 587 aa13.3□□□□□ -0.28
TRAIP-206ENST00000477546 UHRF1Q96T88 793 aaPredicted RBP13.3□□□□□ -0.28
TRAIP-206ENST00000477546 MPHOSPH8Q99549 860 aa13.3□□□□□ -0.28
TRAIP-206ENST00000477546 ZNF341Q9BYN7 854 aa13.3□□□□□ -0.28
TRAIP-206ENST00000477546 NCOR1O75376 2440 aa13.29□□□□□ -0.28
TRAIP-206ENST00000477546 CXCL11O14625 94 aa13.29□□□□□ -0.28
TRAIP-206ENST00000477546 APAF1O14727 1248 aa13.29□□□□□ -0.28
TRAIP-206ENST00000477546 CRKP46108 304 aa13.29□□□□□ -0.28
TRAIP-206ENST00000477546 MFSD14BQ5SR56 506 aa13.29□□□□□ -0.28
TRAIP-206ENST00000477546 FAM83AQ86UY5 434 aa13.29□□□□□ -0.28
TRAIP-206ENST00000477546 TRIM35Q9UPQ4 493 aa13.29□□□□□ -0.28
TRAIP-206ENST00000477546 SLC45A1Q9Y2W3 748 aa13.29□□□□□ -0.28
TRAIP-206ENST00000477546 RPAP1Q9BWH6 1393 aaPredicted RBP13.29□□□□□ -0.28
TRAIP-206ENST00000477546 SNAP23O00161 211 aa13.28□□□□□ -0.28
TRAIP-206ENST00000477546 SHHQ15465 462 aa13.28□□□□□ -0.28
TRAIP-206ENST00000477546 FASTKD5Q7L8L6 764 aaKnown RBP13.28□□□□□ -0.28
TRAIP-206ENST00000477546 SMCR8Q8TEV9 937 aaPredicted RBP13.28□□□□□ -0.28
TRAIP-206ENST00000477546 METTL22Q9BUU2 404 aaPredicted RBP13.28□□□□□ -0.28
TRAIP-206ENST00000477546 LAS1LQ9Y4W2 734 aaKnown RBP13.28□□□□□ -0.28
TRAIP-206ENST00000477546 CHL1O00533 1208 aa13.27□□□□□ -0.29
TRAIP-206ENST00000477546 ITGA6P23229 1130 aa13.27□□□□□ -0.29
TRAIP-206ENST00000477546 CACNB3P54284 484 aa13.27□□□□□ -0.29
TRAIP-206ENST00000477546 TRIM32Q13049 653 aa13.27□□□□□ -0.29
TRAIP-206ENST00000477546 THEGQ9P2T0 379 aa13.27□□□□□ -0.29
TRAIP-206ENST00000477546 NOL9Q5SY16 702 aaKnown RBP13.26□□□□□ -0.29
TRAIP-206ENST00000477546 C9orf50Q5SZB4 431 aa13.26□□□□□ -0.29
TRAIP-206ENST00000477546 MAP3K21Q5TCX8 1036 aa13.26□□□□□ -0.29
TRAIP-206ENST00000477546 FKBP1CQ5VVH2 108 aa13.26□□□□□ -0.29
TRAIP-206ENST00000477546 MIGA2Q7L4E1 593 aa13.26□□□□□ -0.29
TRAIP-206ENST00000477546 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
TRAIP-206ENST00000477546 PRKAG2Q9UGJ0 569 aa13.26□□□□□ -0.29
TRAIP-206ENST00000477546 ZNF112Q9UJU3 913 aa13.26□□□□□ -0.29
TRAIP-206ENST00000477546 A0A0G2JLL6 359 aaPredicted RBP13.25□□□□□ -0.29
TRAIP-206ENST00000477546 TAF5LO75529 589 aa13.25□□□□□ -0.29
TRAIP-206ENST00000477546 MRPS5P82675 430 aaKnown RBP13.25□□□□□ -0.29
TRAIP-206ENST00000477546 FAM110CQ1W6H9 321 aa13.25□□□□□ -0.29
TRAIP-206ENST00000477546 PRRT2Q7Z6L0 340 aaPredicted RBP13.25□□□□□ -0.29
TRAIP-206ENST00000477546 ALYREFQ86V81 257 aaKnown RBP13.25□□□□□ -0.29
TRAIP-206ENST00000477546 ANKRD13CQ8N6S4 541 aa13.25□□□□□ -0.29
TRAIP-206ENST00000477546 PHAXQ9H814 394 aaKnown RBP13.25□□□□□ -0.29
TRAIP-206ENST00000477546 PRKAR2AP13861 404 aaKnown RBP13.24□□□□□ -0.29
TRAIP-206ENST00000477546 HDLBPQ00341 1268 aaKnown RBP13.24□□□□□ -0.29
TRAIP-206ENST00000477546 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
TRAIP-206ENST00000477546 GRIN2CQ14957 1233 aa13.24□□□□□ -0.29
TRAIP-206ENST00000477546 IL27Q8NEV9 243 aa13.24□□□□□ -0.29
TRAIP-206ENST00000477546 TRIB2Q92519 343 aa13.24□□□□□ -0.29
TRAIP-206ENST00000477546 LRFN3Q9BTN0 628 aa13.24□□□□□ -0.29
TRAIP-206ENST00000477546 GJD2Q9UKL4 321 aa13.24□□□□□ -0.29
TRAIP-206ENST00000477546 MYH3P11055 1940 aa13.23□□□□□ -0.29
TRAIP-206ENST00000477546 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
TRAIP-206ENST00000477546 TDRD7Q8NHU6 1098 aaKnown RBP13.23□□□□□ -0.29
TRAIP-206ENST00000477546 BDP1A6H8Y1 2624 aa13.22□□□□□ -0.29
TRAIP-206ENST00000477546 DDX58O95786 925 aaKnown RBP13.22□□□□□ -0.29
TRAIP-206ENST00000477546 IGKV5-2P06315 115 aa13.22□□□□□ -0.29
TRAIP-206ENST00000477546 GADL1Q6ZQY3 521 aa13.22□□□□□ -0.29
TRAIP-206ENST00000477546 TEKT1Q969V4 418 aa13.22□□□□□ -0.29
TRAIP-206ENST00000477546 PLA2G12BQ9BX93 195 aa13.22□□□□□ -0.29
TRAIP-206ENST00000477546 MAST2Q6P0Q8 1798 aa13.22□□□□□ -0.29
TRAIP-206ENST00000477546 DOCK3Q8IZD9 2030 aa13.22□□□□□ -0.29
TRAIP-206ENST00000477546 AKNAD1Q5T1N1 836 aa13.21□□□□□ -0.29
TRAIP-206ENST00000477546 LHX8Q68G74 356 aa13.21□□□□□ -0.29
TRAIP-206ENST00000477546 UBE3BQ7Z3V4 1068 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms