RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 NBPF5PQ86XG9 351 aaPredicted RBP7.94□□□□□ -1.14
LDB3-206ENST00000477489 ARHGEF1Q92888 912 aaKnown RBP7.94□□□□□ -1.14
LDB3-206ENST00000477489 ZFRQ96KR1 1074 aaKnown RBP7.94□□□□□ -1.14
LDB3-206ENST00000477489 PDGFDQ9GZP0 370 aaPredicted RBP7.94□□□□□ -1.14
LDB3-206ENST00000477489 PDRG1Q9NUG6 133 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 TSKSQ9UJT2 592 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 ZNF804BA4D1E1 1349 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 WDR19Q8NEZ3 1342 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 LAMA4Q16363 1823 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 KIAA1551Q9HCM1 1747 aa7.93□□□□□ -1.14
LDB3-206ENST00000477489 GNAT2P19087 354 aa7.93□□□□□ -1.14
LDB3-206ENST00000477489 CASTP20810 708 aaKnown RBP7.93□□□□□ -1.14
LDB3-206ENST00000477489 ADD2P35612 726 aa7.93□□□□□ -1.14
LDB3-206ENST00000477489 BCAMP50895 628 aa7.93□□□□□ -1.14
LDB3-206ENST00000477489 FKBP4Q02790 459 aaKnown RBP eCLIP7.93□□□□□ -1.14
LDB3-206ENST00000477489 MAP3K12Q12852 859 aa7.93□□□□□ -1.14
LDB3-206ENST00000477489 ERFEQ4G0M1 354 aa7.93□□□□□ -1.14
LDB3-206ENST00000477489 TBC1D9BQ66K14 1250 aa7.93□□□□□ -1.14
LDB3-206ENST00000477489 SYNE4Q8N205 404 aa7.93□□□□□ -1.14
LDB3-206ENST00000477489 RGS22Q8NE09 1264 aa7.93□□□□□ -1.14
LDB3-206ENST00000477489 JAKMIP1Q96N16 626 aaKnown RBP7.93□□□□□ -1.14
LDB3-206ENST00000477489 MAST3O60307 1309 aa7.93□□□□□ -1.14
LDB3-206ENST00000477489 QSER1Q2KHR3 1735 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 MYH13Q9UKX3 1938 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 SOWAHBA6NEL2 793 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 FRAT2O75474 233 aaPredicted RBP7.92□□□□□ -1.14
LDB3-206ENST00000477489 HSPD1P10809 573 aaKnown RBP7.92□□□□□ -1.14
LDB3-206ENST00000477489 HSPA6P17066 643 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 RPS6KB1P23443 525 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 ADORA1P30542 326 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 MCAMP43121 646 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 ZAP70P43403 619 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 AK2P54819 239 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 RPS8P62241 208 aaKnown RBP7.92□□□□□ -1.14
LDB3-206ENST00000477489 CHRNDQ07001 517 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 ALX1Q15699 326 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 CAVIN4Q5BKX8 364 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 ZNF589Q86UQ0 364 aaPredicted RBP7.92□□□□□ -1.14
LDB3-206ENST00000477489 PACS2Q86VP3 889 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 SPATA5Q8NB90 893 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 TNPO1Q92973 898 aaKnown RBP7.92□□□□□ -1.14
LDB3-206ENST00000477489 CCDC85AQ96PX6 553 aaPredicted RBP7.92□□□□□ -1.14
LDB3-206ENST00000477489 NEK1Q96PY6 1258 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 MTA3Q9BTC8 594 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 UPF3BQ9BZI7 483 aaKnown RBP7.92□□□□□ -1.14
LDB3-206ENST00000477489 ISY1Q9ULR0 285 aaKnown RBP7.92□□□□□ -1.14
LDB3-206ENST00000477489 ATP6V1DQ9Y5K8 247 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 WDR33Q9C0J8 1336 aaKnown RBP7.92□□□□□ -1.14
LDB3-206ENST00000477489 NRXN2Q9P2S2 1712 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 MAST2Q6P0Q8 1798 aa7.92□□□□□ -1.14
LDB3-206ENST00000477489 PDCP20941 246 aa7.91□□□□□ -1.14
LDB3-206ENST00000477489 PRSS12P56730 875 aa7.91□□□□□ -1.14
LDB3-206ENST00000477489 ST5P78524 1137 aa7.91□□□□□ -1.14
LDB3-206ENST00000477489 IMMTQ16891 758 aaKnown RBP7.91□□□□□ -1.14
LDB3-206ENST00000477489 C15orf52Q6ZUT6 534 aaKnown RBP7.91□□□□□ -1.14
LDB3-206ENST00000477489 DHX32Q7L7V1 743 aaKnown RBP7.91□□□□□ -1.14
LDB3-206ENST00000477489 CNBD1Q8NA66 436 aa7.91□□□□□ -1.14
LDB3-206ENST00000477489 KCNV2Q8TDN2 545 aa7.91□□□□□ -1.14
LDB3-206ENST00000477489 EDC3Q96F86 508 aaKnown RBP7.91□□□□□ -1.14
LDB3-206ENST00000477489 AGXT2Q9BYV1 514 aa7.91□□□□□ -1.14
LDB3-206ENST00000477489 DENND2AQ9ULE3 1009 aa7.91□□□□□ -1.14
LDB3-206ENST00000477489 PNPLA7Q6ZV29 1317 aa7.91□□□□□ -1.14
LDB3-206ENST00000477489 CCDC88AQ3V6T2 1871 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 LRRC37AA6NMS7 1700 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 TIAM2Q8IVF5 1701 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.9□□□□□ -1.14
LDB3-206ENST00000477489 BRD1O95696 1058 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 CYP21A2P08686 494 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 PHKA1P46020 1223 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 EVCP57679 992 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 GRAPQ13588 217 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 NFIXQ14938 502 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 WASHC4Q2M389 1173 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 CRY2Q49AN0 593 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 SLC9C2Q5TAH2 1124 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 PTF1AQ7RTS3 328 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 CERS3Q8IU89 383 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 NLGN1Q8N2Q7 840 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 ZGPATQ8N5A5 531 aaKnown RBP7.9□□□□□ -1.14
LDB3-206ENST00000477489 GRAPLQ8TC17 118 aaPredicted RBP7.9□□□□□ -1.14
LDB3-206ENST00000477489 LLPHQ9BRT6 129 aaKnown RBP7.9□□□□□ -1.14
LDB3-206ENST00000477489 CDHR5Q9HBB8 845 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 SEC31BQ9NQW1 1179 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 MINPP1Q9UNW1 487 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 LEMD3Q9Y2U8 911 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 KIF3AQ9Y496 699 aa7.9□□□□□ -1.14
LDB3-206ENST00000477489 TNRC6CQ9HCJ0 1690 aaKnown RBP7.89□□□□□ -1.15
LDB3-206ENST00000477489 SALL1Q9NSC2 1324 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 TCRBV5S4A2TA0A5A2 114 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 KLRG2A4D1S0 409 aaPredicted RBP7.89□□□□□ -1.15
LDB3-206ENST00000477489 FAM177BA6PVY3 158 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 GPAA1O43292 621 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 PCP11498 1178 aaKnown RBP7.89□□□□□ -1.15
LDB3-206ENST00000477489 GYS1P13807 737 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 PDE6AP16499 860 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 TM4SF1P30408 202 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 HOXA10P31260 410 aaPredicted RBP7.89□□□□□ -1.15
LDB3-206ENST00000477489 RASGRF1Q13972 1273 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 SCARF1Q14162 830 aa7.89□□□□□ -1.15
LDB3-206ENST00000477489 GPR162Q16538 588 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms