RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 DMRTB1Q96MA1 342 aa7.87□□□□□ -1.15
UBR3-209ENST00000477461 NLRP2Q9NX02 1062 aa7.87□□□□□ -1.15
UBR3-209ENST00000477461 TRAK1Q9UPV9 953 aa7.87□□□□□ -1.15
UBR3-209ENST00000477461 PRPF40BQ6NWY9 871 aaKnown RBP7.86□□□□□ -1.15
UBR3-209ENST00000477461 GATA6Q92908 595 aa7.86□□□□□ -1.15
UBR3-209ENST00000477461 ACSS3Q9H6R3 686 aa7.86□□□□□ -1.15
UBR3-209ENST00000477461 GPN3Q9UHW5 284 aaPredicted RBP7.86□□□□□ -1.15
UBR3-209ENST00000477461 AKAP2Q9Y2D5 859 aa7.86□□□□□ -1.15
UBR3-209ENST00000477461 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.85□□□□□ -1.15
UBR3-209ENST00000477461 PLCB3Q01970 1234 aa7.85□□□□□ -1.15
UBR3-209ENST00000477461 PTPN12Q05209 780 aaKnown RBP7.85□□□□□ -1.15
UBR3-209ENST00000477461 AP3B2Q13367 1082 aa7.85□□□□□ -1.15
UBR3-209ENST00000477461 DUSP27Q5VZP5 1158 aa7.85□□□□□ -1.15
UBR3-209ENST00000477461 ZNF765Q7L2R6 523 aa7.85□□□□□ -1.15
UBR3-209ENST00000477461 METTL22Q9BUU2 404 aaPredicted RBP7.85□□□□□ -1.15
UBR3-209ENST00000477461 BCO2Q9BYV7 579 aa7.85□□□□□ -1.15
UBR3-209ENST00000477461 PPP4R2Q9NY27 417 aa7.85□□□□□ -1.15
UBR3-209ENST00000477461 ANGEL1Q9UNK9 670 aaKnown RBP7.85□□□□□ -1.15
UBR3-209ENST00000477461 MAPK1P28482 360 aa7.84□□□□□ -1.15
UBR3-209ENST00000477461 MSMPQ1L6U9 139 aa7.84□□□□□ -1.15
UBR3-209ENST00000477461 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.84□□□□□ -1.15
UBR3-209ENST00000477461 NXPE4Q6UWF7 544 aa7.84□□□□□ -1.15
UBR3-209ENST00000477461 KCNB2Q92953 911 aa7.84□□□□□ -1.15
UBR3-209ENST00000477461 ALKBH8Q96BT7 664 aaKnown RBP7.84□□□□□ -1.15
UBR3-209ENST00000477461 CCDC39Q9UFE4 941 aa7.84□□□□□ -1.15
UBR3-209ENST00000477461 DCTN4Q9UJW0 460 aa7.84□□□□□ -1.15
UBR3-209ENST00000477461 PNMA6FA0A0J9YX94 578 aa7.83□□□□□ -1.16
UBR3-209ENST00000477461 ZNF862O60290 1169 aa7.83□□□□□ -1.16
UBR3-209ENST00000477461 RPS26P11Q5JNZ5 115 aaPredicted RBP7.83□□□□□ -1.16
UBR3-209ENST00000477461 ABI1Q8IZP0 508 aa7.83□□□□□ -1.16
UBR3-209ENST00000477461 C1GALT1Q9NS00 363 aa7.83□□□□□ -1.16
UBR3-209ENST00000477461 TMPRSS2O15393 492 aa7.82□□□□□ -1.16
UBR3-209ENST00000477461 RNGTTO60942 597 aaKnown RBP7.82□□□□□ -1.16
UBR3-209ENST00000477461 SLFN14P0C7P3 912 aa7.82□□□□□ -1.16
UBR3-209ENST00000477461 TP53INP2Q8IXH6 220 aa7.82□□□□□ -1.16
UBR3-209ENST00000477461 STK35Q8TDR2 534 aa7.82□□□□□ -1.16
UBR3-209ENST00000477461 GSX1Q9H4S2 264 aaPredicted RBP7.82□□□□□ -1.16
UBR3-209ENST00000477461 PIDD1Q9HB75 910 aa7.82□□□□□ -1.16
UBR3-209ENST00000477461 ZC3H7BQ9UGR2 993 aaKnown RBP7.82□□□□□ -1.16
UBR3-209ENST00000477461 PAX4O43316 350 aa7.81□□□□□ -1.16
UBR3-209ENST00000477461 BRD1O95696 1058 aa7.81□□□□□ -1.16
UBR3-209ENST00000477461 GSTP1P09211 210 aaKnown RBP7.81□□□□□ -1.16
UBR3-209ENST00000477461 CDK5R2Q13319 367 aa7.81□□□□□ -1.16
UBR3-209ENST00000477461 SEZ6L2Q6UXD5 910 aa7.81□□□□□ -1.16
UBR3-209ENST00000477461 FANCD2OSQ96PS1 177 aa7.81□□□□□ -1.16
UBR3-209ENST00000477461 TMEM39AQ9NV64 488 aa7.81□□□□□ -1.16
UBR3-209ENST00000477461 CRIM1Q9NZV1 1036 aa7.81□□□□□ -1.16
UBR3-209ENST00000477461 NISCHQ9Y2I1 1504 aa7.81□□□□□ -1.16
UBR3-209ENST00000477461 HCLS1P14317 486 aaPredicted RBP7.8□□□□□ -1.16
UBR3-209ENST00000477461 MAPK8P45983 427 aa7.8□□□□□ -1.16
UBR3-209ENST00000477461 ID3Q02535 119 aa7.8□□□□□ -1.16
UBR3-209ENST00000477461 PPP2R3AQ06190 1150 aa7.8□□□□□ -1.16
UBR3-209ENST00000477461 DSC3Q14574 896 aa7.8□□□□□ -1.16
UBR3-209ENST00000477461 CPSF6Q16630 551 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBR3-209ENST00000477461 SETDB2Q96T68 719 aa7.8□□□□□ -1.16
UBR3-209ENST00000477461 DISC1Q9NRI5 854 aa7.8□□□□□ -1.16
UBR3-209ENST00000477461 ADGRE2Q9UHX3 823 aa7.8□□□□□ -1.16
UBR3-209ENST00000477461 GNEQ9Y223 722 aaKnown RBP7.8□□□□□ -1.16
UBR3-209ENST00000477461 CYP27A1Q02318 531 aa7.79□□□□□ -1.16
UBR3-209ENST00000477461 TTLL4Q14679 1199 aa7.79□□□□□ -1.16
UBR3-209ENST00000477461 MAP1SQ66K74 1059 aaPredicted RBP7.79□□□□□ -1.16
UBR3-209ENST00000477461 OGFOD3Q6PK18 319 aa7.79□□□□□ -1.16
UBR3-209ENST00000477461 MPRIPQ6WCQ1 1025 aa7.79□□□□□ -1.16
UBR3-209ENST00000477461 NFXL1Q6ZNB6 911 aa7.79□□□□□ -1.16
UBR3-209ENST00000477461 CBX8Q9HC52 389 aa7.79□□□□□ -1.16
UBR3-209ENST00000477461 BSDC1Q9NW68 430 aaPredicted RBP7.79□□□□□ -1.16
UBR3-209ENST00000477461 PDZD3Q86UT5 571 aa7.78□□□□□ -1.16
UBR3-209ENST00000477461 SULF2Q8IWU5 870 aa7.78□□□□□ -1.16
UBR3-209ENST00000477461 SMYD4Q8IYR2 804 aaPredicted RBP7.78□□□□□ -1.16
UBR3-209ENST00000477461 FLCNQ8NFG4 579 aa7.78□□□□□ -1.16
UBR3-209ENST00000477461 KRTAP4-12Q9BQ66 201 aa7.78□□□□□ -1.16
UBR3-209ENST00000477461 ATXN3LQ9H3M9 355 aa7.78□□□□□ -1.16
UBR3-209ENST00000477461 SSU72Q9NP77 194 aaKnown RBP7.78□□□□□ -1.16
UBR3-209ENST00000477461 WWC3Q9ULE0 1092 aa7.78□□□□□ -1.16
UBR3-209ENST00000477461 TREHO43280 583 aa7.77□□□□□ -1.17
UBR3-209ENST00000477461 FBXO24O75426 580 aa7.77□□□□□ -1.17
UBR3-209ENST00000477461 FAM87AP0C7U9 286 aa7.77□□□□□ -1.17
UBR3-209ENST00000477461 ARNTP27540 789 aa7.77□□□□□ -1.17
UBR3-209ENST00000477461 ENOX2Q16206 610 aaKnown RBP7.77□□□□□ -1.17
UBR3-209ENST00000477461 KIF4BQ2VIQ3 1234 aa7.77□□□□□ -1.17
UBR3-209ENST00000477461 RNF114Q9Y508 228 aa7.77□□□□□ -1.17
UBR3-209ENST00000477461 CSADQ9Y600 493 aa7.77□□□□□ -1.17
UBR3-209ENST00000477461 IVNS1ABPQ9Y6Y0 642 aa7.77□□□□□ -1.17
UBR3-209ENST00000477461 PRNPP04156 253 aa7.76□□□□□ -1.17
UBR3-209ENST00000477461 XRCC5P13010 732 aaKnown RBP7.76□□□□□ -1.17
UBR3-209ENST00000477461 BNIP3Q12983 259 aa7.76□□□□□ -1.17
UBR3-209ENST00000477461 TPTE2Q6XPS3 522 aa7.76□□□□□ -1.17
UBR3-209ENST00000477461 VSIG10LQ86VR7 867 aa7.76□□□□□ -1.17
UBR3-209ENST00000477461 FAM181AQ8N9Y4 354 aa7.76□□□□□ -1.17
UBR3-209ENST00000477461 GRIN3AQ8TCU5 1115 aa7.76□□□□□ -1.17
UBR3-209ENST00000477461 PCDHGC5Q9Y5F6 944 aa7.76□□□□□ -1.17
UBR3-209ENST00000477461 SYNGAP1Q96PV0 1343 aa7.76□□□□□ -1.17
UBR3-209ENST00000477461 LEFTY1O75610 366 aa7.75□□□□□ -1.17
UBR3-209ENST00000477461 COL19A1Q14993 1142 aa7.75□□□□□ -1.17
UBR3-209ENST00000477461 CYP27C1Q4G0S4 372 aa7.75□□□□□ -1.17
UBR3-209ENST00000477461 KRTAP1-3Q8IUG1 177 aa7.75□□□□□ -1.17
UBR3-209ENST00000477461 GPBAR1Q8TDU6 330 aa7.75□□□□□ -1.17
UBR3-209ENST00000477461 ACSBG1Q96GR2 724 aa7.75□□□□□ -1.17
UBR3-209ENST00000477461 FBXL18Q96ME1 805 aa7.75□□□□□ -1.17
UBR3-209ENST00000477461 KRT82Q9NSB4 513 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms