RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 USP40Q9NVE5 1235 aa20.49■□□□□ 0.87
RPN1-202ENST00000476931 ZFYP08048 801 aaPredicted RBP20.48■□□□□ 0.87
RPN1-202ENST00000476931 C1QTNF8P60827 252 aa20.48■□□□□ 0.87
RPN1-202ENST00000476931 TSHZ3Q63HK5 1081 aa20.48■□□□□ 0.87
RPN1-202ENST00000476931 USP48Q86UV5 1035 aa20.48■□□□□ 0.87
RPN1-202ENST00000476931 MAGEB6Q8N7X4 407 aa20.48■□□□□ 0.87
RPN1-202ENST00000476931 ZNF384Q8TF68 577 aa20.48■□□□□ 0.87
RPN1-202ENST00000476931 EVI5LQ96CN4 794 aa20.48■□□□□ 0.87
RPN1-202ENST00000476931 PCDHAC2Q9Y5I4 1007 aa20.48■□□□□ 0.87
RPN1-202ENST00000476931 CYP7A1P22680 504 aa20.47■□□□□ 0.87
RPN1-202ENST00000476931 UBE3CQ15386 1083 aa20.47■□□□□ 0.87
RPN1-202ENST00000476931 CDC42EP5Q6NZY7 148 aa20.47■□□□□ 0.87
RPN1-202ENST00000476931 FAM83AQ86UY5 434 aa20.47■□□□□ 0.87
RPN1-202ENST00000476931 ADAMTSL1Q8N6G6 1762 aa20.46■□□□□ 0.87
RPN1-202ENST00000476931 NPM3O75607 178 aaKnown RBP20.46■□□□□ 0.87
RPN1-202ENST00000476931 PDE6AP16499 860 aa20.46■□□□□ 0.87
RPN1-202ENST00000476931 BTDP43251 543 aa20.46■□□□□ 0.87
RPN1-202ENST00000476931 EDC3Q96F86 508 aaKnown RBP20.46■□□□□ 0.87
RPN1-202ENST00000476931 DEFB129Q9H1M3 183 aa20.46■□□□□ 0.87
RPN1-202ENST00000476931 VEZTQ9HBM0 779 aa20.46■□□□□ 0.87
RPN1-202ENST00000476931 ASTN2O75129 1339 aaPredicted RBP20.46■□□□□ 0.87
RPN1-202ENST00000476931 CLRN2A0PK11 232 aa20.45■□□□□ 0.86
RPN1-202ENST00000476931 ADD2P35612 726 aa20.45■□□□□ 0.86
RPN1-202ENST00000476931 IDI2Q9BXS1 227 aa20.45■□□□□ 0.86
RPN1-202ENST00000476931 GLIS2Q9BZE0 524 aaPredicted RBP20.45■□□□□ 0.86
RPN1-202ENST00000476931 PASKQ96RG2 1323 aa20.45■□□□□ 0.86
RPN1-202ENST00000476931 PDE4AP27815 886 aa20.44■□□□□ 0.86
RPN1-202ENST00000476931 SUPT20HL1Q3ZLR7 823 aa20.44■□□□□ 0.86
RPN1-202ENST00000476931 ENTPD3O75355 529 aa20.43■□□□□ 0.86
RPN1-202ENST00000476931 RASA3Q14644 834 aa20.43■□□□□ 0.86
RPN1-202ENST00000476931 HOOK2Q96ED9 719 aa20.43■□□□□ 0.86
RPN1-202ENST00000476931 ZNF532Q9HCE3 1301 aa20.43■□□□□ 0.86
RPN1-202ENST00000476931 TCRBV5S4A2TA0A5A2 114 aa20.42■□□□□ 0.86
RPN1-202ENST00000476931 TRIM6-TRIM34B2RNG4 842 aa20.42■□□□□ 0.86
RPN1-202ENST00000476931 TCP10L2B9ZVM9 353 aa20.42■□□□□ 0.86
RPN1-202ENST00000476931 RNF113AO15541 343 aaKnown RBP20.42■□□□□ 0.86
RPN1-202ENST00000476931 NF2P35240 595 aa20.42■□□□□ 0.86
RPN1-202ENST00000476931 RHBDL3P58872 404 aa20.42■□□□□ 0.86
RPN1-202ENST00000476931 FAM151AQ8WW52 585 aa20.42■□□□□ 0.86
RPN1-202ENST00000476931 FSD1Q9BTV5 496 aa20.42■□□□□ 0.86
RPN1-202ENST00000476931 AATFQ9NY61 560 aaKnown RBP eCLIP20.42■□□□□ 0.86
RPN1-202ENST00000476931 MAGEB6P1A0A0J9YX57 407 aa20.41■□□□□ 0.86
RPN1-202ENST00000476931 APLP1P51693 650 aa20.41■□□□□ 0.86
RPN1-202ENST00000476931 ADM5C9JUS6 153 aa20.4■□□□□ 0.86
RPN1-202ENST00000476931 ADGRA1Q86SQ6 560 aa20.4■□□□□ 0.86
RPN1-202ENST00000476931 TEX11Q8IYF3 940 aa20.4■□□□□ 0.86
RPN1-202ENST00000476931 APPBP2Q92624 585 aa20.4■□□□□ 0.86
RPN1-202ENST00000476931 CDCA5Q96FF9 252 aa20.4■□□□□ 0.86
RPN1-202ENST00000476931 MYH2Q9UKX2 1941 aa20.39■□□□□ 0.86
RPN1-202ENST00000476931 TMEM88BA6NKF7 163 aa20.39■□□□□ 0.85
RPN1-202ENST00000476931 HIP1O00291 1037 aa20.39■□□□□ 0.85
RPN1-202ENST00000476931 TRAF5O00463 557 aa20.39■□□□□ 0.85
RPN1-202ENST00000476931 WDHD1O75717 1129 aaPredicted RBP20.39■□□□□ 0.85
RPN1-202ENST00000476931 FKBP1BP68106 108 aa20.39■□□□□ 0.85
RPN1-202ENST00000476931 TTC22Q5TAA0 569 aa20.39■□□□□ 0.85
RPN1-202ENST00000476931 RILPL2Q969X0 211 aa20.39■□□□□ 0.85
RPN1-202ENST00000476931 RIOK1Q9BRS2 568 aaKnown RBP20.39■□□□□ 0.85
RPN1-202ENST00000476931 CELF2O95319 508 aaKnown RBP20.38■□□□□ 0.85
RPN1-202ENST00000476931 HSPA6P17066 643 aa20.38■□□□□ 0.85
RPN1-202ENST00000476931 CACNB3P54284 484 aa20.38■□□□□ 0.85
RPN1-202ENST00000476931 C2orf69Q8N8R5 385 aa20.38■□□□□ 0.85
RPN1-202ENST00000476931 MIGA1Q8NAN2 632 aa20.38■□□□□ 0.85
RPN1-202ENST00000476931 SH3RF3Q8TEJ3 882 aaPredicted RBP20.38■□□□□ 0.85
RPN1-202ENST00000476931 CRNKL1Q9BZJ0 848 aaKnown RBP20.38■□□□□ 0.85
RPN1-202ENST00000476931 FAM198AQ9UFP1 575 aa20.38■□□□□ 0.85
RPN1-202ENST00000476931 RFX7Q2KHR2 1363 aa20.37■□□□□ 0.85
RPN1-202ENST00000476931 PPP1R12BO60237 982 aaPredicted RBP20.37■□□□□ 0.85
RPN1-202ENST00000476931 RGS3P49796 1198 aa20.37■□□□□ 0.85
RPN1-202ENST00000476931 NFIAQ12857 509 aa20.37■□□□□ 0.85
RPN1-202ENST00000476931 CST9Q5W186 159 aa20.37■□□□□ 0.85
RPN1-202ENST00000476931 AIDAQ96BJ3 306 aa20.37■□□□□ 0.85
RPN1-202ENST00000476931 DHX36Q9H2U1 1008 aaKnown RBP20.37■□□□□ 0.85
RPN1-202ENST00000476931 CREBZFQ9NS37 354 aa20.37■□□□□ 0.85
RPN1-202ENST00000476931 POLR2AP24928 1970 aaKnown RBP20.36■□□□□ 0.85
RPN1-202ENST00000476931 UNCXA6NJT0 531 aa20.36■□□□□ 0.85
RPN1-202ENST00000476931 DYNLL1P63167 89 aaKnown RBP20.36■□□□□ 0.85
RPN1-202ENST00000476931 TGFBRAP1Q8WUH2 860 aa20.36■□□□□ 0.85
RPN1-202ENST00000476931 TEPSINQ96N21 525 aa20.36■□□□□ 0.85
RPN1-202ENST00000476931 TMEM39BQ9GZU3 492 aa20.36■□□□□ 0.85
RPN1-202ENST00000476931 SCAF8Q9UPN6 1271 aaKnown RBP20.36■□□□□ 0.85
RPN1-202ENST00000476931 CNTNAP1P78357 1384 aa20.35■□□□□ 0.85
RPN1-202ENST00000476931 RPAP1Q9BWH6 1393 aaPredicted RBP20.35■□□□□ 0.85
RPN1-202ENST00000476931 DOCK2Q92608 1830 aa20.35■□□□□ 0.85
RPN1-202ENST00000476931 GNAT2P19087 354 aa20.35■□□□□ 0.85
RPN1-202ENST00000476931 USP5P45974 858 aa20.35■□□□□ 0.85
RPN1-202ENST00000476931 TCP10Q12799 353 aa20.35■□□□□ 0.85
RPN1-202ENST00000476931 GBA2Q9HCG7 927 aaPredicted RBP20.35■□□□□ 0.85
RPN1-202ENST00000476931 HELLSQ9NRZ9 838 aa20.35■□□□□ 0.85
RPN1-202ENST00000476931 ATP8A2Q9NTI2 1148 aa20.35■□□□□ 0.85
RPN1-202ENST00000476931 SDSP20132 328 aa20.34■□□□□ 0.85
RPN1-202ENST00000476931 ZMYM1Q5SVZ6 1142 aa20.34■□□□□ 0.85
RPN1-202ENST00000476931 NBPF12Q5TAG4 269 aaPredicted RBP20.34■□□□□ 0.85
RPN1-202ENST00000476931 PRAMEF18Q5VWM3 479 aa20.34■□□□□ 0.85
RPN1-202ENST00000476931 DCAF15Q66K64 600 aa20.34■□□□□ 0.85
RPN1-202ENST00000476931 ARMC9Q7Z3E5 817 aa20.34■□□□□ 0.85
RPN1-202ENST00000476931 ZSCAN29Q8IWY8 852 aaPredicted RBP20.34■□□□□ 0.85
RPN1-202ENST00000476931 DDRGK1Q96HY6 314 aa20.34■□□□□ 0.85
RPN1-202ENST00000476931 PUS7LQ9H0K6 701 aaKnown RBP20.34■□□□□ 0.85
RPN1-202ENST00000476931 OSBPL5Q9H0X9 879 aaPredicted RBP20.34■□□□□ 0.85
RPN1-202ENST00000476931 ZNF408Q9H9D4 720 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms