RNA–Protein interactions for RNA: ENST00000476916.5

KPNA1-206, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-206ENST00000476916 Q7L0L9 218 aa10.12□□□□□ -0.79
KPNA1-206ENST00000476916 GAS2L2Q8NHY3 880 aa10.12□□□□□ -0.79
KPNA1-206ENST00000476916 NKX2-3Q8TAU0 364 aa10.12□□□□□ -0.79
KPNA1-206ENST00000476916 POLR3GLQ9BT43 218 aa10.12□□□□□ -0.79
KPNA1-206ENST00000476916 RNF186Q9NXI6 227 aa10.12□□□□□ -0.79
KPNA1-206ENST00000476916 PIK3C2GO75747 1445 aa10.12□□□□□ -0.79
KPNA1-206ENST00000476916 USP47Q96K76 1375 aa10.12□□□□□ -0.79
KPNA1-206ENST00000476916 MUC6Q6W4X9 2439 aa10.11□□□□□ -0.79
KPNA1-206ENST00000476916 ERVH48-1M5A8F1 160 aa10.11□□□□□ -0.79
KPNA1-206ENST00000476916 TRPA1O75762 1119 aa10.11□□□□□ -0.79
KPNA1-206ENST00000476916 FAM129BQ96TA1 746 aa10.11□□□□□ -0.79
KPNA1-206ENST00000476916 IQSEC3Q9UPP2 1182 aaPredicted RBP10.11□□□□□ -0.79
KPNA1-206ENST00000476916 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.11□□□□□ -0.79
KPNA1-206ENST00000476916 A0A1W2PPC1 479 aa10.1□□□□□ -0.79
KPNA1-206ENST00000476916 FZD6O60353 706 aa10.1□□□□□ -0.79
KPNA1-206ENST00000476916 EN2P19622 333 aaPredicted RBP10.1□□□□□ -0.79
KPNA1-206ENST00000476916 VARSP26640 1264 aaKnown RBP10.1□□□□□ -0.79
KPNA1-206ENST00000476916 SCNN1DP51172 638 aa10.1□□□□□ -0.79
KPNA1-206ENST00000476916 ATP2B2Q01814 1243 aa10.1□□□□□ -0.79
KPNA1-206ENST00000476916 SAFB2Q14151 953 aaKnown RBP eCLIP10.1□□□□□ -0.79
KPNA1-206ENST00000476916 ALKBH2Q6NS38 261 aa10.1□□□□□ -0.79
KPNA1-206ENST00000476916 PNMA8AQ86V59 439 aaPredicted RBP10.1□□□□□ -0.79
KPNA1-206ENST00000476916 ALKBH8Q96BT7 664 aaKnown RBP10.1□□□□□ -0.79
KPNA1-206ENST00000476916 SBNO2Q9Y2G9 1366 aa10.1□□□□□ -0.79
KPNA1-206ENST00000476916 EPHX2P34913 555 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 EIF1AXP47813 144 aaKnown RBP10.09□□□□□ -0.79
KPNA1-206ENST00000476916 RAB15P59190 212 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 INTS3Q68E01 1043 aaKnown RBP10.09□□□□□ -0.79
KPNA1-206ENST00000476916 CC2D2BQ6DHV5 1058 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 NLRP13Q86W25 1043 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 NLGN1Q8N2Q7 840 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 KRTAP3-3Q9BYR6 98 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 KRTAP3-2Q9BYR7 98 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 OSBPL3Q9H4L5 887 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 HACL1Q9UJ83 578 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 INSRP06213 1382 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 EIF3AQ14152 1382 aaKnown RBP10.09□□□□□ -0.79
KPNA1-206ENST00000476916 AKAP11Q9UKA4 1901 aa10.09□□□□□ -0.79
KPNA1-206ENST00000476916 BACH1O14867 736 aa10.08□□□□□ -0.8
KPNA1-206ENST00000476916 IL2RBP14784 551 aa10.08□□□□□ -0.8
KPNA1-206ENST00000476916 DNAJA1P31689 397 aaKnown RBP10.08□□□□□ -0.8
KPNA1-206ENST00000476916 TNNI2P48788 182 aa10.08□□□□□ -0.8
KPNA1-206ENST00000476916 EPHA4P54764 986 aa10.08□□□□□ -0.8
KPNA1-206ENST00000476916 EGFLAMQ63HQ2 1017 aa10.08□□□□□ -0.8
KPNA1-206ENST00000476916 SDE2Q6IQ49 451 aa10.08□□□□□ -0.8
KPNA1-206ENST00000476916 C16orf46Q6P387 395 aa10.08□□□□□ -0.8
KPNA1-206ENST00000476916 VASH1Q7L8A9 365 aaPredicted RBP10.08□□□□□ -0.8
KPNA1-206ENST00000476916 CACNA1BQ00975 2339 aa10.08□□□□□ -0.8
KPNA1-206ENST00000476916 GPR182O15218 404 aa10.07□□□□□ -0.8
KPNA1-206ENST00000476916 GDF10P55107 478 aa10.07□□□□□ -0.8
KPNA1-206ENST00000476916 SOGA3Q5TF21 947 aa10.07□□□□□ -0.8
KPNA1-206ENST00000476916 SCG3Q8WXD2 468 aaKnown RBP10.07□□□□□ -0.8
KPNA1-206ENST00000476916 SAP130Q9H0E3 1048 aa10.07□□□□□ -0.8
KPNA1-206ENST00000476916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.07□□□□□ -0.89e-7■■■■■ 208.4
KPNA1-206ENST00000476916 HDAC9Q9UKV0 1011 aa10.07□□□□□ -0.8
KPNA1-206ENST00000476916 PARP3Q9Y6F1 533 aa10.07□□□□□ -0.8
KPNA1-206ENST00000476916 TRAF5O00463 557 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 WNT7BP56706 349 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 TMF1P82094 1093 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 SKOR1P84550 965 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 TRIM32Q13049 653 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 ALG1LQ6GMV1 187 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 VTI1AQ96AJ9 217 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 PRAM1Q96QH2 718 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 PIF1Q9H611 641 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.06□□□□□ -0.8
KPNA1-206ENST00000476916 EMILIN1Q9Y6C2 1016 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 BDP1A6H8Y1 2624 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 ACEP12821 1306 aa10.06□□□□□ -0.8
KPNA1-206ENST00000476916 POLR3AO14802 1390 aaPredicted RBP10.05□□□□□ -0.8
KPNA1-206ENST00000476916 ZBTB24O43167 697 aaPredicted RBP10.05□□□□□ -0.8
KPNA1-206ENST00000476916 INHAP05111 366 aa10.05□□□□□ -0.8
KPNA1-206ENST00000476916 PTPN5P54829 565 aa10.05□□□□□ -0.8
KPNA1-206ENST00000476916 ARID5AQ03989 594 aa10.05□□□□□ -0.8
KPNA1-206ENST00000476916 AAMPQ13685 434 aa10.05□□□□□ -0.8
KPNA1-206ENST00000476916 ENOX2Q16206 610 aaKnown RBP10.05□□□□□ -0.8
KPNA1-206ENST00000476916 DDX54Q8TDD1 881 aaKnown RBP10.05□□□□□ -0.8
KPNA1-206ENST00000476916 SLC4A9Q96Q91 983 aa10.05□□□□□ -0.8
KPNA1-206ENST00000476916 SETDB2Q96T68 719 aa10.05□□□□□ -0.8
KPNA1-206ENST00000476916 CDK15Q96Q40 435 aa10.04□□□□□ -0.8
KPNA1-206ENST00000476916 TSPAN10Q9H1Z9 355 aaPredicted RBP10.04□□□□□ -0.8
KPNA1-206ENST00000476916 C14orf93Q9H972 538 aaKnown RBP10.04□□□□□ -0.8
KPNA1-206ENST00000476916 STIM2Q9P246 746 aa10.04□□□□□ -0.8
KPNA1-206ENST00000476916 CPSF1Q10570 1443 aaKnown RBP10.04□□□□□ -0.8
KPNA1-206ENST00000476916 NCOR1O75376 2440 aa10.04□□□□□ -0.8
KPNA1-206ENST00000476916 RPTORQ8N122 1335 aa10.04□□□□□ -0.8
KPNA1-206ENST00000476916 PPP1R18Q6NYC8 613 aa10.03□□□□□ -0.8
KPNA1-206ENST00000476916 SYNE4Q8N205 404 aa10.03□□□□□ -0.8
KPNA1-206ENST00000476916 ZSWIM4Q9H7M6 989 aa10.03□□□□□ -0.8
KPNA1-206ENST00000476916 HCN4Q9Y3Q4 1203 aa10.03□□□□□ -0.8
KPNA1-206ENST00000476916 TNFRSF10BO14763 440 aa10.02□□□□□ -0.81
KPNA1-206ENST00000476916 STAU1O95793 577 aaKnown RBP10.02□□□□□ -0.81
KPNA1-206ENST00000476916 GNA15P30679 374 aa10.02□□□□□ -0.81
KPNA1-206ENST00000476916 FOXK2Q01167 660 aa10.02□□□□□ -0.81
KPNA1-206ENST00000476916 DHX9Q08211 1270 aaKnown RBP10.02□□□□□ -0.81
KPNA1-206ENST00000476916 STAG2Q8N3U4 1231 aa10.02□□□□□ -0.81
KPNA1-206ENST00000476916 ZNF296Q8WUU4 475 aaPredicted RBP10.02□□□□□ -0.81
KPNA1-206ENST00000476916 NIF3L1Q9GZT8 377 aa10.02□□□□□ -0.81
KPNA1-206ENST00000476916 ETNK1Q9HBU6 452 aa10.02□□□□□ -0.81
KPNA1-206ENST00000476916 DDX41Q9UJV9 622 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms