RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 FAM205AQ6ZU69 1335 aa14.56□□□□□ -0.08
MRPL55-227ENST00000475832 AKAP11Q9UKA4 1901 aa14.56□□□□□ -0.08
MRPL55-227ENST00000475832 COL1A1P02452 1464 aaPredicted RBP14.56□□□□□ -0.08
MRPL55-227ENST00000475832 PATL2C9JE40 543 aaKnown RBP14.55□□□□□ -0.08
MRPL55-227ENST00000475832 HSP90AA1P07900 732 aaKnown RBP14.55□□□□□ -0.08
MRPL55-227ENST00000475832 HMGB1P09429 215 aaKnown RBP14.55□□□□□ -0.08
MRPL55-227ENST00000475832 MECOMQ03112 1051 aa14.55□□□□□ -0.08
MRPL55-227ENST00000475832 TSGA10IPQ3SY00 556 aa14.55□□□□□ -0.08
MRPL55-227ENST00000475832 JAKMIP1Q96N16 626 aaKnown RBP14.55□□□□□ -0.08
MRPL55-227ENST00000475832 STRBPQ96SI9 672 aaKnown RBP14.55□□□□□ -0.08
MRPL55-227ENST00000475832 TBC1D2Q9BYX2 928 aa14.55□□□□□ -0.08
MRPL55-227ENST00000475832 K7ELQ4 463 aaPredicted RBP14.54□□□□□ -0.08
MRPL55-227ENST00000475832 ZNF213O14771 459 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 CASTP20810 708 aaKnown RBP14.54□□□□□ -0.08
MRPL55-227ENST00000475832 GTF2IP78347 998 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 KIAA2012Q0VF49 1180 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 DOK7Q18PE1 504 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 MFSD14BQ5SR56 506 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 VPS53Q5VIR6 699 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 DPY19L2Q6NUT2 758 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 BLOC1S2Q6QNY1 142 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 CRNKL1Q9BZJ0 848 aaKnown RBP14.54□□□□□ -0.08
MRPL55-227ENST00000475832 NAPBQ9H115 298 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 ARMT1Q9H993 441 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 JAG2Q9Y219 1238 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 SLC4A4Q9Y6R1 1079 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 CNTNAP1P78357 1384 aa14.54□□□□□ -0.08
MRPL55-227ENST00000475832 ZMYM6O95789 1325 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 POTECB2RU33 542 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 PPIP5K2O43314 1243 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 PRDX5P30044 214 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 TDO2P48775 406 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 ANKRD1Q15327 319 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 ALX1Q15699 326 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 TTLL5Q6EMB2 1281 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 CHADLQ6NUI6 762 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 RASEFQ8IZ41 740 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 MIGA1Q8NAN2 632 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 JDP2Q8WYK2 163 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 WBP1LQ9NX94 342 aa14.53□□□□□ -0.08
MRPL55-227ENST00000475832 ZNF541Q9H0D2 1346 aa14.52□□□□□ -0.08
MRPL55-227ENST00000475832 FGAP02671 866 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 CYP21A2P08686 494 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 PLCG2P16885 1265 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 FKBP1AP62942 108 aaKnown RBP14.52□□□□□ -0.09
MRPL55-227ENST00000475832 TRDNQ13061 729 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 RUFY3Q7L099 469 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 AMOTL1Q8IY63 956 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 LCORLQ8N3X6 602 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 LARGE2Q8N3Y3 721 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 L3MBTL3Q96JM7 780 aaPredicted RBP14.52□□□□□ -0.09
MRPL55-227ENST00000475832 NEK1Q96PY6 1258 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 ZSWIM6Q9HCJ5 1215 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 PDRG1Q9NUG6 133 aa14.52□□□□□ -0.09
MRPL55-227ENST00000475832 DOCK2Q92608 1830 aa14.51□□□□□ -0.09
MRPL55-227ENST00000475832 ECE2O60344 883 aa14.51□□□□□ -0.09
MRPL55-227ENST00000475832 DDNO94850 711 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-227ENST00000475832 VEGFBP49765 207 aa14.51□□□□□ -0.09
MRPL55-227ENST00000475832 AOC3Q16853 763 aa14.51□□□□□ -0.09
MRPL55-227ENST00000475832 STRIP1Q5VSL9 837 aa14.51□□□□□ -0.09
MRPL55-227ENST00000475832 GIMAP6Q6P9H5 292 aa14.51□□□□□ -0.09
MRPL55-227ENST00000475832 RALYLQ86SE5 291 aaKnown RBP14.51□□□□□ -0.09
MRPL55-227ENST00000475832 IFNL3Q8IZI9 196 aa14.51□□□□□ -0.09
MRPL55-227ENST00000475832 UPF3BQ9BZI7 483 aaKnown RBP14.51□□□□□ -0.09
MRPL55-227ENST00000475832 DBNDD1Q9H9R9 158 aa14.51□□□□□ -0.09
MRPL55-227ENST00000475832 MROH7-TTC4A0A0A0MT08 1334 aa14.5□□□□□ -0.09
MRPL55-227ENST00000475832 USP17L3A6NCW0 530 aa14.5□□□□□ -0.09
MRPL55-227ENST00000475832 USP17L4A6NCW7 530 aa14.5□□□□□ -0.09
MRPL55-227ENST00000475832 HSPA8P11142 646 aaKnown RBP14.5□□□□□ -0.09
MRPL55-227ENST00000475832 SLC4A3P48751 1232 aa14.5□□□□□ -0.09
MRPL55-227ENST00000475832 FGD1P98174 961 aa14.5□□□□□ -0.09
MRPL55-227ENST00000475832 USP17L1Q7RTZ2 530 aa14.5□□□□□ -0.09
MRPL55-227ENST00000475832 GPC2Q8N158 579 aa14.5□□□□□ -0.09
MRPL55-227ENST00000475832 RIOK1Q9BRS2 568 aaKnown RBP14.5□□□□□ -0.09
MRPL55-227ENST00000475832 ATP8A2Q9NTI2 1148 aa14.5□□□□□ -0.09
MRPL55-227ENST00000475832 AATFQ9NY61 560 aaKnown RBP eCLIP14.5□□□□□ -0.09
MRPL55-227ENST00000475832 MYH7P12883 1935 aa14.49□□□□□ -0.09
MRPL55-227ENST00000475832 SLC3A2P08195 630 aaKnown RBP14.49□□□□□ -0.09
MRPL55-227ENST00000475832 RPS6KB1P23443 525 aa14.49□□□□□ -0.09
MRPL55-227ENST00000475832 NIM1KQ8IY84 436 aa14.49□□□□□ -0.09
MRPL55-227ENST00000475832 FAM163AQ96GL9 167 aaPredicted RBP14.49□□□□□ -0.09
MRPL55-227ENST00000475832 ZSCAN31Q96LW9 406 aaPredicted RBP14.49□□□□□ -0.09
MRPL55-227ENST00000475832 RNF41Q9H4P4 317 aaPredicted RBP14.49□□□□□ -0.09
MRPL55-227ENST00000475832 ZNRF3Q9ULT6 936 aa14.49□□□□□ -0.09
MRPL55-227ENST00000475832 MYO3BQ8WXR4 1341 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 MAST2Q6P0Q8 1798 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 GSG1L2A8MUP6 293 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 E7EWF7 191 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 USP5P45974 858 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 PPP4CP60510 307 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 DYNLL1P63167 89 aaKnown RBP14.48□□□□□ -0.09
MRPL55-227ENST00000475832 MAP2K1Q02750 393 aaPredicted RBP14.48□□□□□ -0.09
MRPL55-227ENST00000475832 ADCK5Q3MIX3 580 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 ADGRA1Q86SQ6 560 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 NCOA7Q8NI08 942 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 ALDH8A1Q9H2A2 487 aaPredicted RBP14.48□□□□□ -0.09
MRPL55-227ENST00000475832 CNNM2Q9H8M5 875 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 TTF2Q9UNY4 1162 aaKnown RBP14.48□□□□□ -0.09
MRPL55-227ENST00000475832 LIMCH1Q9UPQ0 1083 aa14.48□□□□□ -0.09
MRPL55-227ENST00000475832 MYH13Q9UKX3 1938 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms