RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 SLFNL1Q499Z3 407 aa26.81■■□□□ 1.88
MCF2L2-209ENST00000475664 RNF113AO15541 343 aaKnown RBP26.8■■□□□ 1.88
MCF2L2-209ENST00000475664 ZFYP08048 801 aaPredicted RBP26.8■■□□□ 1.88
MCF2L2-209ENST00000475664 LRRFIP1Q32MZ4 808 aaKnown RBP26.8■■□□□ 1.88
MCF2L2-209ENST00000475664 TICAM2Q86XR7 235 aa26.8■■□□□ 1.88
MCF2L2-209ENST00000475664 ZC3H15Q8WU90 426 aaKnown RBP26.8■■□□□ 1.88
MCF2L2-209ENST00000475664 PGAP2Q9UHJ9 254 aa26.8■■□□□ 1.88
MCF2L2-209ENST00000475664 POLR2AP24928 1970 aaKnown RBP26.8■■□□□ 1.88
MCF2L2-209ENST00000475664 SPDYE2Q495Y8 402 aa26.79■■□□□ 1.88
MCF2L2-209ENST00000475664 BMP2KLQ5H9B9 411 aa26.79■■□□□ 1.88
MCF2L2-209ENST00000475664 LDHDQ86WU2 507 aa26.79■■□□□ 1.88
MCF2L2-209ENST00000475664 TDRD3Q9H7E2 651 aaKnown RBP26.79■■□□□ 1.88
MCF2L2-209ENST00000475664 CDK5RAP2Q96SN8 1893 aa26.79■■□□□ 1.88
MCF2L2-209ENST00000475664 MYO1BO43795 1136 aa26.78■■□□□ 1.88
MCF2L2-209ENST00000475664 PPP4CP60510 307 aa26.78■■□□□ 1.88
MCF2L2-209ENST00000475664 CDC42EP5Q6NZY7 148 aa26.78■■□□□ 1.88
MCF2L2-209ENST00000475664 GGA3Q9NZ52 723 aa26.78■■□□□ 1.88
MCF2L2-209ENST00000475664 CLRN2A0PK11 232 aa26.77■■□□□ 1.88
MCF2L2-209ENST00000475664 RHBDL3P58872 404 aa26.77■■□□□ 1.88
MCF2L2-209ENST00000475664 ANGEL2Q5VTE6 544 aaKnown RBP26.77■■□□□ 1.88
MCF2L2-209ENST00000475664 MIGA1Q8NAN2 632 aa26.77■■□□□ 1.88
MCF2L2-209ENST00000475664 APPBP2Q92624 585 aa26.77■■□□□ 1.88
MCF2L2-209ENST00000475664 NOL10Q9BSC4 688 aaKnown RBP26.77■■□□□ 1.88
MCF2L2-209ENST00000475664 AATFQ9NY61 560 aaKnown RBP eCLIP26.77■■□□□ 1.88
MCF2L2-209ENST00000475664 ZNF70Q9UC06 446 aaPredicted RBP26.77■■□□□ 1.88
MCF2L2-209ENST00000475664 FOCADQ5VW36 1801 aa26.76■■□□□ 1.88
MCF2L2-209ENST00000475664 PITPNM2Q9BZ72 1349 aa26.76■■□□□ 1.87
MCF2L2-209ENST00000475664 BAG3O95817 575 aa26.76■■□□□ 1.87
MCF2L2-209ENST00000475664 CLEC11AQ9Y240 323 aa26.76■■□□□ 1.87
MCF2L2-209ENST00000475664 DYNLL1P63167 89 aaKnown RBP26.75■■□□□ 1.87
MCF2L2-209ENST00000475664 ZMYM1Q5SVZ6 1142 aa26.75■■□□□ 1.87
MCF2L2-209ENST00000475664 RIOK1Q9BRS2 568 aaKnown RBP26.75■■□□□ 1.87
MCF2L2-209ENST00000475664 USP40Q9NVE5 1235 aa26.75■■□□□ 1.87
MCF2L2-209ENST00000475664 CERS3Q8IU89 383 aa26.74■■□□□ 1.87
MCF2L2-209ENST00000475664 OSBP2Q969R2 916 aa26.74■■□□□ 1.87
MCF2L2-209ENST00000475664 PUS7LQ9H0K6 701 aaKnown RBP26.74■■□□□ 1.87
MCF2L2-209ENST00000475664 MAGEB6P1A0A0J9YX57 407 aa26.73■■□□□ 1.87
MCF2L2-209ENST00000475664 PLCG2P16885 1265 aa26.73■■□□□ 1.87
MCF2L2-209ENST00000475664 APOBEC3FQ8IUX4 373 aaKnown RBP26.73■■□□□ 1.87
MCF2L2-209ENST00000475664 SH3RF3Q8TEJ3 882 aaPredicted RBP26.73■■□□□ 1.87
MCF2L2-209ENST00000475664 VEZTQ9HBM0 779 aa26.73■■□□□ 1.87
MCF2L2-209ENST00000475664 CACNB3P54284 484 aa26.72■■□□□ 1.87
MCF2L2-209ENST00000475664 FKBP1CQ5VVH2 108 aa26.72■■□□□ 1.87
MCF2L2-209ENST00000475664 CHADLQ6NUI6 762 aa26.72■■□□□ 1.87
MCF2L2-209ENST00000475664 DCPSQ96C86 337 aaKnown RBP26.72■■□□□ 1.87
MCF2L2-209ENST00000475664 TMOD2Q9NZR1 351 aa26.72■■□□□ 1.87
MCF2L2-209ENST00000475664 HIP1O00291 1037 aa26.71■■□□□ 1.87
MCF2L2-209ENST00000475664 WDHD1O75717 1129 aaPredicted RBP26.71■■□□□ 1.87
MCF2L2-209ENST00000475664 MBD4O95243 580 aa26.71■■□□□ 1.87
MCF2L2-209ENST00000475664 MAP1SQ66K74 1059 aaPredicted RBP26.71■■□□□ 1.87
MCF2L2-209ENST00000475664 LCORLQ8N3X6 602 aa26.71■■□□□ 1.87
MCF2L2-209ENST00000475664 FAM227BQ96M60 508 aa26.71■■□□□ 1.87
MCF2L2-209ENST00000475664 SEC62Q99442 399 aaKnown RBP26.71■■□□□ 1.87
MCF2L2-209ENST00000475664 M0R2C6 588 aa26.7■■□□□ 1.86
MCF2L2-209ENST00000475664 TOMM70O94826 608 aa26.7■■□□□ 1.86
MCF2L2-209ENST00000475664 NFIAQ12857 509 aa26.7■■□□□ 1.86
MCF2L2-209ENST00000475664 NMIQ13287 307 aaPredicted RBP26.7■■□□□ 1.86
MCF2L2-209ENST00000475664 TEX11Q8IYF3 940 aa26.7■■□□□ 1.86
MCF2L2-209ENST00000475664 IDI2Q9BXS1 227 aa26.7■■□□□ 1.86
MCF2L2-209ENST00000475664 ARMT1Q9H993 441 aa26.7■■□□□ 1.86
MCF2L2-209ENST00000475664 CNTNAP1P78357 1384 aa26.7■■□□□ 1.86
MCF2L2-209ENST00000475664 A0A0D9SFI3 127 aa26.69■■□□□ 1.86
MCF2L2-209ENST00000475664 KRT26Q7Z3Y9 468 aa26.69■■□□□ 1.86
MCF2L2-209ENST00000475664 RBM46Q8TBY0 533 aaKnown RBP26.69■■□□□ 1.86
MCF2L2-209ENST00000475664 AIDAQ96BJ3 306 aa26.69■■□□□ 1.86
MCF2L2-209ENST00000475664 HELLSQ9NRZ9 838 aa26.69■■□□□ 1.86
MCF2L2-209ENST00000475664 DIAPH3Q9NSV4 1193 aa26.69■■□□□ 1.86
MCF2L2-209ENST00000475664 FAM198AQ9UFP1 575 aa26.69■■□□□ 1.86
MCF2L2-209ENST00000475664 SCAF8Q9UPN6 1271 aaKnown RBP26.69■■□□□ 1.86
MCF2L2-209ENST00000475664 TCP10L2B9ZVM9 353 aa26.68■■□□□ 1.86
MCF2L2-209ENST00000475664 TNFAIP1Q13829 316 aa26.68■■□□□ 1.86
MCF2L2-209ENST00000475664 SULF1Q8IWU6 871 aa26.68■■□□□ 1.86
MCF2L2-209ENST00000475664 GLIS2Q9BZE0 524 aaPredicted RBP26.68■■□□□ 1.86
MCF2L2-209ENST00000475664 NAV1Q8NEY1 1877 aa26.68■■□□□ 1.86
MCF2L2-209ENST00000475664 ADM5C9JUS6 153 aa26.67■■□□□ 1.86
MCF2L2-209ENST00000475664 GPAA1O43292 621 aa26.67■■□□□ 1.86
MCF2L2-209ENST00000475664 NPM3O75607 178 aaKnown RBP26.67■■□□□ 1.86
MCF2L2-209ENST00000475664 CHMLP26374 656 aa26.67■■□□□ 1.86
MCF2L2-209ENST00000475664 CDC37L1Q7L3B6 337 aa26.67■■□□□ 1.86
MCF2L2-209ENST00000475664 FAM83AQ86UY5 434 aa26.67■■□□□ 1.86
MCF2L2-209ENST00000475664 STRBPQ96SI9 672 aaKnown RBP26.67■■□□□ 1.86
MCF2L2-209ENST00000475664 DDX4Q9NQI0 724 aaKnown RBP26.67■■□□□ 1.86
MCF2L2-209ENST00000475664 DDX60LQ5H9U9 1706 aaKnown RBP26.67■■□□□ 1.86
MCF2L2-209ENST00000475664 ENTPD3O75355 529 aa26.66■■□□□ 1.86
MCF2L2-209ENST00000475664 TNNI2P48788 182 aa26.66■■□□□ 1.86
MCF2L2-209ENST00000475664 USP48Q86UV5 1035 aa26.66■■□□□ 1.86
MCF2L2-209ENST00000475664 SMC1BQ8NDV3 1235 aa26.66■■□□□ 1.86
MCF2L2-209ENST00000475664 CRNKL1Q9BZJ0 848 aaKnown RBP26.66■■□□□ 1.86
MCF2L2-209ENST00000475664 DEFB129Q9H1M3 183 aa26.66■■□□□ 1.86
MCF2L2-209ENST00000475664 RASA3Q14644 834 aa26.65■■□□□ 1.86
MCF2L2-209ENST00000475664 MCMDC2Q4G0Z9 681 aa26.65■■□□□ 1.86
MCF2L2-209ENST00000475664 CWC27Q6UX04 472 aaKnown RBP26.65■■□□□ 1.86
MCF2L2-209ENST00000475664 TGFBRAP1Q8WUH2 860 aa26.65■■□□□ 1.86
MCF2L2-209ENST00000475664 PPP2R3BQ9Y5P8 575 aa26.65■■□□□ 1.86
MCF2L2-209ENST00000475664 MYH1P12882 1939 aa26.65■■□□□ 1.86
MCF2L2-209ENST00000475664 RPAP1Q9BWH6 1393 aaPredicted RBP26.64■■□□□ 1.86
MCF2L2-209ENST00000475664 ITGBL1O95965 494 aaPredicted RBP26.64■■□□□ 1.86
MCF2L2-209ENST00000475664 TCP10Q12799 353 aa26.64■■□□□ 1.86
MCF2L2-209ENST00000475664 PICALMQ13492 652 aa26.64■■□□□ 1.86
MCF2L2-209ENST00000475664 CCDC129Q6ZRS4 1044 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms