RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 ZFATQ9P243 1243 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 PCDHB14Q9Y5E9 798 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 KHNYNO15037 678 aaKnown RBP6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 RFPL3O75679 317 aa6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 ALDH1L1O75891 902 aa6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 ATE1O95260 518 aa6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 BPNT1O95861 308 aa6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 PSAPP07602 524 aa6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 SOX18P35713 384 aa6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 ZNF157P51786 506 aaPredicted RBP6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 PPP2R3AQ06190 1150 aa6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 SFSWAPQ12872 951 aaKnown RBP6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 MAP9Q49MG5 647 aa6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 MRM1Q6IN84 353 aaKnown RBP6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 TTC6Q86TZ1 520 aa6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 WDR75Q8IWA0 830 aaKnown RBP6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
SRGAP3-205ENST00000475560 CCDC163A0A0D9SF12 145 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 RHOQP17081 205 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 NME2P22392 152 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 SOX5P35711 763 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 FOXC1Q12948 553 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 PABPC4Q13310 644 aaKnown RBP eCLIP6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 LRRC14Q15048 493 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 ZC3H12BQ5HYM0 836 aaKnown RBP6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 SPRYD7Q5W111 196 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 CCSAPQ6IQ19 270 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 EEPD1Q7L9B9 569 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 ZBTB38Q8NAP3 1195 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 HHIPQ96QV1 700 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 SLC26A8Q96RN1 970 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 PCGF6Q9BYE7 350 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 PKD2L1Q9P0L9 805 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 MCM8Q9UJA3 840 aa6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 POLR3KQ9Y2Y1 108 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-205ENST00000475560 IRS4O14654 1257 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 TSPAN6O43657 245 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 HOXD8P13378 290 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 EPHB1P54762 984 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 PLAURQ03405 335 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 FAM50AQ14320 339 aaKnown RBP6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 LRRFIP1Q32MZ4 808 aaKnown RBP6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 CT47A1Q5JQC4 288 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 HGSNATQ68CP4 663 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 UBR7Q8N806 425 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 ZSCAN1Q8NBB4 408 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 ASAP3Q8TDY4 903 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 PNMA5Q96PV4 448 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 APBA2Q99767 749 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 TM9SF2Q99805 663 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 RUBCNLQ9H714 662 aa6.7□□□□□ -1.34
SRGAP3-205ENST00000475560 PDE2AO00408 941 aaPredicted RBP6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 ADCY3O60266 1144 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 PDE8AO60658 829 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 UPP2O95045 317 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 GUCY2CP25092 1073 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 GNALP38405 381 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 RPL6Q02878 288 aaKnown RBP6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 UBE4AQ14139 1066 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 CBX2Q14781 532 aaPredicted RBP6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 TTF1Q15361 905 aaPredicted RBP6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 AKAP4Q5JQC9 854 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 ZNF697Q5TEC3 545 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 RNF180Q86T96 592 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 TICAM2Q86XR7 235 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 GRIN3AQ8TCU5 1115 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 ANTXR1Q9H6X2 564 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 PDZRN3Q9UPQ7 1066 aa6.69□□□□□ -1.34
SRGAP3-205ENST00000475560 TTC24A2A3L6 582 aaPredicted RBP6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 UPK3BL1B0FP48 263 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 UPK3BL2E5RIL1 263 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 CAND2O75155 1236 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 MAP3K6O95382 1288 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 F11P03951 625 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 NFKB1P19838 968 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 ARNTP27540 789 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 LLGL2Q6P1M3 1020 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 ZNF598Q86UK7 904 aaKnown RBP6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 STK35Q8TDR2 534 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 MUC3BQ9H195 1237 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 EFCC1Q9HA90 598 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 GPAMQ9HCL2 828 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 MAPRE3Q9UPY8 281 aa6.68□□□□□ -1.34
SRGAP3-205ENST00000475560 EFSO43281 561 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 CREB3O43889 395 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 GRIN3BO60391 1043 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 PTPN11Q06124 597 aaPredicted RBP6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 NCAPHQ15003 741 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 PPP2R5AQ15172 486 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 AXDND1Q5T1B0 1012 aaPredicted RBP6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 TSHZ1Q6ZSZ6 1077 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 LRRC47Q8N1G4 583 aaKnown RBP6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 ATL2Q8NHH9 583 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 KIF2CQ99661 725 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 EMILIN2Q9BXX0 1053 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 PBX4Q9BYU1 374 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 SLC12A7Q9Y666 1083 aa6.67□□□□□ -1.34
SRGAP3-205ENST00000475560 IQCA1LA6NCM1 817 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms