RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 ZMYM1Q5SVZ6 1142 aa20.38■□□□□ 0.85
CCM2-207ENST00000475551 DHX16O60231 1041 aaKnown RBP20.38■□□□□ 0.85
CCM2-207ENST00000475551 GCP02774 474 aa20.38■□□□□ 0.85
CCM2-207ENST00000475551 OLFM4Q6UX06 510 aa20.38■□□□□ 0.85
CCM2-207ENST00000475551 C10orf67Q8IYJ2 551 aa20.38■□□□□ 0.85
CCM2-207ENST00000475551 INTS13Q9NVM9 706 aa20.38■□□□□ 0.85
CCM2-207ENST00000475551 FAM237AA0A1B0GTK4 181 aa20.37■□□□□ 0.85
CCM2-207ENST00000475551 TRIM66O15016 1216 aa20.37■□□□□ 0.85
CCM2-207ENST00000475551 CHST3Q7LGC8 479 aa20.37■□□□□ 0.85
CCM2-207ENST00000475551 DHX58Q96C10 678 aa20.37■□□□□ 0.85
CCM2-207ENST00000475551 SLIT3O75094 1523 aa20.37■□□□□ 0.85
CCM2-207ENST00000475551 IVLP07476 585 aa20.37■□□□□ 0.85
CCM2-207ENST00000475551 GYS2P54840 703 aa20.37■□□□□ 0.85
CCM2-207ENST00000475551 CTR9Q6PD62 1173 aa20.37■□□□□ 0.85
CCM2-207ENST00000475551 FANCLQ9NW38 375 aa20.37■□□□□ 0.85
CCM2-207ENST00000475551 RRP15Q9Y3B9 282 aaKnown RBP20.37■□□□□ 0.85
CCM2-207ENST00000475551 A0A0G2JLW4 131 aa20.36■□□□□ 0.85
CCM2-207ENST00000475551 KIF28PB7ZC32 967 aa20.36■□□□□ 0.85
CCM2-207ENST00000475551 NOP2P46087 812 aaKnown RBP20.36■□□□□ 0.85
CCM2-207ENST00000475551 KIF23Q02241 960 aaPredicted RBP20.36■□□□□ 0.85
CCM2-207ENST00000475551 ANKRD24Q8TF21 1146 aa20.36■□□□□ 0.85
CCM2-207ENST00000475551 LTN1O94822 1766 aa20.36■□□□□ 0.85
CCM2-207ENST00000475551 NFAT5O94916 1531 aa20.36■□□□□ 0.85
CCM2-207ENST00000475551 PPP6R2O75170 966 aa20.36■□□□□ 0.85
CCM2-207ENST00000475551 RABL6Q3YEC7 729 aaPredicted RBP20.36■□□□□ 0.85
CCM2-207ENST00000475551 C1orf141Q5JVX7 400 aa20.36■□□□□ 0.85
CCM2-207ENST00000475551 TOGARAM2Q6ZUX3 1019 aa20.36■□□□□ 0.85
CCM2-207ENST00000475551 TC2NQ8N9U0 490 aa20.36■□□□□ 0.85
CCM2-207ENST00000475551 RPS6KA5O75582 802 aa20.35■□□□□ 0.85
CCM2-207ENST00000475551 LEKR1Q6ZMV7 388 aa20.35■□□□□ 0.85
CCM2-207ENST00000475551 KCNH5Q8NCM2 988 aa20.35■□□□□ 0.85
CCM2-207ENST00000475551 METTL22Q9BUU2 404 aaPredicted RBP20.35■□□□□ 0.85
CCM2-207ENST00000475551 PHRF1Q9P1Y6 1649 aaKnown RBP20.35■□□□□ 0.85
CCM2-207ENST00000475551 POTEB2H3BUK9 544 aa20.35■□□□□ 0.85
CCM2-207ENST00000475551 USP5P45974 858 aa20.35■□□□□ 0.85
CCM2-207ENST00000475551 SRGAP1Q7Z6B7 1085 aa20.35■□□□□ 0.85
CCM2-207ENST00000475551 PAG1Q9NWQ8 432 aa20.35■□□□□ 0.85
CCM2-207ENST00000475551 PNOCQ13519 176 aa20.34■□□□□ 0.85
CCM2-207ENST00000475551 BEND6Q5SZJ8 279 aaPredicted RBP20.34■□□□□ 0.85
CCM2-207ENST00000475551 RAB21Q9UL25 225 aa20.34■□□□□ 0.85
CCM2-207ENST00000475551 MARCKSP29966 332 aaPredicted RBP20.34■□□□□ 0.85
CCM2-207ENST00000475551 ZC3H6P61129 1189 aaKnown RBP20.34■□□□□ 0.85
CCM2-207ENST00000475551 SPECC1LQ69YQ0 1117 aa20.34■□□□□ 0.85
CCM2-207ENST00000475551 HDXQ7Z353 690 aa20.34■□□□□ 0.85
CCM2-207ENST00000475551 JMYQ8N9B5 988 aa20.34■□□□□ 0.85
CCM2-207ENST00000475551 PLEKHG2Q9H7P9 1386 aa20.34■□□□□ 0.85
CCM2-207ENST00000475551 GOLIM4O00461 696 aa20.33■□□□□ 0.85
CCM2-207ENST00000475551 CHMP4BP1P59074 171 aa20.33■□□□□ 0.85
CCM2-207ENST00000475551 TUBB4BP68371 445 aa20.33■□□□□ 0.85
CCM2-207ENST00000475551 SHC4Q6S5L8 630 aa20.33■□□□□ 0.85
CCM2-207ENST00000475551 CCDC12Q8WUD4 166 aaPredicted RBP20.33■□□□□ 0.85
CCM2-207ENST00000475551 MYD88Q99836 296 aa20.33■□□□□ 0.85
CCM2-207ENST00000475551 HPS5Q9UPZ3 1129 aa20.33■□□□□ 0.85
CCM2-207ENST00000475551 CUTAO60888 179 aa20.33■□□□□ 0.84
CCM2-207ENST00000475551 PTPN21Q16825 1174 aa20.33■□□□□ 0.84
CCM2-207ENST00000475551 PDILTQ8N807 584 aa20.33■□□□□ 0.84
CCM2-207ENST00000475551 MAST3O60307 1309 aa20.32■□□□□ 0.84
CCM2-207ENST00000475551 ELOA2Q8IYF1 753 aaPredicted RBP20.32■□□□□ 0.84
CCM2-207ENST00000475551 CEP112Q8N8E3 955 aa20.32■□□□□ 0.84
CCM2-207ENST00000475551 MSANTD4Q8NCY6 345 aa20.32■□□□□ 0.84
CCM2-207ENST00000475551 ANKZF1Q9H8Y5 726 aa20.32■□□□□ 0.84
CCM2-207ENST00000475551 GPHNQ9NQX3 736 aaPredicted RBP20.32■□□□□ 0.84
CCM2-207ENST00000475551 EIF3JO75822 258 aaKnown RBP20.32■□□□□ 0.84
CCM2-207ENST00000475551 HSPA1LP34931 641 aa20.32■□□□□ 0.84
CCM2-207ENST00000475551 RESP18Q5W5W9 173 aa20.32■□□□□ 0.84
CCM2-207ENST00000475551 METTL16Q86W50 562 aaKnown RBP20.32■□□□□ 0.84
CCM2-207ENST00000475551 GOLGA6L1Q8N7Z2 621 aa20.32■□□□□ 0.84
CCM2-207ENST00000475551 PDE11AQ9HCR9 933 aa20.32■□□□□ 0.84
CCM2-207ENST00000475551 TUBB2AQ13885 445 aa20.31■□□□□ 0.84
CCM2-207ENST00000475551 NOM1Q5C9Z4 860 aaKnown RBP20.31■□□□□ 0.84
CCM2-207ENST00000475551 TUBB2BQ9BVA1 445 aa20.31■□□□□ 0.84
CCM2-207ENST00000475551 GJB4Q9NTQ9 266 aa20.31■□□□□ 0.84
CCM2-207ENST00000475551 VPS18Q9P253 973 aa20.31■□□□□ 0.84
CCM2-207ENST00000475551 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
CCM2-207ENST00000475551 ERLIN1O75477 346 aa20.31■□□□□ 0.84
CCM2-207ENST00000475551 ADKP55263 362 aaKnown RBP20.31■□□□□ 0.84
CCM2-207ENST00000475551 PTPAQ15257 358 aa20.31■□□□□ 0.84
CCM2-207ENST00000475551 ABCA3Q99758 1704 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 GOLGA8BA8MQT2 603 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 CPLX1O14810 134 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 RNF113AO15541 343 aaKnown RBP20.3■□□□□ 0.84
CCM2-207ENST00000475551 ZNF18P17022 549 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 CCDC102BQ68D86 513 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 FOXP4Q8IVH2 680 aaPredicted RBP20.3■□□□□ 0.84
CCM2-207ENST00000475551 L1RE1Q9UN81 338 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 PCDHA5Q9Y5H7 936 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 CCDC175P0C221 793 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 PDE4BQ07343 736 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 TTLL5Q6EMB2 1281 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 CDC23Q9UJX2 597 aa20.3■□□□□ 0.84
CCM2-207ENST00000475551 SIPA1L3O60292 1781 aaPredicted RBP20.3■□□□□ 0.84
CCM2-207ENST00000475551 KARSQ15046 597 aaKnown RBP20.29■□□□□ 0.84
CCM2-207ENST00000475551 ARHGEF25Q86VW2 580 aa20.29■□□□□ 0.84
CCM2-207ENST00000475551 MRPL44Q9H9J2 332 aaKnown RBP20.29■□□□□ 0.84
CCM2-207ENST00000475551 PRC1O43663 620 aa20.29■□□□□ 0.84
CCM2-207ENST00000475551 BMP6P22004 513 aa20.29■□□□□ 0.84
CCM2-207ENST00000475551 MCM6Q14566 821 aa20.29■□□□□ 0.84
CCM2-207ENST00000475551 COPS6Q7L5N1 327 aa20.29■□□□□ 0.84
CCM2-207ENST00000475551 CNNM3Q8NE01 707 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms