RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 MROH7-TTC4A0A0A0MT08 1334 aa21.44■■□□□ 1.02
HIF3A-207ENST00000475432 PPIP5K2O43314 1243 aa21.43■■□□□ 1.02
HIF3A-207ENST00000475432 CRNKL1Q9BZJ0 848 aaKnown RBP21.43■■□□□ 1.02
HIF3A-207ENST00000475432 FOXD4L1Q9NU39 408 aa21.43■■□□□ 1.02
HIF3A-207ENST00000475432 LIMCH1Q9UPQ0 1083 aa21.43■■□□□ 1.02
HIF3A-207ENST00000475432 TBC1D10CQ8IV04 446 aa21.43■■□□□ 1.02
HIF3A-207ENST00000475432 LARP6Q9BRS8 491 aaKnown RBP21.43■■□□□ 1.02
HIF3A-207ENST00000475432 DHX32Q7L7V1 743 aaKnown RBP21.42■■□□□ 1.02
HIF3A-207ENST00000475432 MXD3Q9BW11 206 aa21.42■■□□□ 1.02
HIF3A-207ENST00000475432 CHD4Q14839 1912 aa21.42■■□□□ 1.02
HIF3A-207ENST00000475432 BAG3O95817 575 aa21.41■■□□□ 1.02
HIF3A-207ENST00000475432 STRIP1Q5VSL9 837 aa21.41■■□□□ 1.02
HIF3A-207ENST00000475432 GIMAP6Q6P9H5 292 aa21.41■■□□□ 1.02
HIF3A-207ENST00000475432 SLF2Q8IX21 1173 aa21.41■■□□□ 1.02
HIF3A-207ENST00000475432 FAM163AQ96GL9 167 aaPredicted RBP21.41■■□□□ 1.02
HIF3A-207ENST00000475432 CCDC88AQ3V6T2 1871 aa21.41■■□□□ 1.02
HIF3A-207ENST00000475432 PPP4CP60510 307 aa21.41■■□□□ 1.02
HIF3A-207ENST00000475432 EXOSC10Q01780 885 aaKnown RBP21.41■■□□□ 1.02
HIF3A-207ENST00000475432 TOB2Q14106 344 aaPredicted RBP21.41■■□□□ 1.02
HIF3A-207ENST00000475432 ANKRD1Q15327 319 aa21.41■■□□□ 1.02
HIF3A-207ENST00000475432 NOL10Q9BSC4 688 aaKnown RBP21.41■■□□□ 1.02
HIF3A-207ENST00000475432 DDIT3P35638 169 aa21.4■■□□□ 1.02
HIF3A-207ENST00000475432 CUL4AQ13619 759 aa21.4■■□□□ 1.02
HIF3A-207ENST00000475432 NCOA7Q8NI08 942 aa21.4■■□□□ 1.02
HIF3A-207ENST00000475432 GPR75-ASB3A0A0A6YYF3 556 aa21.39■■□□□ 1.02
HIF3A-207ENST00000475432 ILDR2Q71H61 639 aa21.39■■□□□ 1.02
HIF3A-207ENST00000475432 ZNF277Q9NRM2 450 aaPredicted RBP21.39■■□□□ 1.02
HIF3A-207ENST00000475432 ATP8A2Q9NTI2 1148 aa21.39■■□□□ 1.02
HIF3A-207ENST00000475432 GAKO14976 1311 aa21.39■■□□□ 1.02
HIF3A-207ENST00000475432 USP17L3A6NCW0 530 aa21.39■■□□□ 1.01
HIF3A-207ENST00000475432 USP17L4A6NCW7 530 aa21.39■■□□□ 1.01
HIF3A-207ENST00000475432 F8W031 263 aaPredicted RBP21.39■■□□□ 1.01
HIF3A-207ENST00000475432 BTDP43251 543 aa21.39■■□□□ 1.01
HIF3A-207ENST00000475432 CTDSPL2Q05D32 466 aa21.39■■□□□ 1.01
HIF3A-207ENST00000475432 DACT2Q5SW24 774 aa21.39■■□□□ 1.01
HIF3A-207ENST00000475432 Q6ZUG5 572 aa21.39■■□□□ 1.01
HIF3A-207ENST00000475432 USP17L1Q7RTZ2 530 aa21.39■■□□□ 1.01
HIF3A-207ENST00000475432 RALYLQ86SE5 291 aaKnown RBP21.39■■□□□ 1.01
HIF3A-207ENST00000475432 CERS3Q8IU89 383 aa21.39■■□□□ 1.01
HIF3A-207ENST00000475432 MB21D2Q8IYB1 491 aaPredicted RBP21.39■■□□□ 1.01
HIF3A-207ENST00000475432 SH3RF3Q8TEJ3 882 aaPredicted RBP21.39■■□□□ 1.01
HIF3A-207ENST00000475432 SPON1Q9HCB6 807 aa21.39■■□□□ 1.01
HIF3A-207ENST00000475432 DCP1AQ9NPI6 582 aaPredicted RBP21.39■■□□□ 1.01
HIF3A-207ENST00000475432 TTF2Q9UNY4 1162 aaKnown RBP21.39■■□□□ 1.01
HIF3A-207ENST00000475432 FKBP1AP62942 108 aaKnown RBP21.38■■□□□ 1.01
HIF3A-207ENST00000475432 PPARAQ07869 468 aa21.38■■□□□ 1.01
HIF3A-207ENST00000475432 TRDNQ13061 729 aa21.38■■□□□ 1.01
HIF3A-207ENST00000475432 LRRC2Q9BYS8 371 aa21.38■■□□□ 1.01
HIF3A-207ENST00000475432 VPS33BQ9H267 617 aa21.38■■□□□ 1.01
HIF3A-207ENST00000475432 TPCN1Q9ULQ1 816 aa21.38■■□□□ 1.01
HIF3A-207ENST00000475432 ZSCAN31Q96LW9 406 aaPredicted RBP21.38■■□□□ 1.01
HIF3A-207ENST00000475432 YDJCA8MPS7 323 aa21.37■■□□□ 1.01
HIF3A-207ENST00000475432 LARGE1O95461 756 aa21.37■■□□□ 1.01
HIF3A-207ENST00000475432 CTR9Q6PD62 1173 aa21.37■■□□□ 1.01
HIF3A-207ENST00000475432 CHST3Q7LGC8 479 aa21.37■■□□□ 1.01
HIF3A-207ENST00000475432 LARGE2Q8N3Y3 721 aa21.37■■□□□ 1.01
HIF3A-207ENST00000475432 ANAPC4Q9UJX5 808 aa21.37■■□□□ 1.01
HIF3A-207ENST00000475432 DAGLAQ9Y4D2 1042 aa21.37■■□□□ 1.01
HIF3A-207ENST00000475432 MINDY4BA8MYZ0 360 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 MCM5P33992 734 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 FGD1P98174 961 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 AKNAD1Q5T1N1 836 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 NLGN2Q8NFZ4 835 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 STAG1Q8WVM7 1258 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 INTS4Q96HW7 963 aaKnown RBP21.36■■□□□ 1.01
HIF3A-207ENST00000475432 SH2B1Q9NRF2 756 aaPredicted RBP21.36■■□□□ 1.01
HIF3A-207ENST00000475432 BCS1LQ9Y276 419 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 TACC3Q9Y6A5 838 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 NEDD4P46934 1319 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 ME3Q16798 604 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 BRF1Q92994 677 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 AGXT2Q9BYV1 514 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 INCENPQ9NQS7 918 aa21.36■■□□□ 1.01
HIF3A-207ENST00000475432 MKRN1Q9UHC7 482 aaKnown RBP21.36■■□□□ 1.01
HIF3A-207ENST00000475432 LAMA4Q16363 1823 aa21.35■■□□□ 1.01
HIF3A-207ENST00000475432 USP17L12C9JPN9 530 aa21.35■■□□□ 1.01
HIF3A-207ENST00000475432 USP17L21D6R901 530 aa21.35■■□□□ 1.01
HIF3A-207ENST00000475432 PLCG2P16885 1265 aa21.35■■□□□ 1.01
HIF3A-207ENST00000475432 MFSD6Q6ZSS7 791 aa21.35■■□□□ 1.01
HIF3A-207ENST00000475432 CHMP5Q9NZZ3 219 aa21.35■■□□□ 1.01
HIF3A-207ENST00000475432 CYP2D7A0A087X1C5 515 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 PRC1O43663 620 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 USP5P45974 858 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 SCNN1DP51172 638 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 ANTXR2P58335 489 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 RHBDL3P58872 404 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 FBXL16Q8N461 479 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 NKX2-3Q8TAU0 364 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 TAOK3Q9H2K8 898 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 CNNM2Q9H8M5 875 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 BRCA1P38398 1863 aaKnown RBP21.34■■□□□ 1.01
HIF3A-207ENST00000475432 WDR19Q8NEZ3 1342 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 B4E1Z4 1266 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 SMIM22K7EJ46 135 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 HHIPL2Q6UWX4 724 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 KIAA0825Q8IV33 1275 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 TGFBRAP1Q8WUH2 860 aa21.34■■□□□ 1.01
HIF3A-207ENST00000475432 RNF41Q9H4P4 317 aaPredicted RBP21.34■■□□□ 1.01
HIF3A-207ENST00000475432 CWC22Q9HCG8 908 aaKnown RBP21.34■■□□□ 1.01
HIF3A-207ENST00000475432 ARPP21Q9UBL0 812 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms