RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 MATR3P43243 847 aaKnown RBP eCLIP6.46□□□□□ -1.37
CBWD1-212ENST00000475411 FOSBP53539 338 aa6.46□□□□□ -1.37
CBWD1-212ENST00000475411 CACNB1Q02641 598 aaPredicted RBP6.46□□□□□ -1.37
CBWD1-212ENST00000475411 SF3B3Q15393 1217 aaKnown RBP6.46□□□□□ -1.37
CBWD1-212ENST00000475411 SLC4A8Q2Y0W8 1093 aa6.46□□□□□ -1.37
CBWD1-212ENST00000475411 CFAP100Q494V2 611 aa6.46□□□□□ -1.37
CBWD1-212ENST00000475411 TBC1D10BQ4KMP7 808 aaPredicted RBP6.46□□□□□ -1.37
CBWD1-212ENST00000475411 GTF3C2Q8WUA4 911 aaPredicted RBP6.46□□□□□ -1.37
CBWD1-212ENST00000475411 SH2B1Q9NRF2 756 aaPredicted RBP6.46□□□□□ -1.37
CBWD1-212ENST00000475411 RBM28Q9NW13 759 aaKnown RBP6.46□□□□□ -1.37
CBWD1-212ENST00000475411 BRPF3Q9ULD4 1205 aa6.46□□□□□ -1.37
CBWD1-212ENST00000475411 CCDC171Q6TFL3 1326 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 CLRN2A0PK11 232 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 PCP11498 1178 aaKnown RBP6.46□□□□□ -1.38
CBWD1-212ENST00000475411 STIM1Q13586 685 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 KCTD2Q14681 263 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 HLFQ16534 295 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 MCTP2Q6DN12 878 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 CREBRFQ8IUR6 639 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 MAPKAPK5Q8IW41 473 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 AGBL3Q8NEM8 1001 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 COA7Q96BR5 231 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 DBNDD2Q9BQY9 259 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 LZTS2Q9BRK4 669 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 C6orf50Q9HD87 102 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 H7C1W4 665 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 PROSER3Q2NL68 480 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 CERKLQ49MI3 558 aaPredicted RBP6.46□□□□□ -1.38
CBWD1-212ENST00000475411 CCDC102BQ68D86 513 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 STXBP4Q6ZWJ1 553 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 DRC7Q8IY82 874 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 TGFBRAP1Q8WUH2 860 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 VAT1LQ9HCJ6 419 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 ADARB2Q9NS39 739 aaKnown RBP6.46□□□□□ -1.38
CBWD1-212ENST00000475411 KIF20AO95235 890 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 CALML3P27482 149 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 SLC1A4P43007 532 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 TIMM10P62072 90 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 STRIP1Q5VSL9 837 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 FOXP4Q8IVH2 680 aaPredicted RBP6.46□□□□□ -1.38
CBWD1-212ENST00000475411 PIBF1Q8WXW3 757 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 PAGR1Q9BTK6 254 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 NBPF3Q9H094 633 aa6.46□□□□□ -1.38
CBWD1-212ENST00000475411 NBPF7P0C2Y1 421 aaPredicted RBP6.45□□□□□ -1.38
CBWD1-212ENST00000475411 METAP2P50579 478 aaKnown RBP eCLIP6.45□□□□□ -1.38
CBWD1-212ENST00000475411 FASTKD5Q7L8L6 764 aaKnown RBP6.45□□□□□ -1.38
CBWD1-212ENST00000475411 MICALL2Q8IY33 904 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 CKAP2LQ8IYA6 745 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 TTLL11Q8NHH1 800 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 DCTPP1Q9H773 170 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 SEC31BQ9NQW1 1179 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 CCDC39Q9UFE4 941 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 SAMM50Q9Y512 469 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 LPXNO60711 386 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 FMNL1O95466 1100 aaPredicted RBP6.45□□□□□ -1.38
CBWD1-212ENST00000475411 ZNF853P0CG23 659 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 GNA11P29992 359 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 RTN1Q16799 776 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 ABCB5Q2M3G0 1257 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 HOMER1Q86YM7 354 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 ZNF34Q8IZ26 560 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 ATP8A2Q9NTI2 1148 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 CNOT7Q9UIV1 285 aaKnown RBP6.45□□□□□ -1.38
CBWD1-212ENST00000475411 SLIT2O94813 1529 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 M0QZ92 97 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 ZBTB43O43298 467 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 CASTP20810 708 aaKnown RBP6.45□□□□□ -1.38
CBWD1-212ENST00000475411 BCAMP50895 628 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 PDE1AP54750 535 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 KBTBD3Q8NAB2 608 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 NEK1Q96PY6 1258 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 LRRC27Q9C0I9 530 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 DEF6Q9H4E7 631 aa6.45□□□□□ -1.38
CBWD1-212ENST00000475411 DDX11L8A8MPP1 907 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 BMP15O95972 392 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 ALDH1A1P00352 501 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 ASNSP08243 561 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 DESP17661 470 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 HAND2P61296 217 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 ICA1Q05084 483 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 TTC22Q5TAA0 569 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 ZNF710Q8N1W2 664 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 PYM1Q9BRP8 204 aaKnown RBP6.44□□□□□ -1.38
CBWD1-212ENST00000475411 PI4KBQ9UBF8 816 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 PPP2R3BQ9Y5P8 575 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 ABCC4O15439 1325 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 KDM4AO75164 1064 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 SSBP05455 408 aaKnown RBP eCLIP6.44□□□□□ -1.38
CBWD1-212ENST00000475411 ATP5JP18859 108 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 EPHX2P34913 555 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 ZNF157P51786 506 aaPredicted RBP6.44□□□□□ -1.38
CBWD1-212ENST00000475411 UBXN2AP68543 259 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 BMS1Q14692 1282 aaKnown RBP6.44□□□□□ -1.38
CBWD1-212ENST00000475411 DPP9Q86TI2 863 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 MCF2L2Q86YR7 1114 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 NOC3LQ8WTT2 800 aaKnown RBP6.44□□□□□ -1.38
CBWD1-212ENST00000475411 TBC1D2Q9BYX2 928 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 CD209Q9NNX6 404 aa6.44□□□□□ -1.38
CBWD1-212ENST00000475411 IBSPP21815 317 aaPredicted RBP6.44□□□□□ -1.38
CBWD1-212ENST00000475411 SSR1P43307 286 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms