RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ZNF213O14771 459 aa12.33□□□□□ -0.44
COL12A1-206ENST00000474564 HSPD1P10809 573 aaKnown RBP12.33□□□□□ -0.44
COL12A1-206ENST00000474564 KRT32Q14532 448 aa12.33□□□□□ -0.44
COL12A1-206ENST00000474564 CCDC129Q6ZRS4 1044 aa12.33□□□□□ -0.44
COL12A1-206ENST00000474564 TEX11Q8IYF3 940 aa12.33□□□□□ -0.44
COL12A1-206ENST00000474564 MAP4K1Q92918 833 aa12.33□□□□□ -0.44
COL12A1-206ENST00000474564 MXD3Q9BW11 206 aa12.33□□□□□ -0.44
COL12A1-206ENST00000474564 ZNF287Q9HBT7 754 aa12.33□□□□□ -0.44
COL12A1-206ENST00000474564 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
COL12A1-206ENST00000474564 GAKO14976 1311 aa12.33□□□□□ -0.44
COL12A1-206ENST00000474564 PSMA5P28066 241 aa12.32□□□□□ -0.44
COL12A1-206ENST00000474564 TNNI2P48788 182 aa12.32□□□□□ -0.44
COL12A1-206ENST00000474564 GMPSP49915 693 aaPredicted RBP12.32□□□□□ -0.44
COL12A1-206ENST00000474564 ANAPC15P60006 121 aa12.32□□□□□ -0.44
COL12A1-206ENST00000474564 TRDNQ13061 729 aa12.32□□□□□ -0.44
COL12A1-206ENST00000474564 ALX1Q15699 326 aa12.32□□□□□ -0.44
COL12A1-206ENST00000474564 CFAP100Q494V2 611 aa12.32□□□□□ -0.44
COL12A1-206ENST00000474564 ZNF589Q86UQ0 364 aaPredicted RBP12.32□□□□□ -0.44
COL12A1-206ENST00000474564 LCORLQ8N3X6 602 aa12.32□□□□□ -0.44
COL12A1-206ENST00000474564 LSG1Q9H089 658 aaKnown RBP12.32□□□□□ -0.44
COL12A1-206ENST00000474564 CNOT7Q9UIV1 285 aaKnown RBP12.32□□□□□ -0.44
COL12A1-206ENST00000474564 ZBTB12Q9Y330 459 aaPredicted RBP12.32□□□□□ -0.44
COL12A1-206ENST00000474564 DAGLAQ9Y4D2 1042 aa12.32□□□□□ -0.44
COL12A1-206ENST00000474564 RBM8AQ9Y5S9 174 aaKnown RBP12.32□□□□□ -0.44
COL12A1-206ENST00000474564 CHD4Q14839 1912 aa12.32□□□□□ -0.44
COL12A1-206ENST00000474564 CCDC88AQ3V6T2 1871 aa12.31□□□□□ -0.44
COL12A1-206ENST00000474564 MYH7P12883 1935 aa12.31□□□□□ -0.44
COL12A1-206ENST00000474564 SEC24BO95487 1268 aa12.31□□□□□ -0.44
COL12A1-206ENST00000474564 POLR3DP05423 398 aaPredicted RBP12.31□□□□□ -0.44
COL12A1-206ENST00000474564 DYNLL1P63167 89 aaKnown RBP12.31□□□□□ -0.44
COL12A1-206ENST00000474564 TNFAIP1Q13829 316 aa12.31□□□□□ -0.44
COL12A1-206ENST00000474564 IFNL3Q8IZI9 196 aa12.31□□□□□ -0.44
COL12A1-206ENST00000474564 GMLQ99445 158 aa12.31□□□□□ -0.44
COL12A1-206ENST00000474564 RIOK1Q9BRS2 568 aaKnown RBP12.31□□□□□ -0.44
COL12A1-206ENST00000474564 TRIM34Q9BYJ4 488 aa12.31□□□□□ -0.44
COL12A1-206ENST00000474564 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
COL12A1-206ENST00000474564 MYOZ2Q9NPC6 264 aa12.31□□□□□ -0.44
COL12A1-206ENST00000474564 IQCA1LA6NCM1 817 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 HMGB1P09429 215 aaKnown RBP12.3□□□□□ -0.44
COL12A1-206ENST00000474564 HSPA4P34932 840 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 PTH1RQ03431 593 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 GRIK5Q16478 980 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 SLFNL1Q499Z3 407 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 TTC6Q86TZ1 520 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 MICALL2Q8IY33 904 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 MTMR14Q8NCE2 650 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 SH3RF3Q8TEJ3 882 aaPredicted RBP12.3□□□□□ -0.44
COL12A1-206ENST00000474564 TGFBRAP1Q8WUH2 860 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 MCM9Q9NXL9 1143 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 ARPP21Q9UBL0 812 aaPredicted RBP12.3□□□□□ -0.44
COL12A1-206ENST00000474564 ZMYM6O95789 1325 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 DOCK2Q92608 1830 aa12.3□□□□□ -0.44
COL12A1-206ENST00000474564 MAST2Q6P0Q8 1798 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 GSG1L2A8MUP6 293 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 MINDY4BA8MYZ0 360 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 FGAP02671 866 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 HLA-DOAP06340 250 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 PCP11498 1178 aaKnown RBP12.29□□□□□ -0.44
COL12A1-206ENST00000474564 RBM25P49756 843 aaKnown RBP12.29□□□□□ -0.44
COL12A1-206ENST00000474564 NT5C2P49902 561 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 ZNF280AP59817 542 aaPredicted RBP12.29□□□□□ -0.44
COL12A1-206ENST00000474564 RBM26Q5T8P6 1007 aaKnown RBP12.29□□□□□ -0.44
COL12A1-206ENST00000474564 CREB3L3Q68CJ9 461 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 RALYLQ86SE5 291 aaKnown RBP12.29□□□□□ -0.44
COL12A1-206ENST00000474564 ADGRA1Q86SQ6 560 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 ZSCAN29Q8IWY8 852 aaPredicted RBP12.29□□□□□ -0.44
COL12A1-206ENST00000474564 TBC1D32Q96NH3 1257 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 DHX36Q9H2U1 1008 aaKnown RBP12.29□□□□□ -0.44
COL12A1-206ENST00000474564 CNNM2Q9H8M5 875 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 GPRC5DQ9NZD1 345 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 TAOK2Q9UL54 1235 aa12.29□□□□□ -0.44
COL12A1-206ENST00000474564 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 NPM3O75607 178 aaKnown RBP12.28□□□□□ -0.44
COL12A1-206ENST00000474564 CHGBP05060 677 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 PDE4BQ07343 736 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 NECTIN1Q15223 517 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 FKBP1CQ5VVH2 108 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 APOBEC3HQ6NTF7 200 aaKnown RBP12.28□□□□□ -0.44
COL12A1-206ENST00000474564 CDC42EP5Q6NZY7 148 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 MFSD6Q6ZSS7 791 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 ZNF384Q8TF68 577 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 SDR42E1Q8WUS8 393 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 HOOK2Q96ED9 719 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 TDRD3Q9H7E2 651 aaKnown RBP12.28□□□□□ -0.44
COL12A1-206ENST00000474564 HACL1Q9UJ83 578 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 ZNF541Q9H0D2 1346 aa12.28□□□□□ -0.44
COL12A1-206ENST00000474564 GLTPD2A6NH11 291 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 SLC27A2O14975 620 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 PRKAB2O43741 272 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 ST18O60284 1047 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 ENTPD3O75355 529 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 DDNO94850 711 aaPredicted RBP12.27□□□□□ -0.45
COL12A1-206ENST00000474564 PRELPP51888 382 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 FGD1P98174 961 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 PICALMQ13492 652 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 BECN1Q14457 450 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 RABEP1Q15276 862 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 KIF4BQ2VIQ3 1234 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms