RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
TMEM50B-208ENST00000474272 ITPKAP23677 461 aa7.12□□□□□ -1.27
TMEM50B-208ENST00000474272 FAAP100Q0VG06 881 aa7.12□□□□□ -1.27
TMEM50B-208ENST00000474272 OGFOD2Q6N063 350 aa7.12□□□□□ -1.27
TMEM50B-208ENST00000474272 DDX54Q8TDD1 881 aaKnown RBP7.12□□□□□ -1.27
TMEM50B-208ENST00000474272 TMC1Q8TDI8 760 aa7.12□□□□□ -1.27
TMEM50B-208ENST00000474272 CCDC74AQ96AQ1 378 aa7.12□□□□□ -1.27
TMEM50B-208ENST00000474272 GSX1Q9H4S2 264 aaPredicted RBP7.12□□□□□ -1.27
TMEM50B-208ENST00000474272 CCDC86Q9H6F5 360 aaKnown RBP7.12□□□□□ -1.27
TMEM50B-208ENST00000474272 ABCB6Q9NP58 842 aa7.12□□□□□ -1.27
TMEM50B-208ENST00000474272 EIF1AYO14602 144 aaKnown RBP7.11□□□□□ -1.27
TMEM50B-208ENST00000474272 NDUFB5O43674 189 aa7.11□□□□□ -1.27
TMEM50B-208ENST00000474272 GADD45BO75293 160 aaPredicted RBP7.11□□□□□ -1.27
TMEM50B-208ENST00000474272 BNIP3Q12983 259 aa7.11□□□□□ -1.27
TMEM50B-208ENST00000474272 CDK5R2Q13319 367 aa7.11□□□□□ -1.27
TMEM50B-208ENST00000474272 OGFOD3Q6PK18 319 aa7.11□□□□□ -1.27
TMEM50B-208ENST00000474272 SPRED2Q7Z698 418 aa7.11□□□□□ -1.27
TMEM50B-208ENST00000474272 EPS8L3Q8TE67 593 aaKnown RBP7.11□□□□□ -1.27
TMEM50B-208ENST00000474272 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
TMEM50B-208ENST00000474272 GPR182O15218 404 aa7.1□□□□□ -1.27
TMEM50B-208ENST00000474272 CYP27A1Q02318 531 aa7.1□□□□□ -1.27
TMEM50B-208ENST00000474272 HP1BP3Q5SSJ5 553 aaPredicted RBP7.1□□□□□ -1.27
TMEM50B-208ENST00000474272 FAM181AQ8N9Y4 354 aa7.1□□□□□ -1.27
TMEM50B-208ENST00000474272 FAM129BQ96TA1 746 aa7.1□□□□□ -1.27
TMEM50B-208ENST00000474272 ZFYVE1Q9HBF4 777 aa7.1□□□□□ -1.27
TMEM50B-208ENST00000474272 TMPRSS2O15393 492 aa7.09□□□□□ -1.27
TMEM50B-208ENST00000474272 ZNF862O60290 1169 aa7.09□□□□□ -1.27
TMEM50B-208ENST00000474272 NEFLP07196 543 aa7.09□□□□□ -1.27
TMEM50B-208ENST00000474272 BCL7CQ8WUZ0 217 aaPredicted RBP7.09□□□□□ -1.27
TMEM50B-208ENST00000474272 U3KQE9 123 aa7.09□□□□□ -1.27
TMEM50B-208ENST00000474272 IGHA2P01877 340 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 FAM87AP0C7U9 286 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 CD96P40200 585 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 AP3B2Q13367 1082 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 PDE3BQ13370 1112 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 FZD5Q13467 585 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 GRM2Q14416 872 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 PI16Q6UXB8 463 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 WFDC3Q8IUB2 231 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 PLD6Q8N2A8 252 aaKnown RBP7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 GLIS3Q8NEA6 775 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 CRIM1Q9NZV1 1036 aa7.08□□□□□ -1.28
TMEM50B-208ENST00000474272 ITGB5P18084 799 aa7.07□□□□□ -1.28
TMEM50B-208ENST00000474272 PLCL1Q15111 1095 aa7.07□□□□□ -1.28
TMEM50B-208ENST00000474272 AGBL5Q8NDL9 886 aa7.07□□□□□ -1.28
TMEM50B-208ENST00000474272 ASIC4Q96FT7 647 aa7.07□□□□□ -1.28
TMEM50B-208ENST00000474272 FANCD2OSQ96PS1 177 aa7.07□□□□□ -1.28
TMEM50B-208ENST00000474272 PIDD1Q9HB75 910 aa7.07□□□□□ -1.28
TMEM50B-208ENST00000474272 DISC1Q9NRI5 854 aa7.07□□□□□ -1.28
TMEM50B-208ENST00000474272 SLC5A6Q9Y289 635 aa7.07□□□□□ -1.28
TMEM50B-208ENST00000474272 RNGTTO60942 597 aaKnown RBP7.06□□□□□ -1.28
TMEM50B-208ENST00000474272 LEFTY1O75610 366 aa7.06□□□□□ -1.28
TMEM50B-208ENST00000474272 HCLS1P14317 486 aaPredicted RBP7.06□□□□□ -1.28
TMEM50B-208ENST00000474272 PTPN12Q05209 780 aaKnown RBP7.06□□□□□ -1.28
TMEM50B-208ENST00000474272 STK35Q8TDR2 534 aa7.06□□□□□ -1.28
TMEM50B-208ENST00000474272 USTQ9Y2C2 406 aa7.06□□□□□ -1.28
TMEM50B-208ENST00000474272 SUPT5HO00267 1087 aaKnown RBP7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 GSTP1P09211 210 aaKnown RBP7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 SLFN14P0C7P3 912 aa7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 FCGRTP55899 365 aa7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 ID3Q02535 119 aa7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 TTLL4Q14679 1199 aa7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 ZNF792Q3KQV3 632 aa7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 CYP27C1Q4G0S4 372 aa7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 B4GALNT3Q6L9W6 998 aa7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 PRPF40BQ6NWY9 871 aaKnown RBP7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 SMYD4Q8IYR2 804 aaPredicted RBP7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 KCNB2Q92953 911 aa7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 CSRNP1Q96S65 589 aa7.05□□□□□ -1.28
TMEM50B-208ENST00000474272 PAPLNO95428 1278 aa7.04□□□□□ -1.28
TMEM50B-208ENST00000474272 C8AP07357 584 aa7.04□□□□□ -1.28
TMEM50B-208ENST00000474272 RPS26P11Q5JNZ5 115 aaPredicted RBP7.04□□□□□ -1.28
TMEM50B-208ENST00000474272 DTHD1Q6ZMT9 781 aa7.04□□□□□ -1.28
TMEM50B-208ENST00000474272 TXNDC2Q86VQ3 553 aa7.04□□□□□ -1.28
TMEM50B-208ENST00000474272 ARID3AQ99856 593 aa7.04□□□□□ -1.28
TMEM50B-208ENST00000474272 DNAJC25Q9H1X3 360 aa7.04□□□□□ -1.28
TMEM50B-208ENST00000474272 GPN3Q9UHW5 284 aaPredicted RBP7.04□□□□□ -1.28
TMEM50B-208ENST00000474272 ARID1BQ8NFD5 2236 aaPredicted RBP7.03□□□□□ -1.28
TMEM50B-208ENST00000474272 CD8BP10966 210 aa7.03□□□□□ -1.28
TMEM50B-208ENST00000474272 JUNBP17275 347 aaPredicted RBP7.03□□□□□ -1.28
TMEM50B-208ENST00000474272 CITED4Q96RK1 184 aa7.03□□□□□ -1.28
TMEM50B-208ENST00000474272 ATXN3LQ9H3M9 355 aa7.03□□□□□ -1.28
TMEM50B-208ENST00000474272 TRAK1Q9UPV9 953 aa7.03□□□□□ -1.28
TMEM50B-208ENST00000474272 PCDHGC5Q9Y5F6 944 aa7.03□□□□□ -1.28
TMEM50B-208ENST00000474272 SYNGAP1Q96PV0 1343 aa7.02□□□□□ -1.28
TMEM50B-208ENST00000474272 KIF4BQ2VIQ3 1234 aa7.02□□□□□ -1.29
TMEM50B-208ENST00000474272 ZNF648Q5T619 568 aaPredicted RBP7.02□□□□□ -1.29
TMEM50B-208ENST00000474272 MPRIPQ6WCQ1 1025 aa7.02□□□□□ -1.29
TMEM50B-208ENST00000474272 PDZD3Q86UT5 571 aa7.02□□□□□ -1.29
TMEM50B-208ENST00000474272 NETO1Q8TDF5 533 aa7.02□□□□□ -1.29
TMEM50B-208ENST00000474272 ADAMTS6Q9UKP5 1117 aa7.02□□□□□ -1.29
TMEM50B-208ENST00000474272 CARMIL2Q6F5E8 1435 aa7.01□□□□□ -1.29
TMEM50B-208ENST00000474272 NEFMP07197 916 aa7.01□□□□□ -1.29
TMEM50B-208ENST00000474272 POU5F2Q8N7G0 328 aa7.01□□□□□ -1.29
TMEM50B-208ENST00000474272 TMEM39AQ9NV64 488 aa7.01□□□□□ -1.29
TMEM50B-208ENST00000474272 AKAP2Q9Y2D5 859 aa7.01□□□□□ -1.29
TMEM50B-208ENST00000474272 JAG1P78504 1218 aa7□□□□□ -1.29
TMEM50B-208ENST00000474272 STK11IPQ8N1F8 1099 aa7□□□□□ -1.29
TMEM50B-208ENST00000474272 ISL2Q96A47 359 aa7□□□□□ -1.29
TMEM50B-208ENST00000474272 DUSP23Q9BVJ7 150 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms