RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 MMP14P50281 582 aa12.56□□□□□ -0.4
CASC3-204ENST00000474190 MAP3K12Q12852 859 aa12.56□□□□□ -0.4
CASC3-204ENST00000474190 KIF4BQ2VIQ3 1234 aa12.56□□□□□ -0.4
CASC3-204ENST00000474190 CDC42EP5Q6NZY7 148 aa12.56□□□□□ -0.4
CASC3-204ENST00000474190 DLK2Q6UY11 383 aa12.56□□□□□ -0.4
CASC3-204ENST00000474190 DDX4Q9NQI0 724 aaKnown RBP12.56□□□□□ -0.4
CASC3-204ENST00000474190 CHMLP26374 656 aa12.55□□□□□ -0.4
CASC3-204ENST00000474190 BTDP43251 543 aa12.55□□□□□ -0.4
CASC3-204ENST00000474190 NFIAQ12857 509 aa12.55□□□□□ -0.4
CASC3-204ENST00000474190 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
CASC3-204ENST00000474190 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
CASC3-204ENST00000474190 ZNF589Q86UQ0 364 aaPredicted RBP12.55□□□□□ -0.4
CASC3-204ENST00000474190 TICAM2Q86XR7 235 aa12.55□□□□□ -0.4
CASC3-204ENST00000474190 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
CASC3-204ENST00000474190 LCORLQ8N3X6 602 aa12.55□□□□□ -0.4
CASC3-204ENST00000474190 MIGA1Q8NAN2 632 aa12.55□□□□□ -0.4
CASC3-204ENST00000474190 TEKT1Q969V4 418 aa12.55□□□□□ -0.4
CASC3-204ENST00000474190 TDRD3Q9H7E2 651 aaKnown RBP12.55□□□□□ -0.4
CASC3-204ENST00000474190 SCAF8Q9UPN6 1271 aaKnown RBP12.55□□□□□ -0.4
CASC3-204ENST00000474190 MAST3O60307 1309 aa12.55□□□□□ -0.4
CASC3-204ENST00000474190 CNTNAP1P78357 1384 aa12.55□□□□□ -0.4
CASC3-204ENST00000474190 H7C1D1 291 aa12.54□□□□□ -0.4
CASC3-204ENST00000474190 PRKAB2O43741 272 aa12.54□□□□□ -0.4
CASC3-204ENST00000474190 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
CASC3-204ENST00000474190 CACNB3P54284 484 aa12.54□□□□□ -0.4
CASC3-204ENST00000474190 NMIQ13287 307 aaPredicted RBP12.54□□□□□ -0.4
CASC3-204ENST00000474190 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
CASC3-204ENST00000474190 TMED8Q6PL24 325 aaPredicted RBP12.54□□□□□ -0.4
CASC3-204ENST00000474190 USP50Q70EL3 339 aaPredicted RBP12.54□□□□□ -0.4
CASC3-204ENST00000474190 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
CASC3-204ENST00000474190 ZFPM1Q8IX07 1006 aa12.54□□□□□ -0.4
CASC3-204ENST00000474190 CNTROBQ8N137 903 aa12.54□□□□□ -0.4
CASC3-204ENST00000474190 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
CASC3-204ENST00000474190 RILPL2Q969X0 211 aa12.54□□□□□ -0.4
CASC3-204ENST00000474190 FSD1Q9BTV5 496 aa12.54□□□□□ -0.4
CASC3-204ENST00000474190 ZNF70Q9UC06 446 aaPredicted RBP12.54□□□□□ -0.4
CASC3-204ENST00000474190 FAM198AQ9UFP1 575 aa12.54□□□□□ -0.4
CASC3-204ENST00000474190 MYO5AQ9Y4I1 1855 aaKnown RBP12.54□□□□□ -0.4
CASC3-204ENST00000474190 IQCA1LA6NCM1 817 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 SMIM22K7EJ46 135 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 EVX2Q03828 476 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 DLGAP5Q15398 846 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 CCDC129Q6ZRS4 1044 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 OGFOD1Q8N543 542 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 APPBP2Q92624 585 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 STRBPQ96SI9 672 aaKnown RBP12.53□□□□□ -0.4
CASC3-204ENST00000474190 IDI2Q9BXS1 227 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 ARMT1Q9H993 441 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 AATFQ9NY61 560 aaKnown RBP eCLIP12.53□□□□□ -0.4
CASC3-204ENST00000474190 HDAC9Q9UKV0 1011 aa12.53□□□□□ -0.4
CASC3-204ENST00000474190 CLRN2A0PK11 232 aa12.52□□□□□ -0.41
CASC3-204ENST00000474190 ZFYP08048 801 aaPredicted RBP12.52□□□□□ -0.41
CASC3-204ENST00000474190 LMOD1P29536 600 aaPredicted RBP12.52□□□□□ -0.41
CASC3-204ENST00000474190 GSTO1P78417 241 aa12.52□□□□□ -0.41
CASC3-204ENST00000474190 FMR1Q06787 632 aaKnown RBP eCLIP12.52□□□□□ -0.41
CASC3-204ENST00000474190 VPS53Q5VIR6 699 aa12.52□□□□□ -0.41
CASC3-204ENST00000474190 ANGEL2Q5VTE6 544 aaKnown RBP12.52□□□□□ -0.41
CASC3-204ENST00000474190 TEPSINQ96N21 525 aa12.52□□□□□ -0.41
CASC3-204ENST00000474190 EPB41L4AQ9HCS5 686 aaPredicted RBP12.52□□□□□ -0.41
CASC3-204ENST00000474190 GGA3Q9NZ52 723 aa12.52□□□□□ -0.41
CASC3-204ENST00000474190 ATRNL1Q5VV63 1379 aa12.52□□□□□ -0.41
CASC3-204ENST00000474190 RPAP1Q9BWH6 1393 aaPredicted RBP12.52□□□□□ -0.41
CASC3-204ENST00000474190 GSG1L2A8MUP6 293 aa12.51□□□□□ -0.41
CASC3-204ENST00000474190 GPAA1O43292 621 aa12.51□□□□□ -0.41
CASC3-204ENST00000474190 MBD4O95243 580 aa12.51□□□□□ -0.41
CASC3-204ENST00000474190 LDHCP07864 332 aa12.51□□□□□ -0.41
CASC3-204ENST00000474190 SLURP2P0DP57 97 aa12.51□□□□□ -0.41
CASC3-204ENST00000474190 SMC1BQ8NDV3 1235 aa12.51□□□□□ -0.41
CASC3-204ENST00000474190 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
CASC3-204ENST00000474190 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.51□□□□□ -0.414e-7■■□□□ 14
CASC3-204ENST00000474190 USP40Q9NVE5 1235 aa12.51□□□□□ -0.41
CASC3-204ENST00000474190 MAST2Q6P0Q8 1798 aa12.51□□□□□ -0.41
CASC3-204ENST00000474190 MAGEB6P1A0A0J9YX57 407 aa12.5□□□□□ -0.41
CASC3-204ENST00000474190 SGSM2O43147 1006 aa12.5□□□□□ -0.41
CASC3-204ENST00000474190 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
CASC3-204ENST00000474190 ITGBL1O95965 494 aaPredicted RBP12.5□□□□□ -0.41
CASC3-204ENST00000474190 RBM5P52756 815 aaKnown RBP eCLIP12.5□□□□□ -0.41
CASC3-204ENST00000474190 FKBP1CQ5VVH2 108 aa12.5□□□□□ -0.41
CASC3-204ENST00000474190 PNMA8AQ86V59 439 aaPredicted RBP12.5□□□□□ -0.41
CASC3-204ENST00000474190 HELLSQ9NRZ9 838 aa12.5□□□□□ -0.41
CASC3-204ENST00000474190 TACC3Q9Y6A5 838 aa12.5□□□□□ -0.41
CASC3-204ENST00000474190 PITPNM2Q9BZ72 1349 aa12.5□□□□□ -0.41
CASC3-204ENST00000474190 SSC5DA1L4H1 1573 aa12.5□□□□□ -0.41
CASC3-204ENST00000474190 SCN4AP35499 1836 aa12.5□□□□□ -0.41
CASC3-204ENST00000474190 MYH13Q9UKX3 1938 aa12.49□□□□□ -0.41
CASC3-204ENST00000474190 FLT1P17948 1338 aa12.49□□□□□ -0.41
CASC3-204ENST00000474190 ADM5C9JUS6 153 aa12.49□□□□□ -0.41
CASC3-204ENST00000474190 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
CASC3-204ENST00000474190 EAPPQ56P03 285 aaPredicted RBP12.49□□□□□ -0.41
CASC3-204ENST00000474190 PRAMEF18Q5VWM3 479 aa12.49□□□□□ -0.41
CASC3-204ENST00000474190 MAP1SQ66K74 1059 aaPredicted RBP12.49□□□□□ -0.41
CASC3-204ENST00000474190 ZSCAN25Q6NSZ9 544 aa12.49□□□□□ -0.41
CASC3-204ENST00000474190 CWC27Q6UX04 472 aaKnown RBP12.49□□□□□ -0.41
CASC3-204ENST00000474190 LDHDQ86WU2 507 aa12.49□□□□□ -0.41
CASC3-204ENST00000474190 SLF2Q8IX21 1173 aa12.49□□□□□ -0.41
CASC3-204ENST00000474190 SDR42E1Q8WUS8 393 aa12.49□□□□□ -0.41
CASC3-204ENST00000474190 DCP1AQ9NPI6 582 aaPredicted RBP12.49□□□□□ -0.41
CASC3-204ENST00000474190 DDTLA6NHG4 134 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms