RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 GINM1Q9NU53 330 aa9.68□□□□□ -0.86
SEC22A-204ENST00000473494 EFR3BQ9Y2G0 817 aa9.68□□□□□ -0.86
SEC22A-204ENST00000473494 REC114Q7Z4M0 266 aa9.67□□□□□ -0.86
SEC22A-204ENST00000473494 DTWD1Q8N5C7 304 aa9.67□□□□□ -0.86
SEC22A-204ENST00000473494 DHX38Q92620 1227 aaKnown RBP9.67□□□□□ -0.86
SEC22A-204ENST00000473494 NKD1Q969G9 470 aa9.67□□□□□ -0.86
SEC22A-204ENST00000473494 POU4F3Q15319 338 aa9.66□□□□□ -0.86
SEC22A-204ENST00000473494 ZNF385CQ66K41 422 aaPredicted RBP9.66□□□□□ -0.86
SEC22A-204ENST00000473494 GALNT11Q8NCW6 608 aa9.66□□□□□ -0.86
SEC22A-204ENST00000473494 FBXO27Q8NI29 283 aa9.66□□□□□ -0.86
SEC22A-204ENST00000473494 KLHDC7BQ96G42 594 aa9.66□□□□□ -0.86
SEC22A-204ENST00000473494 CORO1BQ9BR76 489 aa9.66□□□□□ -0.86
SEC22A-204ENST00000473494 ECEL1O95672 775 aa9.65□□□□□ -0.86
SEC22A-204ENST00000473494 CTSBP07858 339 aa9.65□□□□□ -0.86
SEC22A-204ENST00000473494 SELPP16109 830 aa9.65□□□□□ -0.86
SEC22A-204ENST00000473494 GTF2F1P35269 517 aaKnown RBP eCLIP9.65□□□□□ -0.86
SEC22A-204ENST00000473494 RPL6Q02878 288 aaKnown RBP9.65□□□□□ -0.86
SEC22A-204ENST00000473494 PTPN11Q06124 597 aaPredicted RBP9.65□□□□□ -0.86
SEC22A-204ENST00000473494 SUZ12Q15022 739 aaKnown RBP9.65□□□□□ -0.86
SEC22A-204ENST00000473494 CWF19L2Q2TBE0 894 aaKnown RBP9.65□□□□□ -0.86
SEC22A-204ENST00000473494 MAP1SQ66K74 1059 aaPredicted RBP9.65□□□□□ -0.86
SEC22A-204ENST00000473494 DIEXFQ68CQ4 756 aaKnown RBP9.65□□□□□ -0.86
SEC22A-204ENST00000473494 DCAF11Q8TEB1 546 aa9.65□□□□□ -0.86
SEC22A-204ENST00000473494 ADAM11O75078 769 aa9.64□□□□□ -0.87
SEC22A-204ENST00000473494 DEAF1O75398 565 aaPredicted RBP9.64□□□□□ -0.87
SEC22A-204ENST00000473494 BPNT1O95861 308 aa9.64□□□□□ -0.87
SEC22A-204ENST00000473494 MAOBP27338 520 aa9.64□□□□□ -0.87
SEC22A-204ENST00000473494 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.87
SEC22A-204ENST00000473494 FOXD4L6Q3SYB3 417 aaPredicted RBP9.64□□□□□ -0.87
SEC22A-204ENST00000473494 SEZ6Q53EL9 994 aa9.64□□□□□ -0.87
SEC22A-204ENST00000473494 LCE2AQ5TA79 106 aaPredicted RBP9.64□□□□□ -0.87
SEC22A-204ENST00000473494 FOXD4L3Q6VB84 417 aaPredicted RBP9.64□□□□□ -0.87
SEC22A-204ENST00000473494 MPRIPQ6WCQ1 1025 aa9.64□□□□□ -0.87
SEC22A-204ENST00000473494 GPBAR1Q8TDU6 330 aa9.64□□□□□ -0.87
SEC22A-204ENST00000473494 DNAJC2Q99543 621 aaKnown RBP9.64□□□□□ -0.87
SEC22A-204ENST00000473494 LOC100289279A0A1B0GTE1 492 aa9.63□□□□□ -0.87
SEC22A-204ENST00000473494 LOC105371045A0A1W2PR82 267 aa9.63□□□□□ -0.87
SEC22A-204ENST00000473494 TLR3O15455 904 aaKnown RBP9.63□□□□□ -0.87
SEC22A-204ENST00000473494 RBL2Q08999 1139 aa9.63□□□□□ -0.87
SEC22A-204ENST00000473494 DMRTC2Q8IXT2 367 aaPredicted RBP9.63□□□□□ -0.87
SEC22A-204ENST00000473494 JARID2Q92833 1246 aaPredicted RBP9.63□□□□□ -0.87
SEC22A-204ENST00000473494 KCNB2Q92953 911 aa9.63□□□□□ -0.87
SEC22A-204ENST00000473494 HIRIP3Q9BW71 556 aaPredicted RBP9.63□□□□□ -0.87
SEC22A-204ENST00000473494 CCDC86Q9H6F5 360 aaKnown RBP9.63□□□□□ -0.87
SEC22A-204ENST00000473494 STK10O94804 968 aaKnown RBP9.62□□□□□ -0.87
SEC22A-204ENST00000473494 SSBP05455 408 aaKnown RBP eCLIP9.62□□□□□ -0.87
SEC22A-204ENST00000473494 HP1BP3Q5SSJ5 553 aaPredicted RBP9.62□□□□□ -0.87
SEC22A-204ENST00000473494 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.62□□□□□ -0.87
SEC22A-204ENST00000473494 REXO1Q8N1G1 1221 aaKnown RBP9.62□□□□□ -0.87
SEC22A-204ENST00000473494 ZNF775Q96BV0 537 aaPredicted RBP9.62□□□□□ -0.87
SEC22A-204ENST00000473494 USP26Q9BXU7 913 aa9.62□□□□□ -0.87
SEC22A-204ENST00000473494 CD68P34810 354 aaPredicted RBP9.61□□□□□ -0.87
SEC22A-204ENST00000473494 NLRP12P59046 1061 aa9.61□□□□□ -0.87
SEC22A-204ENST00000473494 KIF4BQ2VIQ3 1234 aa9.61□□□□□ -0.87
SEC22A-204ENST00000473494 TREML4Q6UXN2 200 aa9.61□□□□□ -0.87
SEC22A-204ENST00000473494 SVOPQ8N4V2 548 aa9.61□□□□□ -0.87
SEC22A-204ENST00000473494 TRIM11Q96F44 468 aa9.61□□□□□ -0.87
SEC22A-204ENST00000473494 ACSBG1Q96GR2 724 aa9.61□□□□□ -0.87
SEC22A-204ENST00000473494 SRRTQ9BXP5 876 aaKnown RBP9.61□□□□□ -0.87
SEC22A-204ENST00000473494 ZNF408Q9H9D4 720 aa9.61□□□□□ -0.87
SEC22A-204ENST00000473494 ZNRF3Q9ULT6 936 aa9.61□□□□□ -0.87
SEC22A-204ENST00000473494 ZNF862O60290 1169 aa9.6□□□□□ -0.87
SEC22A-204ENST00000473494 ZNF165P49910 485 aa9.6□□□□□ -0.87
SEC22A-204ENST00000473494 FMR1NBQ8N0W7 255 aaPredicted RBP9.6□□□□□ -0.87
SEC22A-204ENST00000473494 ZC3H12CQ9C0D7 883 aaKnown RBP9.6□□□□□ -0.87
SEC22A-204ENST00000473494 BRMS1Q9HCU9 246 aa9.6□□□□□ -0.87
SEC22A-204ENST00000473494 ENAMQ9NRM1 1142 aa9.6□□□□□ -0.87
SEC22A-204ENST00000473494 POLR3KQ9Y2Y1 108 aaPredicted RBP9.6□□□□□ -0.87
SEC22A-204ENST00000473494 PCDHGC5Q9Y5F6 944 aa9.6□□□□□ -0.87
SEC22A-204ENST00000473494 SYNGAP1Q96PV0 1343 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 A0A0A0MRY4 1105 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 DLL1O00548 723 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 ARHGEF15O94989 841 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 PDE3AQ14432 1141 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 WIPI1Q5MNZ9 446 aaPredicted RBP9.59□□□□□ -0.87
SEC22A-204ENST00000473494 NBPF6Q5VWK0 638 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 FBXO11Q86XK2 927 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 NEDD1Q8NHV4 660 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 SHDQ96IW2 340 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 NBPF4Q96M43 638 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 LNPKQ9C0E8 428 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 KCNK4Q9NYG8 393 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 PPT2Q9UMR5 302 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 PCDHA4Q9UN74 947 aa9.59□□□□□ -0.87
SEC22A-204ENST00000473494 ATE1O95260 518 aa9.58□□□□□ -0.88
SEC22A-204ENST00000473494 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
SEC22A-204ENST00000473494 SOGA3Q5TF21 947 aa9.58□□□□□ -0.88
SEC22A-204ENST00000473494 LINC00114Q6XXX2 140 aa9.58□□□□□ -0.88
SEC22A-204ENST00000473494 DPH6Q7L8W6 267 aa9.58□□□□□ -0.88
SEC22A-204ENST00000473494 WDR18Q9BV38 432 aa9.58□□□□□ -0.88
SEC22A-204ENST00000473494 EHMT1Q9H9B1 1298 aa9.58□□□□□ -0.88
SEC22A-204ENST00000473494 RRAGCQ9HB90 399 aa9.58□□□□□ -0.88
SEC22A-204ENST00000473494 TACC3Q9Y6A5 838 aa9.58□□□□□ -0.88
SEC22A-204ENST00000473494 PRR36Q9H6K5 1346 aa9.57□□□□□ -0.88
SEC22A-204ENST00000473494 GFRA2O00451 464 aa9.57□□□□□ -0.88
SEC22A-204ENST00000473494 GNB5O14775 395 aa9.57□□□□□ -0.88
SEC22A-204ENST00000473494 DDX3YO15523 660 aaKnown RBP9.57□□□□□ -0.88
SEC22A-204ENST00000473494 DLGAP3O95886 979 aa9.57□□□□□ -0.88
SEC22A-204ENST00000473494 IMPDH2P12268 514 aa9.57□□□□□ -0.88
SEC22A-204ENST00000473494 CDK8P49336 464 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms