RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 BTDP43251 543 aa25.22■■□□□ 1.63
TOP3A-204ENST00000472959 TNNI2P48788 182 aa25.22■■□□□ 1.63
TOP3A-204ENST00000472959 EDC3Q96F86 508 aaKnown RBP25.22■■□□□ 1.63
TOP3A-204ENST00000472959 NOL10Q9BSC4 688 aaKnown RBP25.22■■□□□ 1.63
TOP3A-204ENST00000472959 USP40Q9NVE5 1235 aa25.22■■□□□ 1.63
TOP3A-204ENST00000472959 BAG3O95817 575 aa25.21■■□□□ 1.63
TOP3A-204ENST00000472959 MAGEB6Q8N7X4 407 aa25.21■■□□□ 1.63
TOP3A-204ENST00000472959 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.21■■□□□ 1.63
TOP3A-204ENST00000472959 TMEM88BA6NKF7 163 aa25.2■■□□□ 1.62
TOP3A-204ENST00000472959 CYP7A1P22680 504 aa25.2■■□□□ 1.62
TOP3A-204ENST00000472959 FMR1Q06787 632 aaKnown RBP eCLIP25.2■■□□□ 1.62
TOP3A-204ENST00000472959 RASA3Q14644 834 aa25.2■■□□□ 1.62
TOP3A-204ENST00000472959 SLC9C2Q5TAH2 1124 aa25.2■■□□□ 1.62
TOP3A-204ENST00000472959 CENPQQ7L2Z9 268 aaPredicted RBP25.2■■□□□ 1.62
TOP3A-204ENST00000472959 CDCA5Q96FF9 252 aa25.2■■□□□ 1.62
TOP3A-204ENST00000472959 SCAF8Q9UPN6 1271 aaKnown RBP25.2■■□□□ 1.62
TOP3A-204ENST00000472959 TCP10L2B9ZVM9 353 aa25.19■■□□□ 1.62
TOP3A-204ENST00000472959 CELF2O95319 508 aaKnown RBP25.19■■□□□ 1.62
TOP3A-204ENST00000472959 PPP4CP60510 307 aa25.19■■□□□ 1.62
TOP3A-204ENST00000472959 DLK2Q6UY11 383 aa25.19■■□□□ 1.62
TOP3A-204ENST00000472959 FAM83AQ86UY5 434 aa25.19■■□□□ 1.62
TOP3A-204ENST00000472959 CERS3Q8IU89 383 aa25.19■■□□□ 1.62
TOP3A-204ENST00000472959 PDE6AP16499 860 aa25.18■■□□□ 1.62
TOP3A-204ENST00000472959 PLCG2P16885 1265 aa25.18■■□□□ 1.62
TOP3A-204ENST00000472959 CST9Q5W186 159 aa25.18■■□□□ 1.62
TOP3A-204ENST00000472959 ZSCAN25Q6NSZ9 544 aa25.18■■□□□ 1.62
TOP3A-204ENST00000472959 PLEKHM2Q8IWE5 1019 aa25.18■■□□□ 1.62
TOP3A-204ENST00000472959 CCDC136Q96JN2 1154 aa25.18■■□□□ 1.62
TOP3A-204ENST00000472959 OSBPL3Q9H4L5 887 aa25.18■■□□□ 1.62
TOP3A-204ENST00000472959 CREBZFQ9NS37 354 aa25.18■■□□□ 1.62
TOP3A-204ENST00000472959 CACNB3P54284 484 aa25.17■■□□□ 1.62
TOP3A-204ENST00000472959 ADGRA1Q86SQ6 560 aa25.17■■□□□ 1.62
TOP3A-204ENST00000472959 KBTBD3Q8NAB2 608 aa25.17■■□□□ 1.62
TOP3A-204ENST00000472959 IDI2Q9BXS1 227 aa25.17■■□□□ 1.62
TOP3A-204ENST00000472959 ZNF408Q9H9D4 720 aa25.17■■□□□ 1.62
TOP3A-204ENST00000472959 NF2P35240 595 aa25.16■■□□□ 1.62
TOP3A-204ENST00000472959 RHBDL3P58872 404 aa25.16■■□□□ 1.62
TOP3A-204ENST00000472959 SUPT20HL1Q3ZLR7 823 aa25.16■■□□□ 1.62
TOP3A-204ENST00000472959 NPM3O75607 178 aaKnown RBP25.15■■□□□ 1.62
TOP3A-204ENST00000472959 LRRFIP1Q32MZ4 808 aaKnown RBP25.15■■□□□ 1.62
TOP3A-204ENST00000472959 PRAMEF18Q5VWM3 479 aa25.15■■□□□ 1.62
TOP3A-204ENST00000472959 AATFQ9NY61 560 aaKnown RBP eCLIP25.15■■□□□ 1.62
TOP3A-204ENST00000472959 MYH2Q9UKX2 1941 aa25.15■■□□□ 1.62
TOP3A-204ENST00000472959 CNTNAP1P78357 1384 aa25.15■■□□□ 1.62
TOP3A-204ENST00000472959 POLR2AP24928 1970 aaKnown RBP25.14■■□□□ 1.62
TOP3A-204ENST00000472959 ZNF532Q9HCE3 1301 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 ECM29Q5VYK3 1845 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 MAST2Q6P0Q8 1798 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 TCRBV5S4A2TA0A5A2 114 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 ENTPD3O75355 529 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 ADD2P35612 726 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 FKBP1BP68106 108 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 NFIAQ12857 509 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 UBE3CQ15386 1083 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 C2orf69Q8N8R5 385 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 FAM151AQ8WW52 585 aa25.14■■□□□ 1.62
TOP3A-204ENST00000472959 WDHD1O75717 1129 aaPredicted RBP25.13■■□□□ 1.61
TOP3A-204ENST00000472959 TMEM39BQ9GZU3 492 aa25.13■■□□□ 1.61
TOP3A-204ENST00000472959 GBA2Q9HCG7 927 aaPredicted RBP25.13■■□□□ 1.61
TOP3A-204ENST00000472959 FAM198AQ9UFP1 575 aa25.13■■□□□ 1.61
TOP3A-204ENST00000472959 ZFYP08048 801 aaPredicted RBP25.12■■□□□ 1.61
TOP3A-204ENST00000472959 PDE4AP27815 886 aa25.12■■□□□ 1.61
TOP3A-204ENST00000472959 RGS3P49796 1198 aa25.12■■□□□ 1.61
TOP3A-204ENST00000472959 TEX11Q8IYF3 940 aa25.12■■□□□ 1.61
TOP3A-204ENST00000472959 MIGA1Q8NAN2 632 aa25.12■■□□□ 1.61
TOP3A-204ENST00000472959 SH3RF3Q8TEJ3 882 aaPredicted RBP25.12■■□□□ 1.61
TOP3A-204ENST00000472959 EVI5LQ96CN4 794 aa25.12■■□□□ 1.61
TOP3A-204ENST00000472959 TEPSINQ96N21 525 aa25.12■■□□□ 1.61
TOP3A-204ENST00000472959 RFX7Q2KHR2 1363 aa25.11■■□□□ 1.61
TOP3A-204ENST00000472959 RPAP1Q9BWH6 1393 aaPredicted RBP25.11■■□□□ 1.61
TOP3A-204ENST00000472959 TCP10Q12799 353 aa25.11■■□□□ 1.61
TOP3A-204ENST00000472959 NBPF12Q5TAG4 269 aaPredicted RBP25.11■■□□□ 1.61
TOP3A-204ENST00000472959 TICAM2Q86XR7 235 aa25.11■■□□□ 1.61
TOP3A-204ENST00000472959 HOOK2Q96ED9 719 aa25.11■■□□□ 1.61
TOP3A-204ENST00000472959 PPP4R2Q9NY27 417 aa25.11■■□□□ 1.61
TOP3A-204ENST00000472959 DOCK2Q92608 1830 aa25.11■■□□□ 1.61
TOP3A-204ENST00000472959 MAGEB6P1A0A0J9YX57 407 aa25.1■■□□□ 1.61
TOP3A-204ENST00000472959 DYNLL1P63167 89 aaKnown RBP25.1■■□□□ 1.61
TOP3A-204ENST00000472959 FSD1Q9BTV5 496 aa25.1■■□□□ 1.61
TOP3A-204ENST00000472959 ABT1Q9ULW3 272 aaKnown RBP25.1■■□□□ 1.61
TOP3A-204ENST00000472959 TLL2Q9Y6L7 1015 aa25.1■■□□□ 1.61
TOP3A-204ENST00000472959 RNF113AO15541 343 aaKnown RBP25.09■■□□□ 1.61
TOP3A-204ENST00000472959 SAPCD2Q86UD0 394 aa25.09■■□□□ 1.61
TOP3A-204ENST00000472959 RIOK1Q9BRS2 568 aaKnown RBP25.09■■□□□ 1.61
TOP3A-204ENST00000472959 PPP1R12BO60237 982 aaPredicted RBP25.08■■□□□ 1.61
TOP3A-204ENST00000472959 PICALMQ13492 652 aa25.08■■□□□ 1.61
TOP3A-204ENST00000472959 DDX4Q9NQI0 724 aaKnown RBP25.08■■□□□ 1.61
TOP3A-204ENST00000472959 MYO5AQ9Y4I1 1855 aaKnown RBP25.07■■□□□ 1.6
TOP3A-204ENST00000472959 TTLL12Q14166 644 aaPredicted RBP25.07■■□□□ 1.6
TOP3A-204ENST00000472959 ARMC9Q7Z3E5 817 aa25.07■■□□□ 1.6
TOP3A-204ENST00000472959 ZFPM1Q8IX07 1006 aa25.07■■□□□ 1.6
TOP3A-204ENST00000472959 HHIPL1Q96JK4 782 aa25.07■■□□□ 1.6
TOP3A-204ENST00000472959 TRPM7Q96QT4 1865 aa25.06■■□□□ 1.6
TOP3A-204ENST00000472959 TRIM6-TRIM34B2RNG4 842 aa25.06■■□□□ 1.6
TOP3A-204ENST00000472959 HTRA3P83110 453 aa25.06■■□□□ 1.6
TOP3A-204ENST00000472959 CDAN1Q8IWY9 1227 aa25.06■■□□□ 1.6
TOP3A-204ENST00000472959 TGFBRAP1Q8WUH2 860 aa25.06■■□□□ 1.6
TOP3A-204ENST00000472959 APPBP2Q92624 585 aa25.06■■□□□ 1.6
TOP3A-204ENST00000472959 CRNKL1Q9BZJ0 848 aaKnown RBP25.06■■□□□ 1.6
TOP3A-204ENST00000472959 RASSF10A6NK89 507 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms