RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 AGMOQ6ZNB7 445 aa9.49□□□□□ -0.89
CLK1-209ENST00000472679 PHC3Q8NDX5 983 aa9.49□□□□□ -0.89
CLK1-209ENST00000472679 RSRP1Q9BUV0 290 aa9.49□□□□□ -0.89
CLK1-209ENST00000472679 RNF208Q9H0X6 261 aa9.49□□□□□ -0.89
CLK1-209ENST00000472679 GGT7Q9UJ14 662 aa9.49□□□□□ -0.89
CLK1-209ENST00000472679 PCDHB5Q9Y5E4 795 aa9.49□□□□□ -0.89
CLK1-209ENST00000472679 TFE3P19532 575 aaPredicted RBP9.48□□□□□ -0.89
CLK1-209ENST00000472679 HDLBPQ00341 1268 aaKnown RBP9.48□□□□□ -0.89
CLK1-209ENST00000472679 Q6ZS46 218 aa9.48□□□□□ -0.89
CLK1-209ENST00000472679 TXNRD3Q86VQ6 643 aa9.48□□□□□ -0.89
CLK1-209ENST00000472679 METTL16Q86W50 562 aaKnown RBP9.48□□□□□ -0.89
CLK1-209ENST00000472679 GPBAR1Q8TDU6 330 aa9.48□□□□□ -0.89
CLK1-209ENST00000472679 KBTBD4Q9NVX7 518 aa9.48□□□□□ -0.89
CLK1-209ENST00000472679 CACNA2D2Q9NY47 1150 aa9.48□□□□□ -0.89
CLK1-209ENST00000472679 CYP8B1Q9UNU6 501 aa9.48□□□□□ -0.89
CLK1-209ENST00000472679 RPS26P62854 115 aaKnown RBP9.47□□□□□ -0.89
CLK1-209ENST00000472679 LRRC14Q15048 493 aa9.47□□□□□ -0.89
CLK1-209ENST00000472679 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
CLK1-209ENST00000472679 HS2ST1Q7LGA3 356 aa9.47□□□□□ -0.89
CLK1-209ENST00000472679 RNF34Q969K3 372 aa9.47□□□□□ -0.89
CLK1-209ENST00000472679 MEGF10Q96KG7 1140 aa9.47□□□□□ -0.89
CLK1-209ENST00000472679 UBL7Q96S82 380 aaPredicted RBP9.47□□□□□ -0.89
CLK1-209ENST00000472679 WDR18Q9BV38 432 aa9.47□□□□□ -0.89
CLK1-209ENST00000472679 METTL5Q9NRN9 209 aaKnown RBP9.47□□□□□ -0.89
CLK1-209ENST00000472679 MINDY4BA8MYZ0 360 aa9.46□□□□□ -0.9
CLK1-209ENST00000472679 AOC2O75106 756 aa9.46□□□□□ -0.9
CLK1-209ENST00000472679 RLBP1P12271 317 aa9.46□□□□□ -0.9
CLK1-209ENST00000472679 DRD2P14416 443 aa9.46□□□□□ -0.9
CLK1-209ENST00000472679 GLB1P16278 677 aa9.46□□□□□ -0.9
CLK1-209ENST00000472679 GBP2P32456 591 aaPredicted RBP9.46□□□□□ -0.9
CLK1-209ENST00000472679 RELL1Q8IUW5 271 aa9.46□□□□□ -0.9
CLK1-209ENST00000472679 SMG8Q8ND04 991 aaKnown RBP9.46□□□□□ -0.9
CLK1-209ENST00000472679 GAL3ST3Q96A11 431 aa9.46□□□□□ -0.9
CLK1-209ENST00000472679 TMEM74Q96NL1 305 aa9.46□□□□□ -0.9
CLK1-209ENST00000472679 KRT82Q9NSB4 513 aa9.46□□□□□ -0.9
CLK1-209ENST00000472679 TRIM37O94972 964 aa9.45□□□□□ -0.9
CLK1-209ENST00000472679 PF4P02776 101 aa9.45□□□□□ -0.9
CLK1-209ENST00000472679 SEPT6Q14141 434 aa9.45□□□□□ -0.9
CLK1-209ENST00000472679 KIF4BQ2VIQ3 1234 aa9.45□□□□□ -0.9
CLK1-209ENST00000472679 ZNF394Q53GI3 561 aa9.45□□□□□ -0.9
CLK1-209ENST00000472679 AKAP4Q5JQC9 854 aa9.45□□□□□ -0.9
CLK1-209ENST00000472679 RHOVQ96L33 236 aa9.45□□□□□ -0.9
CLK1-209ENST00000472679 SUGCTQ9HAC7 445 aa9.45□□□□□ -0.9
CLK1-209ENST00000472679 RAD18Q9NS91 495 aa9.45□□□□□ -0.9
CLK1-209ENST00000472679 TIAF1O95411 115 aa9.44□□□□□ -0.9
CLK1-209ENST00000472679 GATA4P43694 442 aa9.44□□□□□ -0.9
CLK1-209ENST00000472679 PREPP48147 710 aa9.44□□□□□ -0.9
CLK1-209ENST00000472679 HP1BP3Q5SSJ5 553 aaPredicted RBP9.44□□□□□ -0.9
CLK1-209ENST00000472679 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.44□□□□□ -0.9
CLK1-209ENST00000472679 DZIP1LQ8IYY4 767 aaKnown RBP9.44□□□□□ -0.9
CLK1-209ENST00000472679 C12orf50Q8NA57 414 aaPredicted RBP9.44□□□□□ -0.9
CLK1-209ENST00000472679 SSBP4Q9BWG4 385 aaPredicted RBP9.44□□□□□ -0.9
CLK1-209ENST00000472679 IGSF5Q9NSI5 407 aa9.44□□□□□ -0.9
CLK1-209ENST00000472679 PPP1R9AQ9ULJ8 1098 aa9.44□□□□□ -0.9
CLK1-209ENST00000472679 PCDHGC5Q9Y5F6 944 aa9.44□□□□□ -0.9
CLK1-209ENST00000472679 PCDHGB7Q9Y5F8 929 aa9.44□□□□□ -0.9
CLK1-209ENST00000472679 ADH5P11766 374 aa9.43□□□□□ -0.9
CLK1-209ENST00000472679 TCF3P15923 654 aa9.43□□□□□ -0.9
CLK1-209ENST00000472679 FAM160A1Q05DH4 1040 aa9.43□□□□□ -0.9
CLK1-209ENST00000472679 CAMK2GQ13555 558 aaPredicted RBP9.43□□□□□ -0.9
CLK1-209ENST00000472679 ANKRD34AQ69YU3 496 aa9.43□□□□□ -0.9
CLK1-209ENST00000472679 FDX2Q6P4F2 183 aa9.43□□□□□ -0.9
CLK1-209ENST00000472679 ACSBG1Q96GR2 724 aa9.43□□□□□ -0.9
CLK1-209ENST00000472679 CYP4F12Q9HCS2 524 aa9.43□□□□□ -0.9
CLK1-209ENST00000472679 CDK8P49336 464 aa9.42□□□□□ -0.9
CLK1-209ENST00000472679 SOX4Q06945 474 aaPredicted RBP9.42□□□□□ -0.9
CLK1-209ENST00000472679 PWP1Q13610 501 aa9.42□□□□□ -0.9
CLK1-209ENST00000472679 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
CLK1-209ENST00000472679 NT5DC4Q86YG4 428 aa9.42□□□□□ -0.9
CLK1-209ENST00000472679 JARID2Q92833 1246 aaPredicted RBP9.42□□□□□ -0.9
CLK1-209ENST00000472679 FAM46AQ96IP4 442 aaKnown RBP9.42□□□□□ -0.9
CLK1-209ENST00000472679 PCDHA4Q9UN74 947 aa9.42□□□□□ -0.9
CLK1-209ENST00000472679 TMPRSS2O15393 492 aa9.41□□□□□ -0.9
CLK1-209ENST00000472679 LMNB1P20700 586 aa9.41□□□□□ -0.9
CLK1-209ENST00000472679 GARTP22102 1010 aa9.41□□□□□ -0.9
CLK1-209ENST00000472679 RACK1P63244 317 aaKnown RBP9.41□□□□□ -0.9
CLK1-209ENST00000472679 LMNB2Q03252 620 aa9.41□□□□□ -0.9
CLK1-209ENST00000472679 SCARA3Q6AZY7 606 aa9.41□□□□□ -0.9
CLK1-209ENST00000472679 BNC2Q6ZN30 1099 aaPredicted RBP9.41□□□□□ -0.9
CLK1-209ENST00000472679 USP48Q86UV5 1035 aa9.41□□□□□ -0.9
CLK1-209ENST00000472679 TRIM42Q8IWZ5 723 aa9.41□□□□□ -0.9
CLK1-209ENST00000472679 C2CD4AQ8NCU7 369 aaPredicted RBP9.41□□□□□ -0.9
CLK1-209ENST00000472679 CEP41Q9BYV8 373 aa9.41□□□□□ -0.9
CLK1-209ENST00000472679 MIR1-1HGQ9H1L0 117 aa9.41□□□□□ -0.9
CLK1-209ENST00000472679 ADAMTS1Q9UHI8 967 aa9.41□□□□□ -0.9
CLK1-209ENST00000472679 SYNGAP1Q96PV0 1343 aa9.4□□□□□ -0.9
CLK1-209ENST00000472679 PROCP04070 461 aa9.4□□□□□ -0.9
CLK1-209ENST00000472679 SLFN14P0C7P3 912 aa9.4□□□□□ -0.9
CLK1-209ENST00000472679 INPP5AQ14642 412 aa9.4□□□□□ -0.9
CLK1-209ENST00000472679 ZC3H12AQ5D1E8 599 aaKnown RBP9.4□□□□□ -0.9
CLK1-209ENST00000472679 FBXL19Q6PCT2 694 aa9.4□□□□□ -0.9
CLK1-209ENST00000472679 ARMC10Q8N2F6 343 aa9.4□□□□□ -0.9
CLK1-209ENST00000472679 DDX41Q9UJV9 622 aaKnown RBP9.4□□□□□ -0.9
CLK1-209ENST00000472679 AP4E1Q9UPM8 1137 aa9.4□□□□□ -0.9
CLK1-209ENST00000472679 CSADQ9Y600 493 aa9.4□□□□□ -0.9
CLK1-209ENST00000472679 DCDC2CA8MYV0 355 aa9.39□□□□□ -0.91
CLK1-209ENST00000472679 SART1O43290 800 aaKnown RBP9.39□□□□□ -0.91
CLK1-209ENST00000472679 F13A1P00488 732 aa9.39□□□□□ -0.91
CLK1-209ENST00000472679 EIF4A3P38919 411 aaKnown RBP9.39□□□□□ -0.91
CLK1-209ENST00000472679 ID3Q02535 119 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms