RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ADH7P40394 386 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 PDE3BQ13370 1112 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 NAA30Q147X3 362 aaPredicted RBP5.03□□□□□ -1.6
XRN1-209ENST00000472625 NBPF8Q3BBV2 869 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 C11orf91Q3C1V1 193 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 DEFB132Q7Z7B7 95 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 ZNF417Q8TAU3 575 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 DCAF11Q8TEB1 546 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 ZNF587Q96SQ5 575 aaPredicted RBP5.03□□□□□ -1.6
XRN1-209ENST00000472625 ANKIB1Q9P2G1 1089 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 KCNH4Q9UQ05 1017 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 USP20Q9Y2K6 914 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 TRPM3Q9HCF6 1732 aaPredicted RBP5.03□□□□□ -1.6
XRN1-209ENST00000472625 POLR3AO14802 1390 aaPredicted RBP5.03□□□□□ -1.6
XRN1-209ENST00000472625 KIAA0232Q92628 1395 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 SPATA31A1Q5TZJ5 1347 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 K7ELQ4 463 aaPredicted RBP5.02□□□□□ -1.61
XRN1-209ENST00000472625 SIN3BO75182 1162 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 MICAL2O94851 1124 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 ALAS2P22557 587 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 IDH3AP50213 366 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 EVA1CP58658 441 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 DOC2BQ14184 412 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 TRIP4Q15650 581 aaPredicted RBP5.02□□□□□ -1.61
XRN1-209ENST00000472625 C16orf46Q6P387 395 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 HIRIP3Q9BW71 556 aaPredicted RBP5.02□□□□□ -1.61
XRN1-209ENST00000472625 NOP53Q9NZM5 478 aaKnown RBP5.02□□□□□ -1.61
XRN1-209ENST00000472625 OVOS2A0A0G2JMS6 1433 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 OVOS2A0A0J9YW53 1432 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 OVOS2Q6IE36 1432 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 SSH2Q76I76 1423 aa5.02□□□□□ -1.61
XRN1-209ENST00000472625 ADARB2-AS1A8MUL3 147 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 ZBTB42B2RXF5 422 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 PIK3R2O00459 728 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 EGFRP00533 1210 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 C20orf204Q6ZNR8 217 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 NLRP13Q86W25 1043 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 TREML1Q86YW5 311 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 TCP11L2Q8N4U5 519 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 NUDT16Q96DE0 195 aaKnown RBP5.01□□□□□ -1.61
XRN1-209ENST00000472625 IFT43Q96FT9 208 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 UBE2OQ9C0C9 1292 aaKnown RBP5.01□□□□□ -1.61
XRN1-209ENST00000472625 NINLQ9Y2I6 1382 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 UTRNP46939 3433 aa5.01□□□□□ -1.61
XRN1-209ENST00000472625 KIAA1210Q9ULL0 1709 aa5□□□□□ -1.61
XRN1-209ENST00000472625 USP19O94966 1318 aa5□□□□□ -1.61
XRN1-209ENST00000472625 PRR36Q9H6K5 1346 aa5□□□□□ -1.61
XRN1-209ENST00000472625 NRKQ7Z2Y5 1582 aa5□□□□□ -1.61
XRN1-209ENST00000472625 CRB1P82279 1406 aa5□□□□□ -1.61
XRN1-209ENST00000472625 NPR3P17342 541 aa5□□□□□ -1.61
XRN1-209ENST00000472625 R3HDM1Q15032 1099 aaKnown RBP5□□□□□ -1.61
XRN1-209ENST00000472625 KRT25Q7Z3Z0 450 aa5□□□□□ -1.61
XRN1-209ENST00000472625 ALYREFQ86V81 257 aaKnown RBP5□□□□□ -1.61
XRN1-209ENST00000472625 MICALL1Q8N3F8 863 aa5□□□□□ -1.61
XRN1-209ENST00000472625 ABTB2Q8N961 1025 aa5□□□□□ -1.61
XRN1-209ENST00000472625 RETREG2Q8NC44 543 aa5□□□□□ -1.61
XRN1-209ENST00000472625 NUDT8Q8WV74 236 aa5□□□□□ -1.61
XRN1-209ENST00000472625 ARID3AQ99856 593 aa5□□□□□ -1.61
XRN1-209ENST00000472625 PPP1R1BQ9UD71 204 aaPredicted RBP5□□□□□ -1.61
XRN1-209ENST00000472625 NAGPAQ9UK23 515 aa5□□□□□ -1.61
XRN1-209ENST00000472625 ABCC6O95255 1503 aa5□□□□□ -1.61
XRN1-209ENST00000472625 PHRF1Q9P1Y6 1649 aaKnown RBP5□□□□□ -1.61
XRN1-209ENST00000472625 ARHGEF28Q8N1W1 1705 aaKnown RBP5□□□□□ -1.61
XRN1-209ENST00000472625 COL5A2P05997 1499 aaPredicted RBP5□□□□□ -1.61
XRN1-209ENST00000472625 ACEP12821 1306 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 CENPJQ9HC77 1338 aaPredicted RBP4.99□□□□□ -1.61
XRN1-209ENST00000472625 TOPAZ1Q8N9V7 1692 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 BCL9O00512 1426 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 PPIP5K1Q6PFW1 1433 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 APBA3O96018 575 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 NFKB1P19838 968 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 ARSDP51689 593 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 MTMR3Q13615 1198 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 GRIK4Q16099 956 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 ERICH6Q7L0X2 663 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 KCNH5Q8NCM2 988 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 CDK19Q9BWU1 502 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 SLC6A14Q9UN76 642 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 USTQ9Y2C2 406 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 TNS1Q9HBL0 1735 aaKnown RBP4.99□□□□□ -1.61
XRN1-209ENST00000472625 CRYBG1Q9Y4K1 1723 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 AATKQ6ZMQ8 1374 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 BRWD3Q6RI45 1802 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 RGPD3A6NKT7 1758 aaPredicted RBP4.99□□□□□ -1.61
XRN1-209ENST00000472625 RGPD4Q7Z3J3 1758 aa4.99□□□□□ -1.61
XRN1-209ENST00000472625 EVC2Q86UK5 1308 aa4.98□□□□□ -1.61
XRN1-209ENST00000472625 PTCD1O75127 700 aaKnown RBP4.98□□□□□ -1.61
XRN1-209ENST00000472625 TRIM37O94972 964 aa4.98□□□□□ -1.61
XRN1-209ENST00000472625 SPATA31C1P0DKV0 1188 aa4.98□□□□□ -1.61
XRN1-209ENST00000472625 NID1P14543 1247 aa4.98□□□□□ -1.61
XRN1-209ENST00000472625 HMGB2P26583 209 aaKnown RBP4.98□□□□□ -1.61
XRN1-209ENST00000472625 TARSP26639 723 aaKnown RBP4.98□□□□□ -1.61
XRN1-209ENST00000472625 ZC3H6P61129 1189 aaKnown RBP4.98□□□□□ -1.61
XRN1-209ENST00000472625 PLAURQ03405 335 aa4.98□□□□□ -1.61
XRN1-209ENST00000472625 NEUROD1Q13562 356 aa4.98□□□□□ -1.61
XRN1-209ENST00000472625 DDB1Q16531 1140 aa4.98□□□□□ -1.61
XRN1-209ENST00000472625 HIF1AQ16665 826 aa4.98□□□□□ -1.61
XRN1-209ENST00000472625 CAMKK2Q96RR4 588 aa4.98□□□□□ -1.61
XRN1-209ENST00000472625 SPON1Q9HCB6 807 aa4.98□□□□□ -1.61
XRN1-209ENST00000472625 DNAJB12Q9NXW2 375 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms