RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 RFC4P35249 363 aa21.74■■□□□ 1.07
COL20A1-205ENST00000471582 FOSBP53539 338 aa21.74■■□□□ 1.07
COL20A1-205ENST00000471582 TYRO3Q06418 890 aa21.74■■□□□ 1.07
COL20A1-205ENST00000471582 SGMS1Q86VZ5 419 aa21.74■■□□□ 1.07
COL20A1-205ENST00000471582 USP28Q96RU2 1077 aa21.74■■□□□ 1.07
COL20A1-205ENST00000471582 GNL3LQ9NVN8 582 aaKnown RBP21.74■■□□□ 1.07
COL20A1-205ENST00000471582 USP25Q9UHP3 1055 aa21.74■■□□□ 1.07
COL20A1-205ENST00000471582 NEDD4P46934 1319 aa21.73■■□□□ 1.07
COL20A1-205ENST00000471582 GSG1L2A8MUP6 293 aa21.73■■□□□ 1.07
COL20A1-205ENST00000471582 ZNF500O60304 480 aaPredicted RBP21.73■■□□□ 1.07
COL20A1-205ENST00000471582 SMIM5Q71RC9 77 aa21.73■■□□□ 1.07
COL20A1-205ENST00000471582 BRAPQ7Z569 592 aa21.73■■□□□ 1.07
COL20A1-205ENST00000471582 NBPF5PQ86XG9 351 aaPredicted RBP21.73■■□□□ 1.07
COL20A1-205ENST00000471582 FAM200AQ8TCP9 573 aa21.73■■□□□ 1.07
COL20A1-205ENST00000471582 ARMT1Q9H993 441 aa21.73■■□□□ 1.07
COL20A1-205ENST00000471582 B4E1Z4 1266 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 LIFRP42702 1097 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 CAMK4Q16566 473 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 APOA5Q6Q788 366 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 TPTE2Q6XPS3 522 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 AMIGO3Q86WK7 504 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 IGDCC4Q8TDY8 1250 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 RTEL1Q9NZ71 1219 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.72■■□□□ 1.07
COL20A1-205ENST00000471582 UBR3Q6ZT12 1888 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 METAP2P50579 478 aaKnown RBP eCLIP21.72■■□□□ 1.07
COL20A1-205ENST00000471582 CPLX2Q6PUV4 134 aaKnown RBP21.72■■□□□ 1.07
COL20A1-205ENST00000471582 MTA3Q9BTC8 594 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 KRT23Q9C075 422 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 LRP2BPQ9P2M1 347 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 MRVI1Q9Y6F6 885 aa21.72■■□□□ 1.07
COL20A1-205ENST00000471582 PLSCR1O15162 318 aa21.71■■□□□ 1.07
COL20A1-205ENST00000471582 GUCY1B3Q02153 619 aa21.71■■□□□ 1.07
COL20A1-205ENST00000471582 AKNAD1Q5T1N1 836 aa21.71■■□□□ 1.07
COL20A1-205ENST00000471582 C3orf67Q6ZVT6 689 aa21.71■■□□□ 1.07
COL20A1-205ENST00000471582 DENND2AQ9ULE3 1009 aa21.71■■□□□ 1.07
COL20A1-205ENST00000471582 CTAGE5O15320 804 aa21.7■■□□□ 1.07
COL20A1-205ENST00000471582 ADCY5O95622 1261 aa21.7■■□□□ 1.07
COL20A1-205ENST00000471582 CAVIN2O95810 425 aa21.7■■□□□ 1.07
COL20A1-205ENST00000471582 TXNRD1Q16881 649 aa21.7■■□□□ 1.07
COL20A1-205ENST00000471582 LCORLQ8N3X6 602 aa21.7■■□□□ 1.07
COL20A1-205ENST00000471582 STAG1Q8WVM7 1258 aa21.7■■□□□ 1.07
COL20A1-205ENST00000471582 NLRP3Q96P20 1036 aa21.7■■□□□ 1.07
COL20A1-205ENST00000471582 LY9Q9HBG7 655 aa21.7■■□□□ 1.07
COL20A1-205ENST00000471582 NID2Q14112 1375 aa21.7■■□□□ 1.07
COL20A1-205ENST00000471582 PPFIA3O75145 1194 aa21.7■■□□□ 1.06
COL20A1-205ENST00000471582 PTMAP06454 111 aaKnown RBP21.7■■□□□ 1.06
COL20A1-205ENST00000471582 CEBPZQ03701 1054 aaKnown RBP21.7■■□□□ 1.06
COL20A1-205ENST00000471582 SLC4A4Q9Y6R1 1079 aa21.7■■□□□ 1.06
COL20A1-205ENST00000471582 ZBTB43O43298 467 aa21.69■■□□□ 1.06
COL20A1-205ENST00000471582 NKX2-3Q8TAU0 364 aa21.69■■□□□ 1.06
COL20A1-205ENST00000471582 FTOQ9C0B1 505 aaKnown RBP eCLIP21.69■■□□□ 1.06
COL20A1-205ENST00000471582 POLR3EQ9NVU0 708 aa21.69■■□□□ 1.06
COL20A1-205ENST00000471582 YEATS4O95619 227 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 TDO2P48775 406 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 CAVIN4Q5BKX8 364 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 TMEM67Q5HYA8 995 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 CCDC73Q6ZRK6 1079 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 MFSD6Q6ZSS7 791 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 CCAR1Q8IX12 1150 aaKnown RBP21.68■■□□□ 1.06
COL20A1-205ENST00000471582 CKAP2LQ8IYA6 745 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 MINPP1Q9UNW1 487 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 SEMA3EO15041 775 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 NPHP1O15259 732 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 FAM160A1Q05DH4 1040 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 PROM2Q8N271 834 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 KCNG4Q8TDN1 519 aa21.68■■□□□ 1.06
COL20A1-205ENST00000471582 RNF41Q9H4P4 317 aaPredicted RBP21.68■■□□□ 1.06
COL20A1-205ENST00000471582 COL1A1P02452 1464 aaPredicted RBP21.68■■□□□ 1.06
COL20A1-205ENST00000471582 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.67■■□□□ 1.06
COL20A1-205ENST00000471582 A0A1W2PQ27 194 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 A0A1W2PQ64 194 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 A0A1W2PQD8 194 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 CTDSPL2Q05D32 466 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 SASS6Q6UVJ0 657 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 ZSWIM5Q9P217 1185 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 PDS5AQ29RF7 1337 aaKnown RBP21.67■■□□□ 1.06
COL20A1-205ENST00000471582 PRKAB2O43741 272 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 APBA3O96018 575 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 ME1P48163 572 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 KIF23Q02241 960 aaPredicted RBP21.67■■□□□ 1.06
COL20A1-205ENST00000471582 MYSM1Q5VVJ2 828 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 RAB11FIP4Q86YS3 637 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 LINC00301Q8NCQ3 95 aa21.67■■□□□ 1.06
COL20A1-205ENST00000471582 CACNA1SQ13698 1873 aa21.66■■□□□ 1.06
COL20A1-205ENST00000471582 STK36Q9NRP7 1315 aa21.66■■□□□ 1.06
COL20A1-205ENST00000471582 CYP7A1P22680 504 aa21.66■■□□□ 1.06
COL20A1-205ENST00000471582 GYG1P46976 350 aa21.66■■□□□ 1.06
COL20A1-205ENST00000471582 SART3Q15020 963 aaKnown RBP21.66■■□□□ 1.06
COL20A1-205ENST00000471582 ADALQ6DHV7 355 aa21.66■■□□□ 1.06
COL20A1-205ENST00000471582 NFXL1Q6ZNB6 911 aa21.66■■□□□ 1.06
COL20A1-205ENST00000471582 ENGASEQ8NFI3 743 aa21.66■■□□□ 1.06
COL20A1-205ENST00000471582 TNS1Q9HBL0 1735 aaKnown RBP21.66■■□□□ 1.06
COL20A1-205ENST00000471582 TAF1P21675 1872 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 GOLGA8AA7E2F4 631 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 IFIT3O14879 490 aaKnown RBP21.65■■□□□ 1.06
COL20A1-205ENST00000471582 RCAN1P53805 252 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 SNW1Q13573 536 aaKnown RBP21.65■■□□□ 1.06
COL20A1-205ENST00000471582 NTRK3Q16288 839 aa21.65■■□□□ 1.06
COL20A1-205ENST00000471582 ANO6Q4KMQ2 910 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms