RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 MTMR14Q8NCE2 650 aa13.94□□□□□ -0.18
FN1-217ENST00000471193 NOL10Q9BSC4 688 aaKnown RBP13.94□□□□□ -0.18
FN1-217ENST00000471193 LSG1Q9H089 658 aaKnown RBP13.94□□□□□ -0.18
FN1-217ENST00000471193 ANO2Q9NQ90 1003 aa13.94□□□□□ -0.18
FN1-217ENST00000471193 FOCADQ5VW36 1801 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 SHTN1A0MZ66 631 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 EPB41L2O43491 1005 aaKnown RBP13.93□□□□□ -0.18
FN1-217ENST00000471193 DDNO94850 711 aaPredicted RBP13.93□□□□□ -0.18
FN1-217ENST00000471193 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 GNAT2P19087 354 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 RHBDL3P58872 404 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 VPS53Q5VIR6 699 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 APOBEC3HQ6NTF7 200 aaKnown RBP13.93□□□□□ -0.18
FN1-217ENST00000471193 MICALL2Q8IY33 904 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 ZBED3Q96IU2 234 aaPredicted RBP13.93□□□□□ -0.18
FN1-217ENST00000471193 L3MBTL3Q96JM7 780 aaPredicted RBP13.93□□□□□ -0.18
FN1-217ENST00000471193 DSCC1Q9BVC3 393 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 GPRC5DQ9NZD1 345 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 PCDHAC2Q9Y5I4 1007 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 RPAP1Q9BWH6 1393 aaPredicted RBP13.93□□□□□ -0.18
FN1-217ENST00000471193 NAV1Q8NEY1 1877 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 WDR90Q96KV7 1748 aa13.93□□□□□ -0.18
FN1-217ENST00000471193 ECM29Q5VYK3 1845 aa13.92□□□□□ -0.18
FN1-217ENST00000471193 HSPD1P10809 573 aaKnown RBP13.92□□□□□ -0.18
FN1-217ENST00000471193 PLCG2P16885 1265 aa13.92□□□□□ -0.18
FN1-217ENST00000471193 PTH1RQ03431 593 aa13.92□□□□□ -0.18
FN1-217ENST00000471193 KIAA1211Q6ZU35 1233 aa13.92□□□□□ -0.18
FN1-217ENST00000471193 SH3RF3Q8TEJ3 882 aaPredicted RBP13.92□□□□□ -0.18
FN1-217ENST00000471193 CRNKL1Q9BZJ0 848 aaKnown RBP13.92□□□□□ -0.18
FN1-217ENST00000471193 EPB41L4AQ9HCS5 686 aaPredicted RBP13.92□□□□□ -0.18
FN1-217ENST00000471193 MYOZ2Q9NPC6 264 aa13.92□□□□□ -0.18
FN1-217ENST00000471193 CNOT7Q9UIV1 285 aaKnown RBP13.92□□□□□ -0.18
FN1-217ENST00000471193 CDK5RAP2Q96SN8 1893 aa13.92□□□□□ -0.18
FN1-217ENST00000471193 ZMYM6O95789 1325 aa13.91□□□□□ -0.18
FN1-217ENST00000471193 GLTPD2A6NH11 291 aa13.91□□□□□ -0.18
FN1-217ENST00000471193 PRKAB2O43741 272 aa13.91□□□□□ -0.18
FN1-217ENST00000471193 RBM5P52756 815 aaKnown RBP eCLIP13.91□□□□□ -0.18
FN1-217ENST00000471193 DLGAP5Q15398 846 aa13.91□□□□□ -0.18
FN1-217ENST00000471193 DPY19L2Q6NUT2 758 aa13.91□□□□□ -0.18
FN1-217ENST00000471193 CDC42EP5Q6NZY7 148 aa13.91□□□□□ -0.18
FN1-217ENST00000471193 SLC4A4Q9Y6R1 1079 aa13.91□□□□□ -0.18
FN1-217ENST00000471193 LAMA4Q16363 1823 aa13.91□□□□□ -0.18
FN1-217ENST00000471193 LAMB1P07942 1786 aa13.91□□□□□ -0.18
FN1-217ENST00000471193 GSG1L2A8MUP6 293 aa13.9□□□□□ -0.18
FN1-217ENST00000471193 EGFRP00533 1210 aa13.9□□□□□ -0.18
FN1-217ENST00000471193 KIF4BQ2VIQ3 1234 aa13.9□□□□□ -0.18
FN1-217ENST00000471193 TEX11Q8IYF3 940 aa13.9□□□□□ -0.18
FN1-217ENST00000471193 SDR42E1Q8WUS8 393 aa13.9□□□□□ -0.18
FN1-217ENST00000471193 MAP4K1Q92918 833 aa13.9□□□□□ -0.18
FN1-217ENST00000471193 PRMT6Q96LA8 375 aaPredicted RBP13.9□□□□□ -0.18
FN1-217ENST00000471193 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
FN1-217ENST00000471193 PATL2C9JE40 543 aaKnown RBP13.89□□□□□ -0.19
FN1-217ENST00000471193 H7C1D1 291 aa13.89□□□□□ -0.19
FN1-217ENST00000471193 WNT10BO00744 389 aa13.89□□□□□ -0.19
FN1-217ENST00000471193 WDHD1O75717 1129 aaPredicted RBP13.89□□□□□ -0.19
FN1-217ENST00000471193 LMOD1P29536 600 aaPredicted RBP13.89□□□□□ -0.19
FN1-217ENST00000471193 EPS15P42566 896 aa13.89□□□□□ -0.19
FN1-217ENST00000471193 ALX1Q15699 326 aa13.89□□□□□ -0.19
FN1-217ENST00000471193 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
FN1-217ENST00000471193 GIMAP6Q6P9H5 292 aa13.89□□□□□ -0.19
FN1-217ENST00000471193 UPF2Q9HAU5 1272 aaKnown RBP13.89□□□□□ -0.19
FN1-217ENST00000471193 ATP8A2Q9NTI2 1148 aa13.89□□□□□ -0.19
FN1-217ENST00000471193 USP40Q9NVE5 1235 aa13.89□□□□□ -0.19
FN1-217ENST00000471193 MKRN1Q9UHC7 482 aaKnown RBP13.89□□□□□ -0.19
FN1-217ENST00000471193 RBM8AQ9Y5S9 174 aaKnown RBP13.89□□□□□ -0.19
FN1-217ENST00000471193 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
FN1-217ENST00000471193 FLT1P17948 1338 aa13.89□□□□□ -0.19
FN1-217ENST00000471193 COL2A1P02458 1487 aaPredicted RBP13.88□□□□□ -0.19
FN1-217ENST00000471193 SCN4AP35499 1836 aa13.88□□□□□ -0.19
FN1-217ENST00000471193 USP5P45974 858 aa13.88□□□□□ -0.19
FN1-217ENST00000471193 TBC1D10BQ4KMP7 808 aaPredicted RBP13.88□□□□□ -0.19
FN1-217ENST00000471193 SAMD7Q7Z3H4 446 aa13.88□□□□□ -0.19
FN1-217ENST00000471193 IFNL3Q8IZI9 196 aa13.88□□□□□ -0.19
FN1-217ENST00000471193 TRPM4Q8TD43 1214 aa13.88□□□□□ -0.19
FN1-217ENST00000471193 IDI2Q9BXS1 227 aa13.88□□□□□ -0.19
FN1-217ENST00000471193 NACAP1Q9BZK3 213 aa13.88□□□□□ -0.19
FN1-217ENST00000471193 TDRD3Q9H7E2 651 aaKnown RBP13.88□□□□□ -0.19
FN1-217ENST00000471193 DCP1AQ9NPI6 582 aaPredicted RBP13.88□□□□□ -0.19
FN1-217ENST00000471193 ADARB2Q9NS39 739 aaKnown RBP13.88□□□□□ -0.19
FN1-217ENST00000471193 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
FN1-217ENST00000471193 FGAP02671 866 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 APPP05067 770 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 HSPA4P34932 840 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 TDO2P48775 406 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 NFIAQ12857 509 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 NECTIN1Q15223 517 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 NBPF9Q3BBW0 867 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 MAPKAPK5Q8IW41 473 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 TGFBRAP1Q8WUH2 860 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 NAPBQ9H115 298 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 DDX4Q9NQI0 724 aaKnown RBP13.87□□□□□ -0.19
FN1-217ENST00000471193 ZNF70Q9UC06 446 aaPredicted RBP13.87□□□□□ -0.19
FN1-217ENST00000471193 HACL1Q9UJ83 578 aa13.87□□□□□ -0.19
FN1-217ENST00000471193 CLRN2A0PK11 232 aa13.86□□□□□ -0.19
FN1-217ENST00000471193 MYO1BO43795 1136 aa13.86□□□□□ -0.19
FN1-217ENST00000471193 CACNB3P54284 484 aa13.86□□□□□ -0.19
FN1-217ENST00000471193 PICALMQ13492 652 aa13.86□□□□□ -0.19
FN1-217ENST00000471193 RBM26Q5T8P6 1007 aaKnown RBP13.86□□□□□ -0.19
FN1-217ENST00000471193 DDRGK1Q96HY6 314 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms