RNA–Protein interactions for RNA: ENST00000471158.1

RFT1-204, Transcript of RFT1 homolog, humanhuman

TSL 3

Gene RFT1, Length 924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-204ENST00000471158 ZNF384Q8TF68 577 aa14.27□□□□□ -0.13
RFT1-204ENST00000471158 FBXW7Q969H0 707 aa14.27□□□□□ -0.13
RFT1-204ENST00000471158 CWC22Q9HCG8 908 aaKnown RBP14.27□□□□□ -0.13
RFT1-204ENST00000471158 SH2B1Q9NRF2 756 aaPredicted RBP14.27□□□□□ -0.13
RFT1-204ENST00000471158 MROH7-TTC4A0A0A0MT08 1334 aa14.26□□□□□ -0.13
RFT1-204ENST00000471158 WDR19Q8NEZ3 1342 aa14.26□□□□□ -0.13
RFT1-204ENST00000471158 PPIP5K2O43314 1243 aa14.26□□□□□ -0.13
RFT1-204ENST00000471158 ECE2O60344 883 aa14.26□□□□□ -0.13
RFT1-204ENST00000471158 RALYLQ86SE5 291 aaKnown RBP14.26□□□□□ -0.13
RFT1-204ENST00000471158 CHMP4CQ96CF2 233 aa14.26□□□□□ -0.13
RFT1-204ENST00000471158 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
RFT1-204ENST00000471158 TMX3Q96JJ7 454 aa14.26□□□□□ -0.13
RFT1-204ENST00000471158 RNF41Q9H4P4 317 aaPredicted RBP14.26□□□□□ -0.13
RFT1-204ENST00000471158 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
RFT1-204ENST00000471158 SPON1Q9HCB6 807 aa14.26□□□□□ -0.13
RFT1-204ENST00000471158 AATFQ9NY61 560 aaKnown RBP eCLIP14.26□□□□□ -0.13
RFT1-204ENST00000471158 PPP1R1BQ9UD71 204 aaPredicted RBP14.26□□□□□ -0.13
RFT1-204ENST00000471158 CIZ1Q9ULV3 898 aaPredicted RBP14.26□□□□□ -0.13
RFT1-204ENST00000471158 GPR75-ASB3A0A0A6YYF3 556 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 USP17L3A6NCW0 530 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 USP17L4A6NCW7 530 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 PCP11498 1178 aaKnown RBP14.25□□□□□ -0.13
RFT1-204ENST00000471158 PTGER2P43116 358 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 NT5C2P49902 561 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 HAND2P61296 217 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 DYNLL1P63167 89 aaKnown RBP14.25□□□□□ -0.13
RFT1-204ENST00000471158 FGD1P98174 961 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 CUL4AQ13619 759 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 USP17L1Q7RTZ2 530 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 MRIQ9BWK5 157 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 DBNDD1Q9H9R9 158 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 LAMA4Q16363 1823 aa14.25□□□□□ -0.13
RFT1-204ENST00000471158 GAKO14976 1311 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 PRKAB2O43741 272 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 SLC3A2P08195 630 aaKnown RBP14.24□□□□□ -0.13
RFT1-204ENST00000471158 MCM5P33992 734 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 AOC3Q16853 763 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 STOX1Q6ZVD7 989 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 AMOTL1Q8IY63 956 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 FBXL16Q8N461 479 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 KRT23Q9C075 422 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 EPB41L4AQ9HCS5 686 aaPredicted RBP14.24□□□□□ -0.13
RFT1-204ENST00000471158 CHMP5Q9NZZ3 219 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 ANAPC4Q9UJX5 808 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 TAF6LQ9Y6J9 622 aa14.24□□□□□ -0.13
RFT1-204ENST00000471158 CPA1P15085 419 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 USP5P45974 858 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 HDLBPQ00341 1268 aaKnown RBP14.23□□□□□ -0.13
RFT1-204ENST00000471158 EXOSC10Q01780 885 aaKnown RBP14.23□□□□□ -0.13
RFT1-204ENST00000471158 PPARAQ07869 468 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 AKNAD1Q5T1N1 836 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 MFSD6Q6ZSS7 791 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 LARGE2Q8N3Y3 721 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 SPRYD3Q8NCJ5 442 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 SDR42E1Q8WUS8 393 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 STAG1Q8WVM7 1258 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 SLKQ9H2G2 1235 aaPredicted RBP14.23□□□□□ -0.13
RFT1-204ENST00000471158 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
RFT1-204ENST00000471158 ARPP21Q9UBL0 812 aaPredicted RBP14.23□□□□□ -0.13
RFT1-204ENST00000471158 TTF2Q9UNY4 1162 aaKnown RBP14.23□□□□□ -0.13
RFT1-204ENST00000471158 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.23□□□□□ -0.13
RFT1-204ENST00000471158 CHD4Q14839 1912 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 MYH2Q9UKX2 1941 aa14.23□□□□□ -0.13
RFT1-204ENST00000471158 MYO3BQ8WXR4 1341 aa14.22□□□□□ -0.13
RFT1-204ENST00000471158 BTDP43251 543 aa14.22□□□□□ -0.13
RFT1-204ENST00000471158 DIXDC1Q155Q3 683 aa14.22□□□□□ -0.13
RFT1-204ENST00000471158 SBK1Q52WX2 424 aa14.22□□□□□ -0.13
RFT1-204ENST00000471158 HHIPL2Q6UWX4 724 aa14.22□□□□□ -0.13
RFT1-204ENST00000471158 Q6ZUG5 572 aa14.22□□□□□ -0.13
RFT1-204ENST00000471158 NOL8Q76FK4 1167 aaKnown RBP14.22□□□□□ -0.13
RFT1-204ENST00000471158 TEKT1Q969V4 418 aa14.22□□□□□ -0.13
RFT1-204ENST00000471158 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
RFT1-204ENST00000471158 TAOK3Q9H2K8 898 aa14.22□□□□□ -0.13
RFT1-204ENST00000471158 DCP1AQ9NPI6 582 aaPredicted RBP14.22□□□□□ -0.13
RFT1-204ENST00000471158 MINDY4BA8MYZ0 360 aa14.21□□□□□ -0.13
RFT1-204ENST00000471158 GRIK5Q16478 980 aa14.21□□□□□ -0.13
RFT1-204ENST00000471158 DACT2Q5SW24 774 aa14.21□□□□□ -0.13
RFT1-204ENST00000471158 TBC1D10CQ8IV04 446 aa14.21□□□□□ -0.13
RFT1-204ENST00000471158 NIM1KQ8IY84 436 aa14.21□□□□□ -0.13
RFT1-204ENST00000471158 MB21D2Q8IYB1 491 aaPredicted RBP14.21□□□□□ -0.13
RFT1-204ENST00000471158 CNKSR2Q8WXI2 1034 aa14.21□□□□□ -0.13
RFT1-204ENST00000471158 TIAM2Q8IVF5 1701 aa14.21□□□□□ -0.14
RFT1-204ENST00000471158 BRCA1P38398 1863 aaKnown RBP14.21□□□□□ -0.14
RFT1-204ENST00000471158 PRC1O43663 620 aa14.2□□□□□ -0.14
RFT1-204ENST00000471158 IARSP41252 1262 aaKnown RBP14.2□□□□□ -0.14
RFT1-204ENST00000471158 TOB2Q14106 344 aaPredicted RBP14.2□□□□□ -0.14
RFT1-204ENST00000471158 SART3Q15020 963 aaKnown RBP14.2□□□□□ -0.14
RFT1-204ENST00000471158 CTR9Q6PD62 1173 aa14.2□□□□□ -0.14
RFT1-204ENST00000471158 TEX11Q8IYF3 940 aa14.2□□□□□ -0.14
RFT1-204ENST00000471158 CERS5Q8N5B7 392 aa14.2□□□□□ -0.14
RFT1-204ENST00000471158 SH3RF3Q8TEJ3 882 aaPredicted RBP14.2□□□□□ -0.14
RFT1-204ENST00000471158 TMEM87BQ96K49 555 aa14.2□□□□□ -0.14
RFT1-204ENST00000471158 AGXT2Q9BYV1 514 aa14.2□□□□□ -0.14
RFT1-204ENST00000471158 NBPF3Q9H094 633 aa14.2□□□□□ -0.14
RFT1-204ENST00000471158 ZNF277Q9NRM2 450 aaPredicted RBP14.2□□□□□ -0.14
RFT1-204ENST00000471158 ZNRF3Q9ULT6 936 aa14.2□□□□□ -0.14
RFT1-204ENST00000471158 LTBP3Q9NS15 1303 aa14.19□□□□□ -0.14
RFT1-204ENST00000471158 USP17L12C9JPN9 530 aa14.19□□□□□ -0.14
RFT1-204ENST00000471158 USP17L21D6R901 530 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms