RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 TMC7Q7Z402 723 aa6.2□□□□□ -1.42
HERC3-208ENST00000470815 CCNJLQ8IV13 435 aa6.2□□□□□ -1.42
HERC3-208ENST00000470815 ASB16Q96NS5 453 aa6.2□□□□□ -1.42
HERC3-208ENST00000470815 DNAJC25Q9H1X3 360 aa6.2□□□□□ -1.42
HERC3-208ENST00000470815 ZC3H7BQ9UGR2 993 aaKnown RBP6.2□□□□□ -1.42
HERC3-208ENST00000470815 SYNGAP1Q96PV0 1343 aa6.2□□□□□ -1.42
HERC3-208ENST00000470815 A0A096LPE4 126 aa6.19□□□□□ -1.42
HERC3-208ENST00000470815 A0A1W2PPZ6 126 aa6.19□□□□□ -1.42
HERC3-208ENST00000470815 NFICP08651 508 aa6.19□□□□□ -1.42
HERC3-208ENST00000470815 POU4F3Q15319 338 aa6.19□□□□□ -1.42
HERC3-208ENST00000470815 SEZ6L2Q6UXD5 910 aa6.19□□□□□ -1.42
HERC3-208ENST00000470815 ZNF765Q7L2R6 523 aa6.19□□□□□ -1.42
HERC3-208ENST00000470815 ZSCAN29Q8IWY8 852 aaPredicted RBP6.19□□□□□ -1.42
HERC3-208ENST00000470815 STK11IPQ8N1F8 1099 aa6.19□□□□□ -1.42
HERC3-208ENST00000470815 PAPLNO95428 1278 aa6.18□□□□□ -1.42
HERC3-208ENST00000470815 CTSBP07858 339 aa6.18□□□□□ -1.42
HERC3-208ENST00000470815 RAB6AP20340 208 aa6.18□□□□□ -1.42
HERC3-208ENST00000470815 MAPK1P28482 360 aa6.18□□□□□ -1.42
HERC3-208ENST00000470815 ZNF423Q2M1K9 1284 aa6.18□□□□□ -1.42
HERC3-208ENST00000470815 GALNT12Q8IXK2 581 aa6.18□□□□□ -1.42
HERC3-208ENST00000470815 DDX54Q8TDD1 881 aaKnown RBP6.18□□□□□ -1.42
HERC3-208ENST00000470815 TCF12Q99081 682 aa6.18□□□□□ -1.42
HERC3-208ENST00000470815 FAM105AQ9NUU6 356 aa6.18□□□□□ -1.42
HERC3-208ENST00000470815 A0A1W2PP55 124 aa6.17□□□□□ -1.42
HERC3-208ENST00000470815 B3GALT4O96024 378 aa6.17□□□□□ -1.42
HERC3-208ENST00000470815 DYMQ7RTS9 669 aa6.17□□□□□ -1.42
HERC3-208ENST00000470815 BCL7CQ8WUZ0 217 aaPredicted RBP6.17□□□□□ -1.42
HERC3-208ENST00000470815 MISP3Q96FF7 219 aa6.17□□□□□ -1.42
HERC3-208ENST00000470815 TRIM56Q9BRZ2 755 aaKnown RBP6.17□□□□□ -1.42
HERC3-208ENST00000470815 LIN7BQ9HAP6 207 aa6.17□□□□□ -1.42
HERC3-208ENST00000470815 LRRC4CQ9HCJ2 640 aa6.17□□□□□ -1.42
HERC3-208ENST00000470815 C1GALT1Q9NS00 363 aa6.17□□□□□ -1.42
HERC3-208ENST00000470815 SLC5A6Q9Y289 635 aa6.17□□□□□ -1.42
HERC3-208ENST00000470815 ZBTB7CA1YPR0 619 aa6.16□□□□□ -1.42
HERC3-208ENST00000470815 CPNE3O75131 537 aaKnown RBP6.16□□□□□ -1.42
HERC3-208ENST00000470815 GRIA4P48058 902 aa6.16□□□□□ -1.42
HERC3-208ENST00000470815 FMR1Q06787 632 aaKnown RBP eCLIP6.16□□□□□ -1.42
HERC3-208ENST00000470815 AKAP4Q5JQC9 854 aa6.16□□□□□ -1.42
HERC3-208ENST00000470815 OGFOD3Q6PK18 319 aa6.16□□□□□ -1.42
HERC3-208ENST00000470815 WFDC3Q8IUB2 231 aa6.16□□□□□ -1.42
HERC3-208ENST00000470815 CSRNP1Q96S65 589 aa6.16□□□□□ -1.42
HERC3-208ENST00000470815 CORO1BQ9BR76 489 aa6.16□□□□□ -1.42
HERC3-208ENST00000470815 GZF1Q9H116 711 aaPredicted RBP6.16□□□□□ -1.42
HERC3-208ENST00000470815 RAD18Q9NS91 495 aa6.16□□□□□ -1.42
HERC3-208ENST00000470815 AP4E1Q9UPM8 1137 aa6.16□□□□□ -1.42
HERC3-208ENST00000470815 BIN1O00499 593 aa6.15□□□□□ -1.42
HERC3-208ENST00000470815 ASPAP45381 313 aa6.15□□□□□ -1.42
HERC3-208ENST00000470815 ORC1Q13415 861 aa6.15□□□□□ -1.42
HERC3-208ENST00000470815 SPRED3Q2MJR0 410 aa6.15□□□□□ -1.42
HERC3-208ENST00000470815 DNAJC14Q6Y2X3 702 aaPredicted RBP6.15□□□□□ -1.42
HERC3-208ENST00000470815 NIF3L1Q9GZT8 377 aa6.15□□□□□ -1.42
HERC3-208ENST00000470815 EIF1AYO14602 144 aaKnown RBP6.14□□□□□ -1.43
HERC3-208ENST00000470815 POLR3DP05423 398 aaPredicted RBP6.14□□□□□ -1.43
HERC3-208ENST00000470815 ERCC3P19447 782 aa6.14□□□□□ -1.43
HERC3-208ENST00000470815 ITPKAP23677 461 aa6.14□□□□□ -1.43
HERC3-208ENST00000470815 PLCB3Q01970 1234 aa6.14□□□□□ -1.43
HERC3-208ENST00000470815 PLCL1Q15111 1095 aa6.14□□□□□ -1.43
HERC3-208ENST00000470815 ENOX2Q16206 610 aaKnown RBP6.14□□□□□ -1.43
HERC3-208ENST00000470815 CYP27C1Q4G0S4 372 aa6.14□□□□□ -1.43
HERC3-208ENST00000470815 KIAA0319Q5VV43 1072 aa6.14□□□□□ -1.43
HERC3-208ENST00000470815 TMC1Q8TDI8 760 aa6.14□□□□□ -1.43
HERC3-208ENST00000470815 ZNF576Q9H609 170 aa6.14□□□□□ -1.43
HERC3-208ENST00000470815 DYNC1LI2O43237 492 aaPredicted RBP6.13□□□□□ -1.43
HERC3-208ENST00000470815 AOC2O75106 756 aa6.13□□□□□ -1.43
HERC3-208ENST00000470815 PTPN12Q05209 780 aaKnown RBP6.13□□□□□ -1.43
HERC3-208ENST00000470815 AP3B2Q13367 1082 aa6.13□□□□□ -1.43
HERC3-208ENST00000470815 CCDC27Q2M243 656 aa6.13□□□□□ -1.43
HERC3-208ENST00000470815 ZNF792Q3KQV3 632 aa6.13□□□□□ -1.43
HERC3-208ENST00000470815 FBF1Q8TES7 1133 aa6.13□□□□□ -1.43
HERC3-208ENST00000470815 WDR18Q9BV38 432 aa6.13□□□□□ -1.43
HERC3-208ENST00000470815 DAGLAQ9Y4D2 1042 aa6.13□□□□□ -1.43
HERC3-208ENST00000470815 ECEL1O95672 775 aa6.12□□□□□ -1.43
HERC3-208ENST00000470815 USPL1Q5W0Q7 1092 aa6.12□□□□□ -1.43
HERC3-208ENST00000470815 ZNF574Q6ZN55 896 aaPredicted RBP6.12□□□□□ -1.43
HERC3-208ENST00000470815 SPRED2Q7Z698 418 aa6.12□□□□□ -1.43
HERC3-208ENST00000470815 ATG4DQ86TL0 474 aaPredicted RBP6.12□□□□□ -1.43
HERC3-208ENST00000470815 CCDC74AQ96AQ1 378 aa6.12□□□□□ -1.43
HERC3-208ENST00000470815 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.12□□□□□ -1.43
HERC3-208ENST00000470815 CARMIL2Q6F5E8 1435 aa6.11□□□□□ -1.43
HERC3-208ENST00000470815 FUT4P22083 530 aa6.11□□□□□ -1.43
HERC3-208ENST00000470815 PRPF40BQ6NWY9 871 aaKnown RBP6.11□□□□□ -1.43
HERC3-208ENST00000470815 NPAS4Q8IUM7 802 aa6.11□□□□□ -1.43
HERC3-208ENST00000470815 NETO1Q8TDF5 533 aa6.11□□□□□ -1.43
HERC3-208ENST00000470815 KRTAP4-9Q9BYQ8 210 aa6.11□□□□□ -1.43
HERC3-208ENST00000470815 ANKRD33BA6NCL7 494 aa6.1□□□□□ -1.43
HERC3-208ENST00000470815 TMPRSS2O15393 492 aa6.1□□□□□ -1.43
HERC3-208ENST00000470815 PDE3AQ14432 1141 aa6.1□□□□□ -1.43
HERC3-208ENST00000470815 RPS26P11Q5JNZ5 115 aaPredicted RBP6.1□□□□□ -1.43
HERC3-208ENST00000470815 MKNK2Q9HBH9 465 aa6.1□□□□□ -1.43
HERC3-208ENST00000470815 CRIM1Q9NZV1 1036 aa6.1□□□□□ -1.43
HERC3-208ENST00000470815 PPP1R9AQ9ULJ8 1098 aa6.1□□□□□ -1.43
HERC3-208ENST00000470815 PNMA6FA0A0J9YX94 578 aa6.09□□□□□ -1.43
HERC3-208ENST00000470815 P4HBP07237 508 aaKnown RBP6.09□□□□□ -1.43
HERC3-208ENST00000470815 FGD1P98174 961 aa6.09□□□□□ -1.43
HERC3-208ENST00000470815 HNRNPUQ00839 825 aaKnown RBP eCLIP6.09□□□□□ -1.43
HERC3-208ENST00000470815 ZNF648Q5T619 568 aaPredicted RBP6.09□□□□□ -1.43
HERC3-208ENST00000470815 ALG1LQ6GMV1 187 aa6.09□□□□□ -1.43
HERC3-208ENST00000470815 GLIS3Q8NEA6 775 aa6.09□□□□□ -1.43
HERC3-208ENST00000470815 EHD4Q9H223 541 aa6.09□□□□□ -1.43
HERC3-208ENST00000470815 ATXN3LQ9H3M9 355 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms