RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 ANKRD24Q8TF21 1146 aa7.19□□□□□ -1.26
COL9A1-206ENST00000470652 UTP4Q969X6 686 aaKnown RBP7.19□□□□□ -1.26
COL9A1-206ENST00000470652 MYRFLQ96LU7 910 aa7.19□□□□□ -1.26
COL9A1-206ENST00000470652 AK5Q9Y6K8 562 aa7.19□□□□□ -1.26
COL9A1-206ENST00000470652 KIAA1324LA8MWY0 1029 aaPredicted RBP7.18□□□□□ -1.26
COL9A1-206ENST00000470652 USP17L7P0C7H9 530 aa7.18□□□□□ -1.26
COL9A1-206ENST00000470652 HNRNPUQ00839 825 aaKnown RBP eCLIP7.18□□□□□ -1.26
COL9A1-206ENST00000470652 ARMC10Q8N2F6 343 aa7.18□□□□□ -1.26
COL9A1-206ENST00000470652 RAD18Q9NS91 495 aa7.18□□□□□ -1.26
COL9A1-206ENST00000470652 PARP2Q9UGN5 583 aa7.18□□□□□ -1.26
COL9A1-206ENST00000470652 HIF3AQ9Y2N7 669 aa7.18□□□□□ -1.26
COL9A1-206ENST00000470652 GAS2O43903 313 aaKnown RBP7.17□□□□□ -1.26
COL9A1-206ENST00000470652 TIAF1O95411 115 aa7.17□□□□□ -1.26
COL9A1-206ENST00000470652 ECEL1O95672 775 aa7.17□□□□□ -1.26
COL9A1-206ENST00000470652 CTSBP07858 339 aa7.17□□□□□ -1.26
COL9A1-206ENST00000470652 XPCQ01831 940 aaPredicted RBP7.17□□□□□ -1.26
COL9A1-206ENST00000470652 TPTE2Q6XPS3 522 aa7.17□□□□□ -1.26
COL9A1-206ENST00000470652 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.17□□□□□ -1.26
COL9A1-206ENST00000470652 NECAB3Q96P71 396 aaPredicted RBP7.17□□□□□ -1.26
COL9A1-206ENST00000470652 RNF114Q9Y508 228 aa7.17□□□□□ -1.26
COL9A1-206ENST00000470652 SAMM50Q9Y512 469 aa7.17□□□□□ -1.26
COL9A1-206ENST00000470652 ADAMTS4O75173 837 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 GSTP1P09211 210 aaKnown RBP7.16□□□□□ -1.26
COL9A1-206ENST00000470652 BMP3P12645 472 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 NME2P22392 152 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 ARNTP27540 789 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 GRIK1P39086 918 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 PREPP48147 710 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 DAB2P98082 770 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 SOX4Q06945 474 aaPredicted RBP7.16□□□□□ -1.26
COL9A1-206ENST00000470652 NFIAQ12857 509 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 PDE3AQ14432 1141 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 ZDHHC13Q8IUH4 622 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 SULF2Q8IWU5 870 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 TRIM42Q8IWZ5 723 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 EMILIN2Q9BXX0 1053 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 SYNGAP1Q96PV0 1343 aa7.16□□□□□ -1.26
COL9A1-206ENST00000470652 DRD2P14416 443 aa7.15□□□□□ -1.26
COL9A1-206ENST00000470652 ITGAEP38570 1179 aa7.15□□□□□ -1.26
COL9A1-206ENST00000470652 PSMD2Q13200 908 aa7.15□□□□□ -1.26
COL9A1-206ENST00000470652 INTS5Q6P9B9 1019 aaKnown RBP7.15□□□□□ -1.26
COL9A1-206ENST00000470652 TMC4Q7Z404 712 aa7.15□□□□□ -1.26
COL9A1-206ENST00000470652 CLEC10AQ8IUN9 316 aa7.15□□□□□ -1.26
COL9A1-206ENST00000470652 FAM20CQ8IXL6 584 aa7.15□□□□□ -1.26
COL9A1-206ENST00000470652 KRT82Q9NSB4 513 aa7.15□□□□□ -1.26
COL9A1-206ENST00000470652 RNF19AQ9NV58 838 aa7.15□□□□□ -1.26
COL9A1-206ENST00000470652 HMX2A2RU54 273 aa7.14□□□□□ -1.27
COL9A1-206ENST00000470652 ENC1O14682 589 aa7.14□□□□□ -1.27
COL9A1-206ENST00000470652 AOC2O75106 756 aa7.14□□□□□ -1.27
COL9A1-206ENST00000470652 SLFN14P0C7P3 912 aa7.14□□□□□ -1.27
COL9A1-206ENST00000470652 ADH5P11766 374 aa7.14□□□□□ -1.27
COL9A1-206ENST00000470652 USP11P51784 963 aa7.14□□□□□ -1.27
COL9A1-206ENST00000470652 PDZD3Q86UT5 571 aa7.14□□□□□ -1.27
COL9A1-206ENST00000470652 ZC3H12CQ9C0D7 883 aaKnown RBP7.14□□□□□ -1.27
COL9A1-206ENST00000470652 KCNF1Q9H3M0 494 aa7.14□□□□□ -1.27
COL9A1-206ENST00000470652 CCDC86Q9H6F5 360 aaKnown RBP7.14□□□□□ -1.27
COL9A1-206ENST00000470652 C7orf69Q9H7B7 122 aa7.14□□□□□ -1.27
COL9A1-206ENST00000470652 FBXO24O75426 580 aa7.13□□□□□ -1.27
COL9A1-206ENST00000470652 ZNF326Q5BKZ1 582 aaKnown RBP7.13□□□□□ -1.27
COL9A1-206ENST00000470652 AKAP4Q5JQC9 854 aa7.13□□□□□ -1.27
COL9A1-206ENST00000470652 RNF43Q68DV7 783 aa7.13□□□□□ -1.27
COL9A1-206ENST00000470652 BEND4Q6ZU67 534 aa7.13□□□□□ -1.27
COL9A1-206ENST00000470652 SV2BQ7L1I2 683 aa7.13□□□□□ -1.27
COL9A1-206ENST00000470652 C2CD4AQ8NCU7 369 aaPredicted RBP7.13□□□□□ -1.27
COL9A1-206ENST00000470652 KCNB2Q92953 911 aa7.13□□□□□ -1.27
COL9A1-206ENST00000470652 FAM83CQ9BQN1 747 aa7.13□□□□□ -1.27
COL9A1-206ENST00000470652 WDR18Q9BV38 432 aa7.13□□□□□ -1.27
COL9A1-206ENST00000470652 BCL2L13Q9BXK5 485 aa7.13□□□□□ -1.27
COL9A1-206ENST00000470652 CBX8Q9HC52 389 aa7.13□□□□□ -1.27
COL9A1-206ENST00000470652 TTF2Q9UNY4 1162 aaKnown RBP7.13□□□□□ -1.27
COL9A1-206ENST00000470652 SORBS3O60504 671 aa7.12□□□□□ -1.27
COL9A1-206ENST00000470652 WNT11O96014 354 aa7.12□□□□□ -1.27
COL9A1-206ENST00000470652 LIG1P18858 919 aa7.12□□□□□ -1.27
COL9A1-206ENST00000470652 MAP4P27816 1152 aaKnown RBP7.12□□□□□ -1.27
COL9A1-206ENST00000470652 LRRC14Q15048 493 aa7.12□□□□□ -1.27
COL9A1-206ENST00000470652 STK35Q8TDR2 534 aa7.12□□□□□ -1.27
COL9A1-206ENST00000470652 DBNDD2Q9BQY9 259 aa7.12□□□□□ -1.27
COL9A1-206ENST00000470652 YIPF2Q9BWQ6 316 aa7.12□□□□□ -1.27
COL9A1-206ENST00000470652 MRS2Q9HD23 443 aa7.12□□□□□ -1.27
COL9A1-206ENST00000470652 CYP8B1Q9UNU6 501 aa7.12□□□□□ -1.27
COL9A1-206ENST00000470652 PRR19A6NJB7 356 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 ZNF862O60290 1169 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 PAGE1O75459 146 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 SPINK2P20155 84 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 BMP6P22004 513 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 RXRBP28702 533 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 MFAP1P55081 439 aaKnown RBP7.11□□□□□ -1.27
COL9A1-206ENST00000470652 TAGLNQ01995 201 aaKnown RBP7.11□□□□□ -1.27
COL9A1-206ENST00000470652 ZNF252P-AS1Q0IIN9 211 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 TRIM26Q12899 539 aaPredicted RBP7.11□□□□□ -1.27
COL9A1-206ENST00000470652 KIF4BQ2VIQ3 1234 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 SGO2Q562F6 1265 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 MAP1SQ66K74 1059 aaPredicted RBP7.11□□□□□ -1.27
COL9A1-206ENST00000470652 SCARA3Q6AZY7 606 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 DYMQ7RTS9 669 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 WDR89Q96FK6 387 aaPredicted RBP7.11□□□□□ -1.27
COL9A1-206ENST00000470652 FAM161BQ96MY7 647 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 BCL11AQ9H165 835 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 AP4E1Q9UPM8 1137 aa7.11□□□□□ -1.27
COL9A1-206ENST00000470652 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms