RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 SALL1Q9NSC2 1324 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 MYH13Q9UKX3 1938 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 KLF18A0A0U1RQI7 1052 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 BBOX1O75936 387 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 CRAMP1Q96RY5 1269 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 CNNM2Q9H8M5 875 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 NCOA5Q9HCD5 579 aaKnown RBP19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 EPB41L4AQ9HCS5 686 aaPredicted RBP19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 ANKIB1Q9P2G1 1089 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 SLC4A4Q9Y6R1 1079 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 ANKRD31Q8N7Z5 1873 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 XDHP47989 1333 aa19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 SYCE3A1L190 88 aa19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 HOXA10P31260 410 aaPredicted RBP19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 PDE6BP35913 854 aa19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 CCDC183Q5T5S1 534 aa19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 LCORLQ8N3X6 602 aa19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 ANO8Q9HCE9 1232 aaPredicted RBP19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 RAI14Q9P0K7 980 aa19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 ABCF2Q9UG63 623 aa19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 ANGEL1Q9UNK9 670 aaKnown RBP19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 IQSEC3Q9UPP2 1182 aaPredicted RBP19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 LEMD3Q9Y2U8 911 aa19.87■□□□□ 0.77
SMARCD3-206ENST00000470588 KLRG2A4D1S0 409 aaPredicted RBP19.86■□□□□ 0.77
SMARCD3-206ENST00000470588 WTIPA6NIX2 430 aaPredicted RBP19.86■□□□□ 0.77
SMARCD3-206ENST00000470588 HIBADHP31937 336 aaKnown RBP19.86■□□□□ 0.77
SMARCD3-206ENST00000470588 NASPP49321 788 aaPredicted RBP19.86■□□□□ 0.77
SMARCD3-206ENST00000470588 TMED8Q6PL24 325 aaPredicted RBP19.86■□□□□ 0.77
SMARCD3-206ENST00000470588 CYB5R4Q7L1T6 521 aa19.86■□□□□ 0.77
SMARCD3-206ENST00000470588 KRT23Q9C075 422 aa19.86■□□□□ 0.77
SMARCD3-206ENST00000470588 MAGEB6P1A0A0J9YX57 407 aa19.85■□□□□ 0.77
SMARCD3-206ENST00000470588 MSL1Q68DK7 614 aa19.85■□□□□ 0.77
SMARCD3-206ENST00000470588 RGS22Q8NE09 1264 aa19.85■□□□□ 0.77
SMARCD3-206ENST00000470588 HPS5Q9UPZ3 1129 aa19.85■□□□□ 0.77
SMARCD3-206ENST00000470588 SH2B2O14492 632 aaPredicted RBP19.85■□□□□ 0.77
SMARCD3-206ENST00000470588 PRKAB2O43741 272 aa19.85■□□□□ 0.77
SMARCD3-206ENST00000470588 AKNAD1Q5T1N1 836 aa19.85■□□□□ 0.77
SMARCD3-206ENST00000470588 TTC6Q86TZ1 520 aa19.85■□□□□ 0.77
SMARCD3-206ENST00000470588 RBSNQ9H1K0 784 aa19.85■□□□□ 0.77
SMARCD3-206ENST00000470588 GOLGA8BA8MQT2 603 aa19.84■□□□□ 0.77
SMARCD3-206ENST00000470588 B4E1Z4 1266 aa19.84■□□□□ 0.77
SMARCD3-206ENST00000470588 TDO2P48775 406 aa19.84■□□□□ 0.77
SMARCD3-206ENST00000470588 ATL3Q6DD88 541 aa19.84■□□□□ 0.77
SMARCD3-206ENST00000470588 CCDC125Q86Z20 511 aa19.84■□□□□ 0.77
SMARCD3-206ENST00000470588 IGDCC4Q8TDY8 1250 aa19.84■□□□□ 0.77
SMARCD3-206ENST00000470588 ANP32BQ92688 251 aaKnown RBP19.84■□□□□ 0.77
SMARCD3-206ENST00000470588 CFAP45Q9UL16 551 aa19.84■□□□□ 0.77
SMARCD3-206ENST00000470588 IGSF3O75054 1194 aa19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 FDPSP14324 419 aaKnown RBP19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 NPR1P16066 1061 aa19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 FAM173BQ6P4H8 233 aa19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 MFSD6Q6ZSS7 791 aa19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 MIGA1Q8NAN2 632 aa19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 STAG1Q8WVM7 1258 aa19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 SPATA32Q96LK8 384 aa19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 MTA3Q9BTC8 594 aa19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 TSPY26PQ9H489 355 aa19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 TFIP11Q9UBB9 837 aaKnown RBP19.83■□□□□ 0.77
SMARCD3-206ENST00000470588 LIFRP42702 1097 aa19.83■□□□□ 0.76
SMARCD3-206ENST00000470588 CTDSPL2Q05D32 466 aa19.83■□□□□ 0.76
SMARCD3-206ENST00000470588 LEO1Q8WVC0 666 aaPredicted RBP19.83■□□□□ 0.76
SMARCD3-206ENST00000470588 RNF41Q9H4P4 317 aaPredicted RBP19.83■□□□□ 0.76
SMARCD3-206ENST00000470588 LRRC37AA6NMS7 1700 aa19.82■□□□□ 0.76
SMARCD3-206ENST00000470588 CPLX1O14810 134 aa19.82■□□□□ 0.76
SMARCD3-206ENST00000470588 ATP2B4P23634 1241 aa19.82■□□□□ 0.76
SMARCD3-206ENST00000470588 ALDH1B1P30837 517 aa19.82■□□□□ 0.76
SMARCD3-206ENST00000470588 DEFB132Q7Z7B7 95 aa19.82■□□□□ 0.76
SMARCD3-206ENST00000470588 SGMS1Q86VZ5 419 aa19.82■□□□□ 0.76
SMARCD3-206ENST00000470588 TMX4Q9H1E5 349 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-206ENST00000470588 ZSWIM5Q9P217 1185 aa19.82■□□□□ 0.76
SMARCD3-206ENST00000470588 ANAPC4Q9UJX5 808 aa19.82■□□□□ 0.76
SMARCD3-206ENST00000470588 NEDD4P46934 1319 aa19.82■□□□□ 0.76
SMARCD3-206ENST00000470588 COL1A1P02452 1464 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-206ENST00000470588 PPEF1O14829 653 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-206ENST00000470588 RIOK1Q9BRS2 568 aaKnown RBP19.81■□□□□ 0.76
SMARCD3-206ENST00000470588 ORC3Q9UBD5 711 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-206ENST00000470588 TMEM67Q5HYA8 995 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 GIMAP6Q6P9H5 292 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 CPLX2Q6PUV4 134 aaKnown RBP19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 ZNF804AQ7Z570 1209 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 ADGRA1Q86SQ6 560 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 ZNF396Q96N95 335 aaPredicted RBP19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 GGA1Q9UJY5 639 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 GOLGA6L4A6NEF3 574 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 CDKL5O76039 1030 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 SRGNP10124 158 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 KLRK1P26718 216 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 CCDC173Q0VFZ6 552 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 NKX2-3Q8TAU0 364 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 MASTLQ96GX5 879 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 PPP1R9BQ96SB3 815 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 LY9Q9HBG7 655 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 IRS2Q9Y4H2 1338 aa19.8■□□□□ 0.76
SMARCD3-206ENST00000470588 COL11A2P13942 1736 aaPredicted RBP19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 IFIT3O14879 490 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 KDM4AO75164 1064 aa19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 UFL1O94874 794 aa19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 ADD1P35611 737 aaKnown RBP19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 METAP2P50579 478 aaKnown RBP eCLIP19.79■□□□□ 0.76
SMARCD3-206ENST00000470588 GPSM2P81274 684 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms