RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 SASH1O94885 1247 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 ADH1CP00326 375 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 RBP3P10745 1247 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 PSMA3P25788 255 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 MSNP26038 577 aaKnown RBP5.95□□□□□ -1.46
COL3A1-205ENST00000470167 CYP2C19P33261 490 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 PIK3CAP42336 1068 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 TBC1D8BQ0IIM8 1120 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 BECN1Q14457 450 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 DDB1Q16531 1140 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 CLPPQ16740 277 aaPredicted RBP5.95□□□□□ -1.46
COL3A1-205ENST00000470167 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.95□□□□□ -1.46
COL3A1-205ENST00000470167 AGAP9Q5VTM2 703 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 TTC39BQ5VTQ0 682 aaPredicted RBP5.95□□□□□ -1.46
COL3A1-205ENST00000470167 SDE2Q6IQ49 451 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 AKNAQ7Z591 1439 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 SPATS2Q86XZ4 545 aaKnown RBP5.95□□□□□ -1.46
COL3A1-205ENST00000470167 SH3TC2Q8TF17 1288 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 ANKRD7Q92527 254 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 MIEF2Q96C03 454 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 FAM81BQ96LP2 452 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 GSDMAQ96QA5 445 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 BACH2Q9BYV9 841 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 ZHX3Q9H4I2 956 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 OSBPL3Q9H4L5 887 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 GRPEL1Q9HAV7 217 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 CD248Q9HCU0 757 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 TOMM22Q9NS69 142 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 ZNF358Q9NW07 568 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 C6orf203Q9P0P8 240 aaPredicted RBP5.95□□□□□ -1.46
COL3A1-205ENST00000470167 CXXC1Q9P0U4 656 aaPredicted RBP5.95□□□□□ -1.46
COL3A1-205ENST00000470167 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.95□□□□□ -1.46
COL3A1-205ENST00000470167 XPO7Q9UIA9 1087 aaKnown RBP5.95□□□□□ -1.46
COL3A1-205ENST00000470167 RNF123Q5XPI4 1314 aa5.95□□□□□ -1.46
COL3A1-205ENST00000470167 SCAPERQ9BY12 1400 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 SGSM2O43147 1006 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 ERLIN1O75477 346 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 RGS20O76081 388 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 CPP00450 1065 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 NR3C2P08235 984 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 IL4RP24394 825 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 RDXP35241 583 aaKnown RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 SLC19A1P41440 591 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 TSPAN7P41732 249 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 TRIM29Q14134 588 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 EIF4A2Q14240 407 aaKnown RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 SYCP1Q15431 976 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 TTC31Q49AM3 519 aaPredicted RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 SPDYCQ5MJ68 293 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 NAIF1Q69YI7 327 aaPredicted RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 FAAH2Q6GMR7 532 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 CCBE1Q6UXH8 406 aaPredicted RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 SDCCAG8Q86SQ7 713 aaPredicted RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 BRSK2Q8IWQ3 736 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 CCDC116Q8IYX3 515 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 ARL6IP6Q8N6S5 226 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 TRIM11Q96F44 468 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 DHTKD1Q96HY7 919 aaPredicted RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 RSRC1Q96IZ7 334 aaKnown RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 MRGPRX2Q96LB1 330 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 UTP14AQ9BVJ6 771 aaKnown RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 PDGFDQ9GZP0 370 aaPredicted RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 ESF1Q9H501 851 aaKnown RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 A1CFQ9NQ94 594 aaKnown RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 LMCD1Q9NZU5 365 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 CHMP5Q9NZZ3 219 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 POLKQ9UBT6 870 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 PCSK1NQ9UHG2 260 aa5.94□□□□□ -1.46
COL3A1-205ENST00000470167 SOS1Q07889 1333 aaPredicted RBP5.94□□□□□ -1.46
COL3A1-205ENST00000470167 ERCC6L2Q5T890 1561 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 MYO1CO00159 1063 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 WNT7AO00755 349 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 VIL1P09327 827 aaKnown RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 MYCLP1P12525 358 aaPredicted RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 ZNF16P17020 682 aaPredicted RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 IBSPP21815 317 aaPredicted RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 RRM1P23921 792 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 SCNN1DP51172 638 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 GDF10P55107 478 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 HNRNPH2P55795 449 aaKnown RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 PDE4BQ07343 736 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 DHX9Q08211 1270 aaKnown RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 COX10Q12887 443 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 UBE4AQ14139 1066 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 SEPT2Q15019 361 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 SEPT7Q16181 437 aaKnown RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 NFE2L2Q16236 605 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 KIF4BQ2VIQ3 1234 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 CCDC144BQ3MJ40 725 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 KBTBD12Q3ZCT8 623 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 NOM1Q5C9Z4 860 aaKnown RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 PPP1R26Q5T8A7 1209 aaPredicted RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 PDXDC1Q6P996 788 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 CCDC186Q7Z3E2 898 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 TEX11Q8IYF3 940 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 TRIML1Q8N9V2 468 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 C1orf216Q8TAB5 229 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 FAM76AQ8TAV0 307 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 ZNF483Q8TF39 744 aaPredicted RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 SLC39A13Q96H72 371 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms