RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 FGFR2P21802 821 aa15.83■□□□□ 0.12
BRCA1-209ENST00000470026 FILIP1Q7Z7B0 1213 aa15.83■□□□□ 0.12
BRCA1-209ENST00000470026 IGDCC4Q8TDY8 1250 aa15.83■□□□□ 0.12
BRCA1-209ENST00000470026 MAP3K14Q99558 947 aa15.83■□□□□ 0.12
BRCA1-209ENST00000470026 ALG1Q9BT22 464 aa15.83■□□□□ 0.12
BRCA1-209ENST00000470026 UQCRFS1P1P0C7P4 283 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 PDE6AP16499 860 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 U2AF2P26368 475 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■■□□ 19.1
BRCA1-209ENST00000470026 METAP2P50579 478 aaKnown RBP eCLIP15.82■□□□□ 0.12
BRCA1-209ENST00000470026 PTPN14Q15678 1187 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 VPS37DQ86XT2 251 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 RAB11FIP4Q86YS3 637 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.82■□□□□ 0.12
BRCA1-209ENST00000470026 NUP98P52948 1817 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 ZNF532Q9HCE3 1301 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-209ENST00000470026 CDC27P30260 824 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 CCDC102BQ68D86 513 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 KRT40Q6A162 431 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 CCDC150Q8NCX0 1101 aa15.82■□□□□ 0.12
BRCA1-209ENST00000470026 STRBPQ96SI9 672 aaKnown RBP15.82■□□□□ 0.12
BRCA1-209ENST00000470026 XPO4Q9C0E2 1151 aaKnown RBP15.82■□□□□ 0.12
BRCA1-209ENST00000470026 FAM217BQ9NTX9 383 aaPredicted RBP15.82■□□□□ 0.12
BRCA1-209ENST00000470026 STK36Q9NRP7 1315 aa15.81■□□□□ 0.12
BRCA1-209ENST00000470026 KIF2AO00139 706 aaPredicted RBP15.81■□□□□ 0.12
BRCA1-209ENST00000470026 IRS4O14654 1257 aaPredicted RBP15.81■□□□□ 0.12
BRCA1-209ENST00000470026 CYP19A1P11511 503 aaPredicted RBP15.81■□□□□ 0.12
BRCA1-209ENST00000470026 LIFRP42702 1097 aa15.81■□□□□ 0.12
BRCA1-209ENST00000470026 AIFM3Q96NN9 605 aa15.81■□□□□ 0.12
BRCA1-209ENST00000470026 FEZ1Q99689 392 aa15.81■□□□□ 0.12
BRCA1-209ENST00000470026 HSD3B7Q9H2F3 369 aa15.81■□□□□ 0.12
BRCA1-209ENST00000470026 CNNM1Q9NRU3 951 aa15.81■□□□□ 0.12
BRCA1-209ENST00000470026 ZNF330Q9Y3S2 320 aaPredicted RBP15.81■□□□□ 0.12
BRCA1-209ENST00000470026 DISP2A7MBM2 1401 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 BCL9O00512 1426 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 PDE8AO60658 829 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 PHKA1P46020 1223 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 CPLX2Q6PUV4 134 aaKnown RBP15.8■□□□□ 0.12
BRCA1-209ENST00000470026 SHC4Q6S5L8 630 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 ELOA2Q8IYF1 753 aaPredicted RBP15.8■□□□□ 0.12
BRCA1-209ENST00000470026 JMYQ8N9B5 988 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 ARID3AQ99856 593 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 LY9Q9HBG7 655 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 SENP2Q9HC62 589 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 PRDM4Q9UKN5 801 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 ERVV-1B6SEH8 477 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 GPTP24298 496 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 SYKP43405 635 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
BRCA1-209ENST00000470026 RESP18Q5W5W9 173 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 ARMCX5Q6P1M9 558 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 SLC4A9Q96Q91 983 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 STRN4Q9NRL3 753 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 IFNKQ9P0W0 207 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 WWC3Q9ULE0 1092 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 TBC1D2BQ9UPU7 963 aa15.8■□□□□ 0.12
BRCA1-209ENST00000470026 CHD4Q14839 1912 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 PSDA5PKW4 1024 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-209ENST00000470026 B4E1Z4 1266 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 RANBP6O60518 1105 aaKnown RBP15.79■□□□□ 0.12
BRCA1-209ENST00000470026 ZSCAN20P17040 1043 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-209ENST00000470026 TPM4P67936 248 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 LPIN2Q92539 896 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 NHSL1Q5SYE7 1610 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 PATL2C9JE40 543 aaKnown RBP15.79■□□□□ 0.12
BRCA1-209ENST00000470026 ZBTB43O43298 467 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 IDH1O75874 414 aaKnown RBP15.79■□□□□ 0.12
BRCA1-209ENST00000470026 MARCKSP29966 332 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-209ENST00000470026 EVA1CP58658 441 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 PUM3Q15397 648 aaKnown RBP15.79■□□□□ 0.12
BRCA1-209ENST00000470026 UTP14CQ5TAP6 766 aaKnown RBP15.79■□□□□ 0.12
BRCA1-209ENST00000470026 E4F1Q66K89 784 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-209ENST00000470026 AK7Q96M32 723 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 SLAIN2Q9P270 581 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 CGNQ9P2M7 1197 aaKnown RBP15.79■□□□□ 0.12
BRCA1-209ENST00000470026 UBN2Q6ZU65 1347 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 MROH5Q6ZUA9 1318 aa15.79■□□□□ 0.12
BRCA1-209ENST00000470026 MYO1BO43795 1136 aa15.78■□□□□ 0.12
BRCA1-209ENST00000470026 FBXW7Q969H0 707 aa15.78■□□□□ 0.12
BRCA1-209ENST00000470026 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.78■□□□□ 0.12
BRCA1-209ENST00000470026 EPB41L4AQ9HCS5 686 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-209ENST00000470026 SLIT2O94813 1529 aa15.78■□□□□ 0.12
BRCA1-209ENST00000470026 BIN1O00499 593 aa15.77■□□□□ 0.12
BRCA1-209ENST00000470026 CUTAO60888 179 aa15.77■□□□□ 0.12
BRCA1-209ENST00000470026 IARSP41252 1262 aaKnown RBP15.77■□□□□ 0.12
BRCA1-209ENST00000470026 ZNF34Q8IZ26 560 aa15.77■□□□□ 0.12
BRCA1-209ENST00000470026 SMC2O95347 1197 aa15.77■□□□□ 0.11
BRCA1-209ENST00000470026 TUBB4AP04350 444 aa15.77■□□□□ 0.11
BRCA1-209ENST00000470026 FANCCQ00597 558 aa15.77■□□□□ 0.11
BRCA1-209ENST00000470026 TMC6Q7Z403 805 aa15.77■□□□□ 0.11
BRCA1-209ENST00000470026 IFNL3Q8IZI9 196 aa15.77■□□□□ 0.11
BRCA1-209ENST00000470026 KIF18AQ8NI77 898 aa15.77■□□□□ 0.11
BRCA1-209ENST00000470026 PHKBQ93100 1093 aa15.77■□□□□ 0.11
BRCA1-209ENST00000470026 MTA3Q9BTC8 594 aa15.77■□□□□ 0.11
BRCA1-209ENST00000470026 TRMT112Q9UI30 125 aaKnown RBP15.77■□□□□ 0.11
BRCA1-209ENST00000470026 TACC3Q9Y6A5 838 aa15.77■□□□□ 0.11
BRCA1-209ENST00000470026 BCORQ6W2J9 1755 aa15.77■□□□□ 0.11
BRCA1-209ENST00000470026 GOLGA8AA7E2F4 631 aa15.76■□□□□ 0.11
BRCA1-209ENST00000470026 FMNL1O95466 1100 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-209ENST00000470026 APPP05067 770 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms