RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 ECEL1O95672 775 aa8.95□□□□□ -0.98
UBE3C-204ENST00000469336 CTSHP09668 335 aa8.95□□□□□ -0.98
UBE3C-204ENST00000469336 XRCC5P13010 732 aaKnown RBP8.95□□□□□ -0.98
UBE3C-204ENST00000469336 RXRBP28702 533 aa8.95□□□□□ -0.98
UBE3C-204ENST00000469336 GSTT1P30711 240 aa8.95□□□□□ -0.98
UBE3C-204ENST00000469336 PCDH1Q08174 1060 aa8.95□□□□□ -0.98
UBE3C-204ENST00000469336 MFSD14AQ96MC6 490 aa8.95□□□□□ -0.98
UBE3C-204ENST00000469336 NRSN2Q9GZP1 204 aa8.95□□□□□ -0.98
UBE3C-204ENST00000469336 TMEM238LA0A1B0GVL6 79 aa8.94□□□□□ -0.98
UBE3C-204ENST00000469336 COBLO75128 1261 aa8.94□□□□□ -0.98
UBE3C-204ENST00000469336 ADAMTS4O75173 837 aa8.94□□□□□ -0.98
UBE3C-204ENST00000469336 TIAF1O95411 115 aa8.94□□□□□ -0.98
UBE3C-204ENST00000469336 USP17L7P0C7H9 530 aa8.94□□□□□ -0.98
UBE3C-204ENST00000469336 PTPN12Q05209 780 aaKnown RBP8.94□□□□□ -0.98
UBE3C-204ENST00000469336 TSNAXIP1Q2TAA8 658 aa8.94□□□□□ -0.98
UBE3C-204ENST00000469336 LDLRAD1Q5T700 205 aa8.94□□□□□ -0.98
UBE3C-204ENST00000469336 SMG8Q8ND04 991 aaKnown RBP8.94□□□□□ -0.98
UBE3C-204ENST00000469336 BACH2Q9BYV9 841 aa8.94□□□□□ -0.98
UBE3C-204ENST00000469336 CLEC4MQ9H2X3 399 aaPredicted RBP8.94□□□□□ -0.98
UBE3C-204ENST00000469336 WDR64B1ANS9 1081 aa8.93□□□□□ -0.98
UBE3C-204ENST00000469336 ITPKAP23677 461 aa8.93□□□□□ -0.98
UBE3C-204ENST00000469336 EXOSC6Q5RKV6 272 aaKnown RBP8.93□□□□□ -0.98
UBE3C-204ENST00000469336 CDPF1Q6NVV7 123 aa8.93□□□□□ -0.98
UBE3C-204ENST00000469336 C3orf58Q8NDZ4 430 aa8.93□□□□□ -0.98
UBE3C-204ENST00000469336 ANKRD24Q8TF21 1146 aa8.93□□□□□ -0.98
UBE3C-204ENST00000469336 CYP4F12Q9HCS2 524 aa8.93□□□□□ -0.98
UBE3C-204ENST00000469336 IGSF5Q9NSI5 407 aa8.93□□□□□ -0.98
UBE3C-204ENST00000469336 PPM1HQ9ULR3 514 aa8.93□□□□□ -0.98
UBE3C-204ENST00000469336 MAOBP27338 520 aa8.92□□□□□ -0.98
UBE3C-204ENST00000469336 RANGAP1P46060 587 aaPredicted RBP8.92□□□□□ -0.98
UBE3C-204ENST00000469336 FBXL6Q8N531 539 aa8.92□□□□□ -0.98
UBE3C-204ENST00000469336 FBLIM1Q8WUP2 373 aa8.92□□□□□ -0.98
UBE3C-204ENST00000469336 KRTAP9-2Q9BYQ4 174 aa8.92□□□□□ -0.98
UBE3C-204ENST00000469336 SUGCTQ9HAC7 445 aa8.92□□□□□ -0.98
UBE3C-204ENST00000469336 ZFYVE1Q9HBF4 777 aa8.92□□□□□ -0.98
UBE3C-204ENST00000469336 HIF3AQ9Y2N7 669 aa8.92□□□□□ -0.98
UBE3C-204ENST00000469336 KIAA1324LA8MWY0 1029 aaPredicted RBP8.91□□□□□ -0.98
UBE3C-204ENST00000469336 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.91□□□□□ -0.98
UBE3C-204ENST00000469336 SCAMP3O14828 347 aaKnown RBP8.91□□□□□ -0.98
UBE3C-204ENST00000469336 HOXA10P31260 410 aaPredicted RBP8.91□□□□□ -0.98
UBE3C-204ENST00000469336 FCGRTP55899 365 aa8.91□□□□□ -0.98
UBE3C-204ENST00000469336 F13BP05160 661 aa8.9□□□□□ -0.98
UBE3C-204ENST00000469336 TCF3P15923 654 aa8.9□□□□□ -0.98
UBE3C-204ENST00000469336 ST13P50502 369 aaKnown RBP8.9□□□□□ -0.98
UBE3C-204ENST00000469336 SOX4Q06945 474 aaPredicted RBP8.9□□□□□ -0.98
UBE3C-204ENST00000469336 POU4F3Q15319 338 aa8.9□□□□□ -0.98
UBE3C-204ENST00000469336 NFKBIBQ15653 356 aa8.9□□□□□ -0.98
UBE3C-204ENST00000469336 RPS26P11Q5JNZ5 115 aaPredicted RBP8.9□□□□□ -0.98
UBE3C-204ENST00000469336 DTHD1Q6ZMT9 781 aa8.9□□□□□ -0.98
UBE3C-204ENST00000469336 TMEM87AQ8NBN3 555 aa8.9□□□□□ -0.98
UBE3C-204ENST00000469336 C2CD4AQ8NCU7 369 aaPredicted RBP8.9□□□□□ -0.98
UBE3C-204ENST00000469336 TRIM56Q9BRZ2 755 aaKnown RBP8.9□□□□□ -0.98
UBE3C-204ENST00000469336 ZNF576Q9H609 170 aa8.9□□□□□ -0.98
UBE3C-204ENST00000469336 METTL5Q9NRN9 209 aaKnown RBP8.9□□□□□ -0.98
UBE3C-204ENST00000469336 USP31Q70CQ4 1352 aa8.89□□□□□ -0.99
UBE3C-204ENST00000469336 USP11P51784 963 aa8.89□□□□□ -0.99
UBE3C-204ENST00000469336 ZNF157P51786 506 aaPredicted RBP8.89□□□□□ -0.99
UBE3C-204ENST00000469336 KRTAP9-6A0A140TA67 174 aa8.88□□□□□ -0.99
UBE3C-204ENST00000469336 FAM95CA0A1B0GW59 222 aa8.88□□□□□ -0.99
UBE3C-204ENST00000469336 SPINK2P20155 84 aa8.88□□□□□ -0.99
UBE3C-204ENST00000469336 ADMP35318 185 aa8.88□□□□□ -0.99
UBE3C-204ENST00000469336 TAF1CQ15572 869 aaPredicted RBP8.88□□□□□ -0.99
UBE3C-204ENST00000469336 OAS3Q9Y6K5 1087 aaKnown RBP8.88□□□□□ -0.99
UBE3C-204ENST00000469336 ADH5P11766 374 aa8.87□□□□□ -0.99
UBE3C-204ENST00000469336 AKAP4Q5JQC9 854 aa8.87□□□□□ -0.99
UBE3C-204ENST00000469336 MEI1Q5TIA1 1274 aa8.87□□□□□ -0.99
UBE3C-204ENST00000469336 ACTL7BQ9Y614 415 aa8.87□□□□□ -0.99
UBE3C-204ENST00000469336 B3GALT4O96024 378 aa8.86□□□□□ -0.99
UBE3C-204ENST00000469336 CYP11A1P05108 521 aa8.86□□□□□ -0.99
UBE3C-204ENST00000469336 GRIK1P39086 918 aa8.86□□□□□ -0.99
UBE3C-204ENST00000469336 GP2P55259 537 aaKnown RBP8.86□□□□□ -0.99
UBE3C-204ENST00000469336 FANCCQ00597 558 aa8.86□□□□□ -0.99
UBE3C-204ENST00000469336 TTF2Q9UNY4 1162 aaKnown RBP8.86□□□□□ -0.99
UBE3C-204ENST00000469336 AKAP2Q9Y2D5 859 aa8.86□□□□□ -0.99
UBE3C-204ENST00000469336 RAB6AP20340 208 aa8.85□□□□□ -0.99
UBE3C-204ENST00000469336 ZNF76P36508 570 aa8.85□□□□□ -0.99
UBE3C-204ENST00000469336 FAAP100Q0VG06 881 aa8.85□□□□□ -0.99
UBE3C-204ENST00000469336 INTS5Q6P9B9 1019 aaKnown RBP8.85□□□□□ -0.99
UBE3C-204ENST00000469336 DYMQ7RTS9 669 aa8.85□□□□□ -0.99
UBE3C-204ENST00000469336 DTX1Q86Y01 620 aa8.85□□□□□ -0.99
UBE3C-204ENST00000469336 NOC4LQ9BVI4 516 aaKnown RBP8.85□□□□□ -0.99
UBE3C-204ENST00000469336 CEP44Q9C0F1 390 aa8.85□□□□□ -0.99
UBE3C-204ENST00000469336 AP4E1Q9UPM8 1137 aa8.85□□□□□ -0.99
UBE3C-204ENST00000469336 NFICP08651 508 aa8.84□□□□□ -0.99
UBE3C-204ENST00000469336 PAOXQ6QHF9 649 aa8.84□□□□□ -0.99
UBE3C-204ENST00000469336 CORO1BQ9BR76 489 aa8.84□□□□□ -0.99
UBE3C-204ENST00000469336 ZC3H12CQ9C0D7 883 aaKnown RBP8.84□□□□□ -0.99
UBE3C-204ENST00000469336 RAD18Q9NS91 495 aa8.84□□□□□ -0.99
UBE3C-204ENST00000469336 ATG3Q9NT62 314 aa8.84□□□□□ -0.99
UBE3C-204ENST00000469336 FAM105AQ9NUU6 356 aa8.84□□□□□ -0.99
UBE3C-204ENST00000469336 PIM2Q9P1W9 311 aa8.84□□□□□ -0.99
UBE3C-204ENST00000469336 HDLBPQ00341 1268 aaKnown RBP8.83□□□□□ -1
UBE3C-204ENST00000469336 MCTP1Q6DN14 999 aa8.83□□□□□ -1
UBE3C-204ENST00000469336 SV2BQ7L1I2 683 aa8.83□□□□□ -1
UBE3C-204ENST00000469336 RNF34Q969K3 372 aa8.83□□□□□ -1
UBE3C-204ENST00000469336 TBC1D32Q96NH3 1257 aa8.83□□□□□ -1
UBE3C-204ENST00000469336 OSBPL1AQ9BXW6 950 aa8.83□□□□□ -1
UBE3C-204ENST00000469336 LGR6Q9HBX8 967 aa8.83□□□□□ -1
UBE3C-204ENST00000469336 PRKAG2Q9UGJ0 569 aa8.83□□□□□ -1
UBE3C-204ENST00000469336 FAM170BA6NMN3 283 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms