RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 KRT27Q7Z3Y8 459 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 STK24Q9Y6E0 443 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 SEMA3EO15041 775 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 NCBP1Q09161 790 aaKnown RBP17.1■□□□□ 0.33
LIMS2-213ENST00000469300 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 HS2ST1Q7LGA3 356 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 MCM3P25205 808 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 CCDC129Q6ZRS4 1044 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 TRMT1LQ7Z2T5 733 aaKnown RBP17.1■□□□□ 0.33
LIMS2-213ENST00000469300 TRMT2AQ8IZ69 625 aaKnown RBP17.1■□□□□ 0.33
LIMS2-213ENST00000469300 FAM227BQ96M60 508 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 ALS2CR12Q96Q35 445 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 NCAPD2Q15021 1401 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 H7C1D1 291 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 TMC6Q7Z403 805 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 WWC3Q9ULE0 1092 aa17.1■□□□□ 0.33
LIMS2-213ENST00000469300 BICDL2A1A5D9 508 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 USPL1Q5W0Q7 1092 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 MFSD14BQ5SR56 506 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 RNF17Q9BXT8 1623 aaKnown RBP17.09■□□□□ 0.33
LIMS2-213ENST00000469300 XRCC6P12956 609 aaKnown RBP eCLIP17.09■□□□□ 0.33
LIMS2-213ENST00000469300 CLCN1P35523 988 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 IFI16Q16666 785 aaKnown RBP17.09■□□□□ 0.33
LIMS2-213ENST00000469300 LEMD3Q9Y2U8 911 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 SSH2Q76I76 1423 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 C2CD5Q86YS7 1000 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 EHBP1Q8NDI1 1231 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 CPLX3Q8WVH0 158 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 SPAG5Q96R06 1193 aa17.09■□□□□ 0.33
LIMS2-213ENST00000469300 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.33
LIMS2-213ENST00000469300 ZNF853P0CG23 659 aa17.08■□□□□ 0.33
LIMS2-213ENST00000469300 PLCD1P51178 756 aa17.08■□□□□ 0.33
LIMS2-213ENST00000469300 ZKSCAN3Q9BRR0 538 aa17.08■□□□□ 0.33
LIMS2-213ENST00000469300 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.33
LIMS2-213ENST00000469300 HEG1Q9ULI3 1381 aa17.08■□□□□ 0.33
LIMS2-213ENST00000469300 SYT1P21579 422 aa17.08■□□□□ 0.32
LIMS2-213ENST00000469300 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.32
LIMS2-213ENST00000469300 ZSCAN23Q3MJ62 389 aa17.08■□□□□ 0.32
LIMS2-213ENST00000469300 GIMAP6Q6P9H5 292 aa17.08■□□□□ 0.32
LIMS2-213ENST00000469300 TBC1D5Q92609 795 aa17.08■□□□□ 0.32
LIMS2-213ENST00000469300 DHX58Q96C10 678 aa17.08■□□□□ 0.32
LIMS2-213ENST00000469300 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.08■□□□□ 0.32
LIMS2-213ENST00000469300 AKNAD1Q5T1N1 836 aa17.08■□□□□ 0.32
LIMS2-213ENST00000469300 FERMT2Q96AC1 680 aa17.08■□□□□ 0.32
LIMS2-213ENST00000469300 FAM13AO94988 1023 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 PDE8BO95263 885 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 ZRSR2Q15696 482 aaKnown RBP17.07■□□□□ 0.32
LIMS2-213ENST00000469300 ADGRB3O60242 1522 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 DYNC1I1O14576 645 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 SLC1A4P43007 532 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 CDC42BPGQ6DT37 1551 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 CCDC24Q8N4L8 307 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 ANKRD62A6NC57 917 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 BBOX1O75936 387 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 ADCY5O95622 1261 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 PCP11498 1178 aaKnown RBP17.07■□□□□ 0.32
LIMS2-213ENST00000469300 UBASH3AP57075 661 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 GTF2IP78347 998 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 EAF2Q96CJ1 260 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-213ENST00000469300 HAUS7Q99871 368 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 HSPA4P34932 840 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 IMPG2Q9BZV3 1241 aa17.07■□□□□ 0.32
LIMS2-213ENST00000469300 TTF2Q9UNY4 1162 aaKnown RBP17.07■□□□□ 0.32
LIMS2-213ENST00000469300 MCM7P33993 719 aa17.06■□□□□ 0.32
LIMS2-213ENST00000469300 MAP9Q49MG5 647 aa17.06■□□□□ 0.32
LIMS2-213ENST00000469300 CASQ1P31415 396 aa17.06■□□□□ 0.32
LIMS2-213ENST00000469300 GPCPD1Q9NPB8 672 aa17.06■□□□□ 0.32
LIMS2-213ENST00000469300 PNMA2Q9UL42 364 aa17.06■□□□□ 0.32
LIMS2-213ENST00000469300 LMTK2Q8IWU2 1503 aa17.06■□□□□ 0.32
LIMS2-213ENST00000469300 AKR1B10O60218 316 aa17.06■□□□□ 0.32
LIMS2-213ENST00000469300 KRT25Q7Z3Z0 450 aa17.06■□□□□ 0.32
LIMS2-213ENST00000469300 XDHP47989 1333 aa17.06■□□□□ 0.32
LIMS2-213ENST00000469300 ENOX2Q16206 610 aaKnown RBP17.05■□□□□ 0.32
LIMS2-213ENST00000469300 MCTP2Q6DN12 878 aa17.05■□□□□ 0.32
LIMS2-213ENST00000469300 RXRAP19793 462 aa17.05■□□□□ 0.32
LIMS2-213ENST00000469300 GIMAP7Q8NHV1 300 aa17.05■□□□□ 0.32
LIMS2-213ENST00000469300 CYLC1P35663 651 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-213ENST00000469300 HAUS3Q68CZ6 603 aa17.05■□□□□ 0.32
LIMS2-213ENST00000469300 FMNL3Q8IVF7 1028 aa17.05■□□□□ 0.32
LIMS2-213ENST00000469300 TCHPQ9BT92 498 aa17.05■□□□□ 0.32
LIMS2-213ENST00000469300 CLTCL1P53675 1640 aa17.05■□□□□ 0.32
LIMS2-213ENST00000469300 DTNBO60941 627 aa17.05■□□□□ 0.32
LIMS2-213ENST00000469300 CHRNDQ07001 517 aa17.05■□□□□ 0.32
LIMS2-213ENST00000469300 APBB1IPQ7Z5R6 666 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-213ENST00000469300 NAA15Q9BXJ9 866 aaKnown RBP17.05■□□□□ 0.32
LIMS2-213ENST00000469300 USP40Q9NVE5 1235 aa17.05■□□□□ 0.32
LIMS2-213ENST00000469300 V9GY48 417 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-213ENST00000469300 ZBED4O75132 1171 aa17.04■□□□□ 0.32
LIMS2-213ENST00000469300 UBE3CQ15386 1083 aa17.04■□□□□ 0.32
LIMS2-213ENST00000469300 BRDTQ58F21 947 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-213ENST00000469300 ISM2Q6H9L7 571 aa17.04■□□□□ 0.32
LIMS2-213ENST00000469300 MAPKAPK5Q8IW41 473 aa17.04■□□□□ 0.32
LIMS2-213ENST00000469300 PLVAPQ9BX97 442 aa17.04■□□□□ 0.32
LIMS2-213ENST00000469300 ELP1O95163 1332 aa17.04■□□□□ 0.32
LIMS2-213ENST00000469300 PRDM1O75626 825 aa17.04■□□□□ 0.32
LIMS2-213ENST00000469300 PDE6AP16499 860 aa17.04■□□□□ 0.32
LIMS2-213ENST00000469300 CC2D2BQ6DHV5 1058 aa17.04■□□□□ 0.32
LIMS2-213ENST00000469300 LUZP1Q86V48 1076 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms