RNA–Protein interactions for RNA: ENST00000468654.1

SHANK1-206, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 668 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-206ENST00000468654 CNKSR2Q8WXI2 1034 aa26.17■■□□□ 1.78
SHANK1-206ENST00000468654 FRAT1Q92837 279 aaPredicted RBP26.17■■□□□ 1.78
SHANK1-206ENST00000468654 PTPN18Q99952 460 aa26.17■■□□□ 1.78
SHANK1-206ENST00000468654 DENND2AQ9ULE3 1009 aa26.17■■□□□ 1.78
SHANK1-206ENST00000468654 DAGLAQ9Y4D2 1042 aa26.17■■□□□ 1.78
SHANK1-206ENST00000468654 MAP3K9P80192 1104 aa26.16■■□□□ 1.78
SHANK1-206ENST00000468654 DIXDC1Q155Q3 683 aa26.16■■□□□ 1.78
SHANK1-206ENST00000468654 MIER1Q8N108 512 aa26.16■■□□□ 1.78
SHANK1-206ENST00000468654 LDHBP07195 334 aaKnown RBP26.15■■□□□ 1.78
SHANK1-206ENST00000468654 CCDC102BQ68D86 513 aa26.15■■□□□ 1.78
SHANK1-206ENST00000468654 OTOP1Q7RTM1 612 aa26.15■■□□□ 1.78
SHANK1-206ENST00000468654 HOOK2Q96ED9 719 aa26.15■■□□□ 1.78
SHANK1-206ENST00000468654 CSADQ9Y600 493 aa26.15■■□□□ 1.78
SHANK1-206ENST00000468654 GNAI2P04899 355 aa26.14■■□□□ 1.78
SHANK1-206ENST00000468654 HNRNPUQ00839 825 aaKnown RBP eCLIP26.14■■□□□ 1.78
SHANK1-206ENST00000468654 CLUAP1Q96AJ1 413 aa26.14■■□□□ 1.78
SHANK1-206ENST00000468654 MS4A4AQ96JQ5 239 aa26.14■■□□□ 1.78
SHANK1-206ENST00000468654 TRIM17Q9Y577 477 aa26.14■■□□□ 1.78
SHANK1-206ENST00000468654 MGAMO43451 1857 aa26.14■■□□□ 1.78
SHANK1-206ENST00000468654 PDS5AQ29RF7 1337 aaKnown RBP26.14■■□□□ 1.77
SHANK1-206ENST00000468654 OTUD7BQ6GQQ9 843 aa26.13■■□□□ 1.77
SHANK1-206ENST00000468654 PHIPQ8WWQ0 1821 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 A0A1B0GUL7 405 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 CAP1Q01518 475 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 TFCP2Q12800 502 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 RASGRF1Q13972 1273 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 DIEXFQ68CQ4 756 aaKnown RBP26.12■■□□□ 1.77
SHANK1-206ENST00000468654 CDC42EP5Q6NZY7 148 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 ZGPATQ8N5A5 531 aaKnown RBP26.12■■□□□ 1.77
SHANK1-206ENST00000468654 CD99L2Q8TCZ2 262 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 FAM151AQ8WW52 585 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 WRNIP1Q96S55 665 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 AKAP2Q9Y2D5 859 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 DOCK1Q14185 1865 aa26.12■■□□□ 1.77
SHANK1-206ENST00000468654 SPDYE5A6NIY4 337 aa26.11■■□□□ 1.77
SHANK1-206ENST00000468654 TIMM10P62072 90 aa26.11■■□□□ 1.77
SHANK1-206ENST00000468654 ZKSCAN2Q63HK3 967 aa26.11■■□□□ 1.77
SHANK1-206ENST00000468654 BRI3BPQ8WY22 251 aa26.11■■□□□ 1.77
SHANK1-206ENST00000468654 SNCAIPQ9Y6H5 919 aa26.11■■□□□ 1.77
SHANK1-206ENST00000468654 DCAF15Q66K64 600 aa26.1■■□□□ 1.77
SHANK1-206ENST00000468654 TMEM57Q8N5G2 664 aa26.1■■□□□ 1.77
SHANK1-206ENST00000468654 OTUD5Q96G74 571 aa26.1■■□□□ 1.77
SHANK1-206ENST00000468654 XAGE2Q96GT9 111 aa26.1■■□□□ 1.77
SHANK1-206ENST00000468654 ERO1AQ96HE7 468 aa26.1■■□□□ 1.77
SHANK1-206ENST00000468654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.1■■□□□ 1.77
SHANK1-206ENST00000468654 ATAD5Q96QE3 1844 aa26.09■■□□□ 1.77
SHANK1-206ENST00000468654 GTF2A2P52657 109 aa26.09■■□□□ 1.77
SHANK1-206ENST00000468654 NFIAQ12857 509 aa26.09■■□□□ 1.77
SHANK1-206ENST00000468654 MVPQ14764 893 aaKnown RBP26.09■■□□□ 1.77
SHANK1-206ENST00000468654 GAKO14976 1311 aa26.09■■□□□ 1.77
SHANK1-206ENST00000468654 PNMA6EA0A0J9YXQ4 647 aa26.08■■□□□ 1.77
SHANK1-206ENST00000468654 ERO1BQ86YB8 467 aa26.08■■□□□ 1.77
SHANK1-206ENST00000468654 ZNF341Q9BYN7 854 aa26.08■■□□□ 1.77
SHANK1-206ENST00000468654 FAM198AQ9UFP1 575 aa26.08■■□□□ 1.77
SHANK1-206ENST00000468654 RFX7Q2KHR2 1363 aa26.07■■□□□ 1.76
SHANK1-206ENST00000468654 CDK5RAP2Q96SN8 1893 aa26.07■■□□□ 1.76
SHANK1-206ENST00000468654 CCL15-CCL14A0A0B4J2E2 113 aa26.07■■□□□ 1.76
SHANK1-206ENST00000468654 CCL15Q16663 113 aa26.07■■□□□ 1.76
SHANK1-206ENST00000468654 ZKSCAN4Q969J2 545 aaPredicted RBP26.07■■□□□ 1.76
SHANK1-206ENST00000468654 TCP10Q12799 353 aa26.06■■□□□ 1.76
SHANK1-206ENST00000468654 PRPF38BQ5VTL8 546 aaKnown RBP26.06■■□□□ 1.76
SHANK1-206ENST00000468654 FAM43AQ8N2R8 423 aa26.06■■□□□ 1.76
SHANK1-206ENST00000468654 USP40Q9NVE5 1235 aa26.06■■□□□ 1.76
SHANK1-206ENST00000468654 MAST2Q6P0Q8 1798 aa26.05■■□□□ 1.76
SHANK1-206ENST00000468654 SP3Q02447 781 aa26.05■■□□□ 1.76
SHANK1-206ENST00000468654 TAF1CQ15572 869 aaPredicted RBP26.05■■□□□ 1.76
SHANK1-206ENST00000468654 MIGA2Q7L4E1 593 aa26.05■■□□□ 1.76
SHANK1-206ENST00000468654 DZIP1Q86YF9 867 aaKnown RBP26.05■■□□□ 1.76
SHANK1-206ENST00000468654 PTPN22Q9Y2R2 807 aa26.05■■□□□ 1.76
SHANK1-206ENST00000468654 MYO5AQ9Y4I1 1855 aaKnown RBP26.04■■□□□ 1.76
SHANK1-206ENST00000468654 PPIL2Q13356 520 aa26.04■■□□□ 1.76
SHANK1-206ENST00000468654 SPTY2D1Q68D10 685 aaPredicted RBP26.04■■□□□ 1.76
SHANK1-206ENST00000468654 ABCF2Q9UG63 623 aa26.04■■□□□ 1.76
SHANK1-206ENST00000468654 ZNF112Q9UJU3 913 aa26.04■■□□□ 1.76
SHANK1-206ENST00000468654 INPP5BP32019 993 aa26.03■■□□□ 1.76
SHANK1-206ENST00000468654 G3BP1Q13283 466 aaKnown RBP eCLIP26.03■■□□□ 1.76
SHANK1-206ENST00000468654 POLA2Q14181 598 aa26.03■■□□□ 1.76
SHANK1-206ENST00000468654 SLF2Q8IX21 1173 aa26.03■■□□□ 1.76
SHANK1-206ENST00000468654 FAM163AQ96GL9 167 aaPredicted RBP26.03■■□□□ 1.76
SHANK1-206ENST00000468654 NEUROD6Q96NK8 337 aa26.03■■□□□ 1.76
SHANK1-206ENST00000468654 IDI2Q9BXS1 227 aa26.03■■□□□ 1.76
SHANK1-206ENST00000468654 ATRNL1Q5VV63 1379 aa26.03■■□□□ 1.76
SHANK1-206ENST00000468654 POTEFA5A3E0 1075 aa26.02■■□□□ 1.76
SHANK1-206ENST00000468654 IRF6O14896 467 aa26.02■■□□□ 1.76
SHANK1-206ENST00000468654 CETPP11597 493 aa26.02■■□□□ 1.76
SHANK1-206ENST00000468654 SNAPC2Q13487 334 aa26.02■■□□□ 1.76
SHANK1-206ENST00000468654 EFCC1Q9HA90 598 aa26.02■■□□□ 1.76
SHANK1-206ENST00000468654 ZBED9Q6R2W3 1325 aa26.02■■□□□ 1.76
SHANK1-206ENST00000468654 FOCADQ5VW36 1801 aa26.02■■□□□ 1.76
SHANK1-206ENST00000468654 MROH7-TTC4A0A0A0MT08 1334 aa26.01■■□□□ 1.75
SHANK1-206ENST00000468654 ARID4AP29374 1257 aaPredicted RBP26.01■■□□□ 1.75
SHANK1-206ENST00000468654 PPATQ06203 517 aa26.01■■□□□ 1.75
SHANK1-206ENST00000468654 ZFPM1Q8IX07 1006 aa26.01■■□□□ 1.75
SHANK1-206ENST00000468654 FTSJ3Q8IY81 847 aaKnown RBP26.01■■□□□ 1.75
SHANK1-206ENST00000468654 ZFYVE28Q9HCC9 887 aa26.01■■□□□ 1.75
SHANK1-206ENST00000468654 ZCCHC17Q9NP64 241 aaKnown RBP26.01■■□□□ 1.75
SHANK1-206ENST00000468654 HMG20BQ9P0W2 317 aa26.01■■□□□ 1.75
SHANK1-206ENST00000468654 ENTPD3O75355 529 aa26■■□□□ 1.75
SHANK1-206ENST00000468654 RGS3P49796 1198 aa26■■□□□ 1.75
SHANK1-206ENST00000468654 NOL9Q5SY16 702 aaKnown RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms