RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MB21D2Q8IYB1 491 aaPredicted RBP22.43■■□□□ 1.18
SMC4-209ENST00000468653 TTLL6Q8N841 843 aa22.43■■□□□ 1.18
SMC4-209ENST00000468653 NOL10Q9BSC4 688 aaKnown RBP22.43■■□□□ 1.18
SMC4-209ENST00000468653 ATF5Q9Y2D1 282 aaPredicted RBP22.43■■□□□ 1.18
SMC4-209ENST00000468653 CTDSPL2Q05D32 466 aa22.43■■□□□ 1.18
SMC4-209ENST00000468653 NECAB1Q8N987 351 aa22.43■■□□□ 1.18
SMC4-209ENST00000468653 MTFR1LQ9H019 292 aa22.43■■□□□ 1.18
SMC4-209ENST00000468653 PRC1O43663 620 aa22.42■■□□□ 1.18
SMC4-209ENST00000468653 BAG3O95817 575 aa22.42■■□□□ 1.18
SMC4-209ENST00000468653 DPEP1P16444 411 aa22.42■■□□□ 1.18
SMC4-209ENST00000468653 DIXDC1Q155Q3 683 aa22.42■■□□□ 1.18
SMC4-209ENST00000468653 GIMAP6Q6P9H5 292 aa22.42■■□□□ 1.18
SMC4-209ENST00000468653 RTFDC1Q9BY42 306 aaPredicted RBP22.42■■□□□ 1.18
SMC4-209ENST00000468653 SMC3Q9UQE7 1217 aa22.42■■□□□ 1.18
SMC4-209ENST00000468653 R3HDM1Q15032 1099 aaKnown RBP22.41■■□□□ 1.18
SMC4-209ENST00000468653 SLF2Q8IX21 1173 aa22.41■■□□□ 1.18
SMC4-209ENST00000468653 UPF1Q92900 1129 aaKnown RBP eCLIP22.41■■□□□ 1.181e-11■■■■□ 26.2
SMC4-209ENST00000468653 AGXT2Q9BYV1 514 aa22.41■■□□□ 1.18
SMC4-209ENST00000468653 MINDY4BA8MYZ0 360 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 C21orf2O43822 256 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 PPARAQ07869 468 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 STK3Q13188 491 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 AKNAD1Q5T1N1 836 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 MFSD6Q6ZSS7 791 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 TNPO1Q92973 898 aaKnown RBP22.4■■□□□ 1.18
SMC4-209ENST00000468653 CNNM2Q9H8M5 875 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 MROH7-TTC4A0A0A0MT08 1334 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 WDR19Q8NEZ3 1342 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 SUPT20HQ8NEM7 779 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 ATP8A2Q9NTI2 1148 aa22.4■■□□□ 1.18
SMC4-209ENST00000468653 B4E1Z4 1266 aa22.39■■□□□ 1.17
SMC4-209ENST00000468653 APOBRQ0VD83 1088 aa22.39■■□□□ 1.17
SMC4-209ENST00000468653 PODNQ7Z5L7 613 aa22.39■■□□□ 1.17
SMC4-209ENST00000468653 FBXL16Q8N461 479 aa22.39■■□□□ 1.17
SMC4-209ENST00000468653 STAG1Q8WVM7 1258 aa22.39■■□□□ 1.17
SMC4-209ENST00000468653 KRT23Q9C075 422 aa22.39■■□□□ 1.17
SMC4-209ENST00000468653 RNF41Q9H4P4 317 aaPredicted RBP22.39■■□□□ 1.17
SMC4-209ENST00000468653 DBNDD1Q9H9R9 158 aa22.39■■□□□ 1.17
SMC4-209ENST00000468653 SUGT1Q9Y2Z0 365 aa22.39■■□□□ 1.17
SMC4-209ENST00000468653 ANTXR2P58335 489 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 ST3GAL1Q11201 340 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 GRIPAP1Q4V328 841 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 NEDD4P46934 1319 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 KCNA3P22001 575 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 PPP4CP60510 307 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 PKP1Q13835 747 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 CERS3Q8IU89 383 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 INCENPQ9NQS7 918 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 TOMM22Q9NS69 142 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 ANAPC4Q9UJX5 808 aa22.38■■□□□ 1.17
SMC4-209ENST00000468653 NAP1L2Q9ULW6 460 aaPredicted RBP22.38■■□□□ 1.17
SMC4-209ENST00000468653 KIAA1551Q9HCM1 1747 aa22.37■■□□□ 1.17
SMC4-209ENST00000468653 CHD4Q14839 1912 aa22.37■■□□□ 1.17
SMC4-209ENST00000468653 USP5P45974 858 aa22.37■■□□□ 1.17
SMC4-209ENST00000468653 CCDC93Q567U6 631 aa22.37■■□□□ 1.17
SMC4-209ENST00000468653 STK11IPQ8N1F8 1099 aa22.37■■□□□ 1.17
SMC4-209ENST00000468653 DCP1AQ9NPI6 582 aaPredicted RBP22.37■■□□□ 1.17
SMC4-209ENST00000468653 DLEC1Q9Y238 1755 aa22.37■■□□□ 1.17
SMC4-209ENST00000468653 BTDP43251 543 aa22.36■■□□□ 1.17
SMC4-209ENST00000468653 TGFB2P61812 414 aa22.36■■□□□ 1.17
SMC4-209ENST00000468653 CTR9Q6PD62 1173 aa22.36■■□□□ 1.17
SMC4-209ENST00000468653 CYB5R4Q7L1T6 521 aa22.36■■□□□ 1.17
SMC4-209ENST00000468653 SH3RF3Q8TEJ3 882 aaPredicted RBP22.36■■□□□ 1.17
SMC4-209ENST00000468653 GTF3C6Q969F1 213 aa22.36■■□□□ 1.17
SMC4-209ENST00000468653 FAM163AQ96GL9 167 aaPredicted RBP22.36■■□□□ 1.17
SMC4-209ENST00000468653 USP17L12C9JPN9 530 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 USP17L21D6R901 530 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 ECE2O60344 883 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 GJB2P29033 226 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 AOC3Q16853 763 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 RRP12Q5JTH9 1297 aaKnown RBP22.35■■□□□ 1.17
SMC4-209ENST00000468653 RTKN2Q8IZC4 609 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 GBP4Q96PP9 640 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 GPHNQ9NQX3 736 aaPredicted RBP22.35■■□□□ 1.17
SMC4-209ENST00000468653 TACC3Q9Y6A5 838 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 TIAM2Q8IVF5 1701 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 GPR75-ASB3A0A0A6YYF3 556 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 PFKFB2O60825 505 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 KDM4AO75164 1064 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 CERS5Q8N5B7 392 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 ZNF274Q96GC6 653 aaPredicted RBP22.35■■□□□ 1.17
SMC4-209ENST00000468653 MYH2Q9UKX2 1941 aa22.35■■□□□ 1.17
SMC4-209ENST00000468653 SNED1Q8TER0 1413 aa22.34■■□□□ 1.17
SMC4-209ENST00000468653 CYP2D7A0A087X1C5 515 aa22.34■■□□□ 1.17
SMC4-209ENST00000468653 F8W031 263 aaPredicted RBP22.34■■□□□ 1.17
SMC4-209ENST00000468653 PLCG2P16885 1265 aa22.34■■□□□ 1.17
SMC4-209ENST00000468653 KIAA2012Q0VF49 1180 aa22.34■■□□□ 1.17
SMC4-209ENST00000468653 TMEM87BQ96K49 555 aa22.34■■□□□ 1.17
SMC4-209ENST00000468653 PIM2Q9P1W9 311 aa22.34■■□□□ 1.17
SMC4-209ENST00000468653 ARPP21Q9UBL0 812 aaPredicted RBP22.34■■□□□ 1.17
SMC4-209ENST00000468653 KIF13BQ9NQT8 1826 aa22.34■■□□□ 1.17
SMC4-209ENST00000468653 PPIP5K2O43314 1243 aa22.33■■□□□ 1.17
SMC4-209ENST00000468653 PDIA3P30101 505 aaKnown RBP22.33■■□□□ 1.17
SMC4-209ENST00000468653 EVCP57679 992 aa22.33■■□□□ 1.17
SMC4-209ENST00000468653 NKX2-3Q8TAU0 364 aa22.33■■□□□ 1.17
SMC4-209ENST00000468653 MXD3Q9BW11 206 aa22.33■■□□□ 1.17
SMC4-209ENST00000468653 MCM9Q9NXL9 1143 aa22.33■■□□□ 1.17
SMC4-209ENST00000468653 ZSWIM5Q9P217 1185 aa22.33■■□□□ 1.17
SMC4-209ENST00000468653 ANGEL1Q9UNK9 670 aaKnown RBP22.33■■□□□ 1.17
SMC4-209ENST00000468653 TTF2Q9UNY4 1162 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms