RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 GIMAP6Q6P9H5 292 aa13.58□□□□□ -0.24
MSH5-214ENST00000468602 MICALL2Q8IY33 904 aa13.58□□□□□ -0.24
MSH5-214ENST00000468602 RUFY2Q8WXA3 655 aa13.58□□□□□ -0.24
MSH5-214ENST00000468602 OSBP2Q969R2 916 aa13.58□□□□□ -0.24
MSH5-214ENST00000468602 MKRN1Q9UHC7 482 aaKnown RBP13.58□□□□□ -0.24
MSH5-214ENST00000468602 HACL1Q9UJ83 578 aa13.58□□□□□ -0.24
MSH5-214ENST00000468602 PITPNM2Q9BZ72 1349 aa13.58□□□□□ -0.24
MSH5-214ENST00000468602 WNT10BO00744 389 aa13.57□□□□□ -0.24
MSH5-214ENST00000468602 SGSM2O43147 1006 aa13.57□□□□□ -0.24
MSH5-214ENST00000468602 CYP7A1P22680 504 aa13.57□□□□□ -0.24
MSH5-214ENST00000468602 LMOD1P29536 600 aaPredicted RBP13.57□□□□□ -0.24
MSH5-214ENST00000468602 MFAP1P55081 439 aaKnown RBP13.57□□□□□ -0.24
MSH5-214ENST00000468602 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
MSH5-214ENST00000468602 PNMA8AQ86V59 439 aaPredicted RBP13.57□□□□□ -0.24
MSH5-214ENST00000468602 STRBPQ96SI9 672 aaKnown RBP13.57□□□□□ -0.24
MSH5-214ENST00000468602 PUS7LQ9H0K6 701 aaKnown RBP13.57□□□□□ -0.24
MSH5-214ENST00000468602 GJA3Q9Y6H8 435 aa13.57□□□□□ -0.24
MSH5-214ENST00000468602 EPS15P42566 896 aa13.56□□□□□ -0.24
MSH5-214ENST00000468602 NMIQ13287 307 aaPredicted RBP13.56□□□□□ -0.24
MSH5-214ENST00000468602 DLGAP5Q15398 846 aa13.56□□□□□ -0.24
MSH5-214ENST00000468602 ALX1Q15699 326 aa13.56□□□□□ -0.24
MSH5-214ENST00000468602 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
MSH5-214ENST00000468602 COL13A1Q5TAT6 717 aaPredicted RBP13.56□□□□□ -0.24
MSH5-214ENST00000468602 FBXW7Q969H0 707 aa13.56□□□□□ -0.24
MSH5-214ENST00000468602 PRMT6Q96LA8 375 aaPredicted RBP13.56□□□□□ -0.24
MSH5-214ENST00000468602 BCL11AQ9H165 835 aa13.56□□□□□ -0.24
MSH5-214ENST00000468602 TAF1DQ9H5J8 278 aaPredicted RBP13.56□□□□□ -0.24
MSH5-214ENST00000468602 DIAPH3Q9NSV4 1193 aa13.56□□□□□ -0.24
MSH5-214ENST00000468602 CDK5RAP2Q96SN8 1893 aa13.55□□□□□ -0.24
MSH5-214ENST00000468602 A0A0D9SFI3 127 aa13.55□□□□□ -0.24
MSH5-214ENST00000468602 MAGEB6P1A0A0J9YX57 407 aa13.55□□□□□ -0.24
MSH5-214ENST00000468602 VEGFAP15692 232 aaPredicted RBP13.55□□□□□ -0.24
MSH5-214ENST00000468602 BTDP43251 543 aa13.55□□□□□ -0.24
MSH5-214ENST00000468602 HIRAP54198 1017 aaPredicted RBP13.55□□□□□ -0.24
MSH5-214ENST00000468602 KIF4BQ2VIQ3 1234 aa13.55□□□□□ -0.24
MSH5-214ENST00000468602 CASC1Q6TDU7 716 aa13.55□□□□□ -0.24
MSH5-214ENST00000468602 FAM83AQ86UY5 434 aa13.55□□□□□ -0.24
MSH5-214ENST00000468602 ESYT1Q9BSJ8 1104 aa13.55□□□□□ -0.24
MSH5-214ENST00000468602 DDX60LQ5H9U9 1706 aaKnown RBP13.54□□□□□ -0.24
MSH5-214ENST00000468602 GPAA1O43292 621 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 ENTPD3O75355 529 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 WDHD1O75717 1129 aaPredicted RBP13.54□□□□□ -0.24
MSH5-214ENST00000468602 EPHX2P34913 555 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 CDC42EP5Q6NZY7 148 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 AIDAQ96BJ3 306 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 FAM227BQ96M60 508 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 DSCC1Q9BVC3 393 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 ATP8A2Q9NTI2 1148 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 PPP2R3BQ9Y5P8 575 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 CCDC171Q6TFL3 1326 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 ATRNL1Q5VV63 1379 aa13.54□□□□□ -0.24
MSH5-214ENST00000468602 SHTN1A0MZ66 631 aa13.53□□□□□ -0.24
MSH5-214ENST00000468602 PATL2C9JE40 543 aaKnown RBP13.53□□□□□ -0.24
MSH5-214ENST00000468602 F8W031 263 aaPredicted RBP13.53□□□□□ -0.24
MSH5-214ENST00000468602 M0R2C6 588 aa13.53□□□□□ -0.24
MSH5-214ENST00000468602 FOXP2O15409 715 aa13.53□□□□□ -0.24
MSH5-214ENST00000468602 MYO1BO43795 1136 aa13.53□□□□□ -0.24
MSH5-214ENST00000468602 EGFRP00533 1210 aa13.53□□□□□ -0.24
MSH5-214ENST00000468602 CHGBP05060 677 aa13.53□□□□□ -0.24
MSH5-214ENST00000468602 C8orf34Q49A92 452 aa13.53□□□□□ -0.24
MSH5-214ENST00000468602 TNS4Q8IZW8 715 aa13.53□□□□□ -0.24
MSH5-214ENST00000468602 TRPM4Q8TD43 1214 aa13.53□□□□□ -0.24
MSH5-214ENST00000468602 NOL10Q9BSC4 688 aaKnown RBP13.53□□□□□ -0.24
MSH5-214ENST00000468602 CRNKL1Q9BZJ0 848 aaKnown RBP13.53□□□□□ -0.24
MSH5-214ENST00000468602 ZNF70Q9UC06 446 aaPredicted RBP13.53□□□□□ -0.24
MSH5-214ENST00000468602 GSG1L2A8MUP6 293 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 MBD4O95243 580 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 NT5C2P49902 561 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 MAP3K10Q02779 954 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 TNFAIP1Q13829 316 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 NBPF9Q3BBW0 867 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 SBK1Q52WX2 424 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 CWC27Q6UX04 472 aaKnown RBP13.52□□□□□ -0.25
MSH5-214ENST00000468602 SAMD7Q7Z3H4 446 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 ZNF589Q86UQ0 364 aaPredicted RBP13.52□□□□□ -0.25
MSH5-214ENST00000468602 METTL16Q86W50 562 aaKnown RBP13.52□□□□□ -0.25
MSH5-214ENST00000468602 LCORLQ8N3X6 602 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 MAP4K1Q92918 833 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 IL25Q9H293 177 aa13.52□□□□□ -0.25
MSH5-214ENST00000468602 AATFQ9NY61 560 aaKnown RBP eCLIP13.52□□□□□ -0.25
MSH5-214ENST00000468602 HSPD1P10809 573 aaKnown RBP13.51□□□□□ -0.25
MSH5-214ENST00000468602 SLFNL1Q499Z3 407 aa13.51□□□□□ -0.25
MSH5-214ENST00000468602 APOBEC3FQ8IUX4 373 aaKnown RBP13.51□□□□□ -0.25
MSH5-214ENST00000468602 FAM151AQ8WW52 585 aa13.51□□□□□ -0.25
MSH5-214ENST00000468602 IL17RAQ96F46 866 aa13.51□□□□□ -0.25
MSH5-214ENST00000468602 SEC62Q99442 399 aaKnown RBP13.51□□□□□ -0.25
MSH5-214ENST00000468602 DHX36Q9H2U1 1008 aaKnown RBP13.51□□□□□ -0.25
MSH5-214ENST00000468602 DCP1AQ9NPI6 582 aaPredicted RBP13.51□□□□□ -0.25
MSH5-214ENST00000468602 USP40Q9NVE5 1235 aa13.51□□□□□ -0.25
MSH5-214ENST00000468602 PCDHAC2Q9Y5I4 1007 aa13.51□□□□□ -0.25
MSH5-214ENST00000468602 REC8O95072 547 aa13.5□□□□□ -0.25
MSH5-214ENST00000468602 APLP1P51693 650 aa13.5□□□□□ -0.25
MSH5-214ENST00000468602 DYNLL1P63167 89 aaKnown RBP13.5□□□□□ -0.25
MSH5-214ENST00000468602 TBC1D10BQ4KMP7 808 aaPredicted RBP13.5□□□□□ -0.25
MSH5-214ENST00000468602 DNAJC5GQ8N7S2 189 aa13.5□□□□□ -0.25
MSH5-214ENST00000468602 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
MSH5-214ENST00000468602 SH3RF3Q8TEJ3 882 aaPredicted RBP13.5□□□□□ -0.25
MSH5-214ENST00000468602 LSG1Q9H089 658 aaKnown RBP13.5□□□□□ -0.25
MSH5-214ENST00000468602 TDRD3Q9H7E2 651 aaKnown RBP13.5□□□□□ -0.25
MSH5-214ENST00000468602 ARMT1Q9H993 441 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms