RNA–Protein interactions for RNA: ENST00000468516.1

FOXN4-204, Transcript of forkhead box N4, humanhuman

TSL 2

Gene FOXN4, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-204ENST00000468516 RCOR1Q9UKL0 485 aa15.27■□□□□ 0.03
FOXN4-204ENST00000468516 BRWD3Q6RI45 1802 aa15.26■□□□□ 0.03
FOXN4-204ENST00000468516 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
FOXN4-204ENST00000468516 GYG1P46976 350 aa15.26■□□□□ 0.03
FOXN4-204ENST00000468516 APOA5Q6Q788 366 aa15.26■□□□□ 0.03
FOXN4-204ENST00000468516 SEPT12Q8IYM1 358 aa15.26■□□□□ 0.03
FOXN4-204ENST00000468516 ZNF396Q96N95 335 aaPredicted RBP15.26■□□□□ 0.03
FOXN4-204ENST00000468516 LY9Q9HBG7 655 aa15.26■□□□□ 0.03
FOXN4-204ENST00000468516 STK36Q9NRP7 1315 aa15.25■□□□□ 0.03
FOXN4-204ENST00000468516 LRRC37AA6NMS7 1700 aa15.25■□□□□ 0.03
FOXN4-204ENST00000468516 B4E1Z4 1266 aa15.25■□□□□ 0.03
FOXN4-204ENST00000468516 CDKL5O76039 1030 aa15.25■□□□□ 0.03
FOXN4-204ENST00000468516 CYP7A1P22680 504 aa15.25■□□□□ 0.03
FOXN4-204ENST00000468516 TRAPPC3LQ5T215 181 aa15.25■□□□□ 0.03
FOXN4-204ENST00000468516 GIMAP6Q6P9H5 292 aa15.25■□□□□ 0.03
FOXN4-204ENST00000468516 RIOK1Q9BRS2 568 aaKnown RBP15.25■□□□□ 0.03
FOXN4-204ENST00000468516 RNF41Q9H4P4 317 aaPredicted RBP15.25■□□□□ 0.03
FOXN4-204ENST00000468516 SLC4A4Q9Y6R1 1079 aa15.25■□□□□ 0.03
FOXN4-204ENST00000468516 PCP11498 1178 aaKnown RBP15.24■□□□□ 0.03
FOXN4-204ENST00000468516 RFC4P35249 363 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 SLC27A3Q5K4L6 730 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 FBXO18Q8NFZ0 1043 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 NKX2-3Q8TAU0 364 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 TRIM44Q96DX7 344 aaPredicted RBP15.24■□□□□ 0.03
FOXN4-204ENST00000468516 PGBD1Q96JS3 809 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 BRIP1Q9BX63 1249 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 NAP1L2Q9ULW6 460 aaPredicted RBP15.24■□□□□ 0.03
FOXN4-204ENST00000468516 TACC3Q9Y6A5 838 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 MAGEB6P1A0A0J9YX57 407 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 CPLX1O14810 134 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 LIG1P18858 919 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 HMGB2P26583 209 aaKnown RBP15.24■□□□□ 0.03
FOXN4-204ENST00000468516 HSPA1LP34931 641 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 TDO2P48775 406 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 METAP2P50579 478 aaKnown RBP eCLIP15.24■□□□□ 0.03
FOXN4-204ENST00000468516 C15orf52Q6ZUT6 534 aaKnown RBP15.24■□□□□ 0.03
FOXN4-204ENST00000468516 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 BRAPQ7Z569 592 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 ILDR1Q86SU0 546 aaPredicted RBP15.24■□□□□ 0.03
FOXN4-204ENST00000468516 NUP62CLQ9H1M0 184 aa15.24■□□□□ 0.03
FOXN4-204ENST00000468516 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
FOXN4-204ENST00000468516 TFIP11Q9UBB9 837 aaKnown RBP15.24■□□□□ 0.03
FOXN4-204ENST00000468516 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
FOXN4-204ENST00000468516 PRKAB2O43741 272 aa15.23■□□□□ 0.03
FOXN4-204ENST00000468516 FAM182BQ5T319 152 aa15.23■□□□□ 0.03
FOXN4-204ENST00000468516 CPLX2Q6PUV4 134 aaKnown RBP15.23■□□□□ 0.03
FOXN4-204ENST00000468516 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
FOXN4-204ENST00000468516 MFSD6Q6ZSS7 791 aa15.23■□□□□ 0.03
FOXN4-204ENST00000468516 ADGRA1Q86SQ6 560 aa15.23■□□□□ 0.03
FOXN4-204ENST00000468516 C8orf76Q96K31 380 aa15.23■□□□□ 0.03
FOXN4-204ENST00000468516 CLSTN2Q9H4D0 955 aa15.23■□□□□ 0.03
FOXN4-204ENST00000468516 RRAGDQ9NQL2 400 aaPredicted RBP15.23■□□□□ 0.03
FOXN4-204ENST00000468516 LRRC4BQ9NT99 713 aa15.23■□□□□ 0.03
FOXN4-204ENST00000468516 GOLGA6L4A6NEF3 574 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 ZBTB43O43298 467 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 FGRP09769 529 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 HIBADHP31937 336 aaKnown RBP15.22■□□□□ 0.03
FOXN4-204ENST00000468516 CTDSPL2Q05D32 466 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 PPARAQ07869 468 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 GRAPQ13588 217 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 NFIXQ14938 502 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 NTRK3Q16288 839 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 TMEM67Q5HYA8 995 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 VPS37DQ86XT2 251 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 TMTC2Q8N394 836 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 GRAPLQ8TC17 118 aaPredicted RBP15.22■□□□□ 0.03
FOXN4-204ENST00000468516 RTEL1Q9NZ71 1219 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 RAI14Q9P0K7 980 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 ZSWIM5Q9P217 1185 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 LEMD3Q9Y2U8 911 aa15.22■□□□□ 0.03
FOXN4-204ENST00000468516 BAZ2AQ9UIF9 1905 aaKnown RBP15.21■□□□□ 0.03
FOXN4-204ENST00000468516 ESPNB1AK53 854 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 KDM4AO75164 1064 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 CLCN1P35523 988 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 MAP3K11Q16584 847 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 CRY2Q49AN0 593 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 MIGA1Q8NAN2 632 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 ZNF384Q8TF68 577 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 NSUN4Q96CB9 384 aaKnown RBP15.21■□□□□ 0.03
FOXN4-204ENST00000468516 USP28Q96RU2 1077 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 POLR3EQ9NVU0 708 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 ABCF2Q9UG63 623 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 LTBP1Q14766 1721 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 NRXN2Q9P2S2 1712 aa15.21■□□□□ 0.03
FOXN4-204ENST00000468516 WTIPA6NIX2 430 aaPredicted RBP15.2■□□□□ 0.02
FOXN4-204ENST00000468516 IFIT3O14879 490 aaKnown RBP15.2■□□□□ 0.02
FOXN4-204ENST00000468516 YEATS4O95619 227 aa15.2■□□□□ 0.02
FOXN4-204ENST00000468516 CCDC192P0DO97 292 aa15.2■□□□□ 0.02
FOXN4-204ENST00000468516 NT5C2P49902 561 aa15.2■□□□□ 0.02
FOXN4-204ENST00000468516 SART3Q15020 963 aaKnown RBP15.2■□□□□ 0.02
FOXN4-204ENST00000468516 CNBD1Q8NA66 436 aa15.2■□□□□ 0.02
FOXN4-204ENST00000468516 FAM217BQ9NTX9 383 aaPredicted RBP15.2■□□□□ 0.02
FOXN4-204ENST00000468516 DACT1Q9NYF0 836 aa15.2■□□□□ 0.02
FOXN4-204ENST00000468516 IQSEC3Q9UPP2 1182 aaPredicted RBP15.2■□□□□ 0.02
FOXN4-204ENST00000468516 GOLGA8AA7E2F4 631 aa15.19■□□□□ 0.02
FOXN4-204ENST00000468516 KLRK1P26718 216 aa15.19■□□□□ 0.02
FOXN4-204ENST00000468516 CDC27P30260 824 aa15.19■□□□□ 0.02
FOXN4-204ENST00000468516 KIF23Q02241 960 aaPredicted RBP15.19■□□□□ 0.02
FOXN4-204ENST00000468516 CCDC69A6NI79 296 aa15.19■□□□□ 0.02
FOXN4-204ENST00000468516 CTAGE5O15320 804 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms