RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 DPEP1P16444 411 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 ZKSCAN1P17029 563 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-208ENST00000468300 DPP8Q6V1X1 898 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-208ENST00000468300 TBC1D10CQ8IV04 446 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 ZGPATQ8N5A5 531 aaKnown RBP9.84□□□□□ -0.83
BRCA1-208ENST00000468300 CERS5Q8N5B7 392 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 TCEANC2Q96MN5 208 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 KCNQ5Q9NR82 932 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 C6orf229H3BNL8 230 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 RNF20Q5VTR2 975 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 IFNL3Q8IZI9 196 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 IL27Q8NEV9 243 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 MTFR1LQ9H019 292 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 RAI14Q9P0K7 980 aa9.84□□□□□ -0.83
BRCA1-208ENST00000468300 ATF5Q9Y2D1 282 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-208ENST00000468300 EVX2Q03828 476 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 CNKSR1Q969H4 720 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 AIDAQ96BJ3 306 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 NEK1Q96PY6 1258 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 AGXT2Q9BYV1 514 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 PDRG1Q9NUG6 133 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 TPCN1Q9ULQ1 816 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 ECM29Q5VYK3 1845 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 HAND2P61296 217 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 WDR66Q8TBY9 1149 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 COA1Q9GZY4 146 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 INCENPQ9NQS7 918 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 FOXD4L1Q9NU39 408 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 MKRN1Q9UHC7 482 aaKnown RBP9.83□□□□□ -0.84
BRCA1-208ENST00000468300 CYP46A1Q9Y6A2 500 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 ANTXR2P58335 489 aa9.83□□□□□ -0.84
BRCA1-208ENST00000468300 NAA16Q6N069 864 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-208ENST00000468300 NAV1Q8NEY1 1877 aa9.82□□□□□ -0.84
BRCA1-208ENST00000468300 MAGEB6P1A0A0J9YX57 407 aa9.82□□□□□ -0.84
BRCA1-208ENST00000468300 MCM2P49736 904 aa9.82□□□□□ -0.84
BRCA1-208ENST00000468300 DOK7Q18PE1 504 aa9.82□□□□□ -0.84
BRCA1-208ENST00000468300 MB21D2Q8IYB1 491 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-208ENST00000468300 SDR42E1Q8WUS8 393 aa9.82□□□□□ -0.84
BRCA1-208ENST00000468300 MXD3Q9BW11 206 aa9.82□□□□□ -0.84
BRCA1-208ENST00000468300 FRAT2O75474 233 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-208ENST00000468300 KRT32Q14532 448 aa9.82□□□□□ -0.84
BRCA1-208ENST00000468300 DIXDC1Q155Q3 683 aa9.82□□□□□ -0.84
BRCA1-208ENST00000468300 ME3Q16798 604 aa9.82□□□□□ -0.84
BRCA1-208ENST00000468300 NOL8Q76FK4 1167 aaKnown RBP9.82□□□□□ -0.84
BRCA1-208ENST00000468300 SLC4A4Q9Y6R1 1079 aa9.82□□□□□ -0.84
BRCA1-208ENST00000468300 C21orf2O43822 256 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 PSMA5P28066 241 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 FOXD4L5Q5VV16 416 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-208ENST00000468300 BLOC1S2Q6QNY1 142 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 FBXL16Q8N461 479 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 FOXD4L4Q8WXT5 416 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-208ENST00000468300 ZNF219Q9P2Y4 722 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-208ENST00000468300 LIMCH1Q9UPQ0 1083 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 NEDD4P46934 1319 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 RAD21O60216 631 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 AATFQ9NY61 560 aaKnown RBP eCLIP9.81□□□□□ -0.84
BRCA1-208ENST00000468300 CTNNA3Q9UI47 895 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 SRCAPQ6ZRS2 3230 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 PSDA5PKW4 1024 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-208ENST00000468300 LDHBP07195 334 aaKnown RBP9.81□□□□□ -0.84
BRCA1-208ENST00000468300 GNAT2P19087 354 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 PKP1Q13835 747 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 IMMTQ16891 758 aaKnown RBP9.81□□□□□ -0.84
BRCA1-208ENST00000468300 TTLL6Q8N841 843 aa9.81□□□□□ -0.84
BRCA1-208ENST00000468300 GPHNQ9NQX3 736 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-208ENST00000468300 GAKO14976 1311 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 YDJCA8MPS7 323 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 TGFB2P61812 414 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 GTF2IP78347 998 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 CTDSPL2Q05D32 466 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 MFSD14BQ5SR56 506 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 Q6ZUG5 572 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 CYB5R4Q7L1T6 521 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 DHX32Q7L7V1 743 aaKnown RBP9.8□□□□□ -0.84
BRCA1-208ENST00000468300 FAM163AQ96GL9 167 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-208ENST00000468300 LRRC2Q9BYS8 371 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 ZC3H12CQ9C0D7 883 aaKnown RBP9.8□□□□□ -0.84
BRCA1-208ENST00000468300 DBNDD1Q9H9R9 158 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-208ENST00000468300 ANAPC4Q9UJX5 808 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 ZDHHC9Q9Y397 364 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 ARFGEF1Q9Y6D6 1849 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 MROH7-TTC4A0A0A0MT08 1334 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 ZNF213O14771 459 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 DTNBO60941 627 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 PPP4CP60510 307 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 AOC3Q16853 763 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 SPTY2D1Q68D10 685 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-208ENST00000468300 CTR9Q6PD62 1173 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 CHST3Q7LGC8 479 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 INTS4Q96HW7 963 aaKnown RBP9.8□□□□□ -0.84
BRCA1-208ENST00000468300 EVCP57679 992 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 RHBDL3P58872 404 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 KIAA2012Q0VF49 1180 aa9.8□□□□□ -0.84
BRCA1-208ENST00000468300 SH3RF3Q8TEJ3 882 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-208ENST00000468300 DCP1AQ9NPI6 582 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-208ENST00000468300 CYP2D7A0A087X1C5 515 aa9.79□□□□□ -0.84
BRCA1-208ENST00000468300 GPR75-ASB3A0A0A6YYF3 556 aa9.79□□□□□ -0.84
BRCA1-208ENST00000468300 FGRP09769 529 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms