RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 ELOA2Q8IYF1 753 aaPredicted RBP16.77■□□□□ 0.27
SEC16A-208ENST00000467838 JMYQ8N9B5 988 aa16.77■□□□□ 0.27
SEC16A-208ENST00000467838 NBPF3Q9H094 633 aa16.77■□□□□ 0.27
SEC16A-208ENST00000467838 SHANK3Q9BYB0 1731 aa16.76■□□□□ 0.27
SEC16A-208ENST00000467838 BIN1O00499 593 aa16.76■□□□□ 0.27
SEC16A-208ENST00000467838 SYKP43405 635 aa16.76■□□□□ 0.27
SEC16A-208ENST00000467838 FKBP4Q02790 459 aaKnown RBP eCLIP16.76■□□□□ 0.27
SEC16A-208ENST00000467838 WASHC4Q2M389 1173 aa16.76■□□□□ 0.27
SEC16A-208ENST00000467838 RESP18Q5W5W9 173 aa16.76■□□□□ 0.27
SEC16A-208ENST00000467838 MAP3K14Q99558 947 aa16.76■□□□□ 0.27
SEC16A-208ENST00000467838 PUS7LQ9H0K6 701 aaKnown RBP16.76■□□□□ 0.27
SEC16A-208ENST00000467838 COL5A2P05997 1499 aaPredicted RBP16.76■□□□□ 0.27
SEC16A-208ENST00000467838 GPAA1O43292 621 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 CDKL5O76039 1030 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 SCARF1Q14162 830 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 SHC4Q6S5L8 630 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 ZNF771Q7L3S4 317 aaPredicted RBP16.75■□□□□ 0.27
SEC16A-208ENST00000467838 VPS37DQ86XT2 251 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 VSTM4Q8IW00 320 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 SRRTQ9BXP5 876 aaKnown RBP16.75■□□□□ 0.27
SEC16A-208ENST00000467838 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.75■□□□□ 0.27
SEC16A-208ENST00000467838 GJB4Q9NTQ9 266 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 ANGEL1Q9UNK9 670 aaKnown RBP16.75■□□□□ 0.27
SEC16A-208ENST00000467838 TIAM2Q8IVF5 1701 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 ERVV-2B6SEH9 535 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 SH2B2O14492 632 aaPredicted RBP16.75■□□□□ 0.27
SEC16A-208ENST00000467838 ATP1A3P13637 1013 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 LMOD1P29536 600 aaPredicted RBP16.75■□□□□ 0.27
SEC16A-208ENST00000467838 TRIM28Q13263 835 aaKnown RBP16.75■□□□□ 0.27
SEC16A-208ENST00000467838 TRIM65Q6PJ69 517 aa16.75■□□□□ 0.27
SEC16A-208ENST00000467838 ZNF512BQ96KM6 892 aaPredicted RBP16.75■□□□□ 0.27
SEC16A-208ENST00000467838 WDR17Q8IZU2 1322 aa16.74■□□□□ 0.27
SEC16A-208ENST00000467838 PCDH11XQ9BZA7 1347 aa16.74■□□□□ 0.27
SEC16A-208ENST00000467838 PCDH11YQ9BZA8 1340 aa16.74■□□□□ 0.27
SEC16A-208ENST00000467838 ZNF213O14771 459 aa16.74■□□□□ 0.27
SEC16A-208ENST00000467838 ZAP70P43403 619 aa16.74■□□□□ 0.27
SEC16A-208ENST00000467838 ERCC6LQ2NKX8 1250 aa16.74■□□□□ 0.27
SEC16A-208ENST00000467838 LRRN4CLQ8ND94 238 aa16.74■□□□□ 0.27
SEC16A-208ENST00000467838 NID2Q14112 1375 aa16.74■□□□□ 0.27
SEC16A-208ENST00000467838 STK36Q9NRP7 1315 aa16.74■□□□□ 0.27
SEC16A-208ENST00000467838 BMS1Q14692 1282 aaKnown RBP16.73■□□□□ 0.27
SEC16A-208ENST00000467838 CCDC57Q2TAC2 916 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 KRT40Q6A162 431 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 ALG1Q9BT22 464 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 ZBTB3Q9H5J0 574 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 CUTAO60888 179 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 IGSF3O75054 1194 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 A1BGP04217 495 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 CSF1RP07333 972 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
SEC16A-208ENST00000467838 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 TMEM139Q8IV31 216 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 REXO1L1PQ8IX06 675 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 FHOD1Q9Y613 1164 aa16.73■□□□□ 0.27
SEC16A-208ENST00000467838 ARAP2Q8WZ64 1704 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 LRP5O75197 1615 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 MARCKSP29966 332 aaPredicted RBP16.72■□□□□ 0.27
SEC16A-208ENST00000467838 ADD2P35612 726 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 METAP2P50579 478 aaKnown RBP eCLIP16.72■□□□□ 0.27
SEC16A-208ENST00000467838 CLCN6P51797 869 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 UBASH3AP57075 661 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 GORABQ5T7V8 394 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 APOA5Q6Q788 366 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 METTL16Q86W50 562 aaKnown RBP16.72■□□□□ 0.27
SEC16A-208ENST00000467838 TBC1D10CQ8IV04 446 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 DPF2Q92785 391 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.72■□□□□ 0.274e-7■■□□□ 13.8
SEC16A-208ENST00000467838 STRN4Q9NRL3 753 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 DNAI1Q9UI46 699 aa16.72■□□□□ 0.27
SEC16A-208ENST00000467838 CHD4Q14839 1912 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 FANCGO15287 622 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 TADA3O75528 432 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 ZRANB2O95218 330 aaKnown RBP eCLIP16.71■□□□□ 0.27
SEC16A-208ENST00000467838 PCCAP05165 728 aaPredicted RBP16.71■□□□□ 0.27
SEC16A-208ENST00000467838 TCIRG1Q13488 830 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 NTRK3Q16288 839 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 SGMS1Q86VZ5 419 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 EVA1CP58658 441 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 TRDNQ13061 729 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 TBX2Q13207 712 aaPredicted RBP16.71■□□□□ 0.27
SEC16A-208ENST00000467838 KRBA2Q6ZNG9 492 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 CYB5R4Q7L1T6 521 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 RAB11FIP4Q86YS3 637 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 AIFM3Q96NN9 605 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 INTS13Q9NVM9 706 aa16.71■□□□□ 0.27
SEC16A-208ENST00000467838 MYH3P11055 1940 aa16.7■□□□□ 0.26
SEC16A-208ENST00000467838 ARHGAP6O43182 974 aa16.7■□□□□ 0.26
SEC16A-208ENST00000467838 PNOCQ13519 176 aa16.7■□□□□ 0.26
SEC16A-208ENST00000467838 ARHGAP29Q52LW3 1261 aa16.7■□□□□ 0.26
SEC16A-208ENST00000467838 CPLX2Q6PUV4 134 aaKnown RBP16.7■□□□□ 0.26
SEC16A-208ENST00000467838 CERKQ8TCT0 537 aa16.7■□□□□ 0.26
SEC16A-208ENST00000467838 PARP3Q9Y6F1 533 aa16.7■□□□□ 0.26
SEC16A-208ENST00000467838 TOGARAM1Q9Y4F4 1720 aa16.7■□□□□ 0.26
SEC16A-208ENST00000467838 MYO5AQ9Y4I1 1855 aaKnown RBP16.7■□□□□ 0.26
SEC16A-208ENST00000467838 COL14A1Q05707 1796 aaKnown RBP16.7■□□□□ 0.26
SEC16A-208ENST00000467838 DOCK2Q92608 1830 aa16.7■□□□□ 0.26
SEC16A-208ENST00000467838 ZSCAN12O43309 604 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 MCAMP43121 646 aa16.69■□□□□ 0.26
SEC16A-208ENST00000467838 UBE3CQ15386 1083 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 318.9 ms