RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 HIP1O00291 1037 aa20.6■□□□□ 0.89
VARS2-204ENST00000467717 CHGBP05060 677 aa20.6■□□□□ 0.89
VARS2-204ENST00000467717 BTDP43251 543 aa20.6■□□□□ 0.89
VARS2-204ENST00000467717 HIRAP54198 1017 aaPredicted RBP20.6■□□□□ 0.89
VARS2-204ENST00000467717 APPBP2Q92624 585 aa20.6■□□□□ 0.89
VARS2-204ENST00000467717 NOL10Q9BSC4 688 aaKnown RBP20.6■□□□□ 0.89
VARS2-204ENST00000467717 MYO1BO43795 1136 aa20.59■□□□□ 0.89
VARS2-204ENST00000467717 PPP4CP60510 307 aa20.59■□□□□ 0.89
VARS2-204ENST00000467717 NBPF9Q3BBW0 867 aa20.59■□□□□ 0.89
VARS2-204ENST00000467717 SLFNL1Q499Z3 407 aa20.59■□□□□ 0.89
VARS2-204ENST00000467717 CERS3Q8IU89 383 aa20.59■□□□□ 0.89
VARS2-204ENST00000467717 AATFQ9NY61 560 aaKnown RBP eCLIP20.59■□□□□ 0.89
VARS2-204ENST00000467717 MYH13Q9UKX3 1938 aa20.59■□□□□ 0.89
VARS2-204ENST00000467717 HTRA3P83110 453 aa20.58■□□□□ 0.89
VARS2-204ENST00000467717 EAPPQ56P03 285 aaPredicted RBP20.58■□□□□ 0.89
VARS2-204ENST00000467717 ZMYM1Q5SVZ6 1142 aa20.58■□□□□ 0.89
VARS2-204ENST00000467717 MIGA1Q8NAN2 632 aa20.58■□□□□ 0.89
VARS2-204ENST00000467717 DIAPH3Q9NSV4 1193 aa20.58■□□□□ 0.89
VARS2-204ENST00000467717 MAGEB6P1A0A0J9YX57 407 aa20.57■□□□□ 0.88
VARS2-204ENST00000467717 RBM46Q8TBY0 533 aaKnown RBP20.57■□□□□ 0.88
VARS2-204ENST00000467717 ZC3H15Q8WU90 426 aaKnown RBP20.57■□□□□ 0.88
VARS2-204ENST00000467717 OSBP2Q969R2 916 aa20.57■□□□□ 0.88
VARS2-204ENST00000467717 USP40Q9NVE5 1235 aa20.57■□□□□ 0.88
VARS2-204ENST00000467717 PLCG2P16885 1265 aa20.56■□□□□ 0.88
VARS2-204ENST00000467717 SPDYE2Q495Y8 402 aa20.56■□□□□ 0.88
VARS2-204ENST00000467717 CDC42EP5Q6NZY7 148 aa20.56■□□□□ 0.88
VARS2-204ENST00000467717 AIDAQ96BJ3 306 aa20.56■□□□□ 0.88
VARS2-204ENST00000467717 RIOK1Q9BRS2 568 aaKnown RBP20.56■□□□□ 0.88
VARS2-204ENST00000467717 PUS7LQ9H0K6 701 aaKnown RBP20.56■□□□□ 0.88
VARS2-204ENST00000467717 TDRD3Q9H7E2 651 aaKnown RBP20.56■□□□□ 0.88
VARS2-204ENST00000467717 HELLSQ9NRZ9 838 aa20.56■□□□□ 0.88
VARS2-204ENST00000467717 CHMLP26374 656 aa20.55■□□□□ 0.88
VARS2-204ENST00000467717 RHBDL3P58872 404 aa20.55■□□□□ 0.88
VARS2-204ENST00000467717 DYNLL1P63167 89 aaKnown RBP20.55■□□□□ 0.88
VARS2-204ENST00000467717 NMIQ13287 307 aaPredicted RBP20.55■□□□□ 0.88
VARS2-204ENST00000467717 FAM227BQ96M60 508 aa20.55■□□□□ 0.88
VARS2-204ENST00000467717 TMOD2Q9NZR1 351 aa20.55■□□□□ 0.88
VARS2-204ENST00000467717 ZNF70Q9UC06 446 aaPredicted RBP20.55■□□□□ 0.88
VARS2-204ENST00000467717 CLRN2A0PK11 232 aa20.54■□□□□ 0.88
VARS2-204ENST00000467717 MBD4O95243 580 aa20.54■□□□□ 0.88
VARS2-204ENST00000467717 ANGEL2Q5VTE6 544 aaKnown RBP20.54■□□□□ 0.88
VARS2-204ENST00000467717 SH3RF3Q8TEJ3 882 aaPredicted RBP20.54■□□□□ 0.88
VARS2-204ENST00000467717 SEC62Q99442 399 aaKnown RBP20.54■□□□□ 0.88
VARS2-204ENST00000467717 GGA3Q9NZ52 723 aa20.54■□□□□ 0.88
VARS2-204ENST00000467717 PGAP2Q9UHJ9 254 aa20.54■□□□□ 0.88
VARS2-204ENST00000467717 ASTN2O75129 1339 aaPredicted RBP20.53■□□□□ 0.88
VARS2-204ENST00000467717 PCNTO95613 3336 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 A0A0D9SFI3 127 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 M0R2C6 588 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 CDC45O75419 566 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 MCMDC2Q4G0Z9 681 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 CWC27Q6UX04 472 aaKnown RBP20.53■□□□□ 0.88
VARS2-204ENST00000467717 LDHDQ86WU2 507 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 TEX11Q8IYF3 940 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 LCORLQ8N3X6 602 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 ARMT1Q9H993 441 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 VEZTQ9HBM0 779 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 CLEC11AQ9Y240 323 aa20.53■□□□□ 0.88
VARS2-204ENST00000467717 GPAA1O43292 621 aa20.52■□□□□ 0.88
VARS2-204ENST00000467717 FKBP1CQ5VVH2 108 aa20.52■□□□□ 0.88
VARS2-204ENST00000467717 CASC1Q6TDU7 716 aa20.52■□□□□ 0.88
VARS2-204ENST00000467717 RUFY2Q8WXA3 655 aa20.52■□□□□ 0.88
VARS2-204ENST00000467717 DCPSQ96C86 337 aaKnown RBP20.52■□□□□ 0.88
VARS2-204ENST00000467717 STRBPQ96SI9 672 aaKnown RBP20.52■□□□□ 0.88
VARS2-204ENST00000467717 IDI2Q9BXS1 227 aa20.52■□□□□ 0.88
VARS2-204ENST00000467717 CRNKL1Q9BZJ0 848 aaKnown RBP20.52■□□□□ 0.88
VARS2-204ENST00000467717 SCN4AP35499 1836 aa20.52■□□□□ 0.88
VARS2-204ENST00000467717 DOCK2Q92608 1830 aa20.52■□□□□ 0.88
VARS2-204ENST00000467717 PITPNM2Q9BZ72 1349 aa20.52■□□□□ 0.87
VARS2-204ENST00000467717 WDHD1O75717 1129 aaPredicted RBP20.51■□□□□ 0.87
VARS2-204ENST00000467717 POTEIP0CG38 1075 aa20.51■□□□□ 0.87
VARS2-204ENST00000467717 POTEJP0CG39 1038 aa20.51■□□□□ 0.87
VARS2-204ENST00000467717 CACNB3P54284 484 aa20.51■□□□□ 0.87
VARS2-204ENST00000467717 FSTL1Q12841 308 aa20.51■□□□□ 0.87
VARS2-204ENST00000467717 APOBEC3FQ8IUX4 373 aaKnown RBP20.51■□□□□ 0.87
VARS2-204ENST00000467717 MAST2Q6P0Q8 1798 aa20.5■□□□□ 0.87
VARS2-204ENST00000467717 NPM3O75607 178 aaKnown RBP20.5■□□□□ 0.87
VARS2-204ENST00000467717 GNAT2P19087 354 aa20.5■□□□□ 0.87
VARS2-204ENST00000467717 NFIAQ12857 509 aa20.5■□□□□ 0.87
VARS2-204ENST00000467717 TNFAIP1Q13829 316 aa20.5■□□□□ 0.87
VARS2-204ENST00000467717 RAD50Q92878 1312 aa20.5■□□□□ 0.87
VARS2-204ENST00000467717 TCP10L2B9ZVM9 353 aa20.49■□□□□ 0.87
VARS2-204ENST00000467717 TNNI2P48788 182 aa20.49■□□□□ 0.87
VARS2-204ENST00000467717 MFAP1P55081 439 aaKnown RBP20.49■□□□□ 0.87
VARS2-204ENST00000467717 CCDC129Q6ZRS4 1044 aa20.49■□□□□ 0.87
VARS2-204ENST00000467717 SULF1Q8IWU6 871 aa20.49■□□□□ 0.87
VARS2-204ENST00000467717 TGFBRAP1Q8WUH2 860 aa20.49■□□□□ 0.87
VARS2-204ENST00000467717 ENTPD3O75355 529 aa20.48■□□□□ 0.87
VARS2-204ENST00000467717 USP5P45974 858 aa20.48■□□□□ 0.87
VARS2-204ENST00000467717 PICALMQ13492 652 aa20.48■□□□□ 0.87
VARS2-204ENST00000467717 CDC37L1Q7L3B6 337 aa20.48■□□□□ 0.87
VARS2-204ENST00000467717 ZNF589Q86UQ0 364 aaPredicted RBP20.48■□□□□ 0.87
VARS2-204ENST00000467717 FAM83AQ86UY5 434 aa20.48■□□□□ 0.87
VARS2-204ENST00000467717 FAM198AQ9UFP1 575 aa20.48■□□□□ 0.87
VARS2-204ENST00000467717 SLC4A4Q9Y6R1 1079 aa20.48■□□□□ 0.87
VARS2-204ENST00000467717 CCDC171Q6TFL3 1326 aa20.48■□□□□ 0.87
VARS2-204ENST00000467717 SGSM2O43147 1006 aa20.47■□□□□ 0.87
VARS2-204ENST00000467717 PRKAB2O43741 272 aa20.47■□□□□ 0.87
VARS2-204ENST00000467717 RASA3Q14644 834 aa20.47■□□□□ 0.87
VARS2-204ENST00000467717 KRT26Q7Z3Y9 468 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms