RNA–Protein interactions for RNA: ENST00000467350.1

RERE-209, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-209ENST00000467350 ZKSCAN2Q63HK3 967 aa12.81□□□□□ -0.36
RERE-209ENST00000467350 CCDC102BQ68D86 513 aa12.81□□□□□ -0.36
RERE-209ENST00000467350 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.81□□□□□ -0.36
RERE-209ENST00000467350 ZFYVE28Q9HCC9 887 aa12.81□□□□□ -0.36
RERE-209ENST00000467350 USP40Q9NVE5 1235 aa12.81□□□□□ -0.36
RERE-209ENST00000467350 HPS5Q9UPZ3 1129 aa12.81□□□□□ -0.36
RERE-209ENST00000467350 PA2G4Q9UQ80 394 aaKnown RBP12.81□□□□□ -0.36
RERE-209ENST00000467350 IGF2BP3O00425 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
RERE-209ENST00000467350 TRIM27P14373 513 aa12.8□□□□□ -0.36
RERE-209ENST00000467350 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
RERE-209ENST00000467350 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
RERE-209ENST00000467350 WRNIP1Q96S55 665 aa12.8□□□□□ -0.36
RERE-209ENST00000467350 ZNF341Q9BYN7 854 aa12.8□□□□□ -0.36
RERE-209ENST00000467350 POLR2AP24928 1970 aaKnown RBP12.8□□□□□ -0.36
RERE-209ENST00000467350 CCL15-CCL14A0A0B4J2E2 113 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 A0A1B0GUL7 405 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 SPDYE5A6NIY4 337 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 PHKA1P46020 1223 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 SP3Q02447 781 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 PPATQ06203 517 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 SNAPC2Q13487 334 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 CCL15Q16663 113 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 CDC42EP5Q6NZY7 148 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 DZIP1Q86YF9 867 aaKnown RBP12.79□□□□□ -0.36
RERE-209ENST00000467350 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 R3HDMLQ9H3Y0 253 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 ABCF2Q9UG63 623 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 DAGLAQ9Y4D2 1042 aa12.79□□□□□ -0.36
RERE-209ENST00000467350 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
RERE-209ENST00000467350 LDHCP07864 332 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 PRDX5P30044 214 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 GJA5P36382 358 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 GSTO1P78417 241 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 TFCP2Q12800 502 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 CRHR2Q13324 411 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 DIXDC1Q155Q3 683 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 MIGA2Q7L4E1 593 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 FTSJ3Q8IY81 847 aaKnown RBP12.78□□□□□ -0.36
RERE-209ENST00000467350 FAM163AQ96GL9 167 aaPredicted RBP12.78□□□□□ -0.36
RERE-209ENST00000467350 XAGE2Q96GT9 111 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 PTPN18Q99952 460 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 ZCCHC17Q9NP64 241 aaKnown RBP12.78□□□□□ -0.36
RERE-209ENST00000467350 TRIM17Q9Y577 477 aa12.78□□□□□ -0.36
RERE-209ENST00000467350 SSC5DA1L4H1 1573 aa12.77□□□□□ -0.36
RERE-209ENST00000467350 ENTPD3O75355 529 aa12.77□□□□□ -0.37
RERE-209ENST00000467350 MAP4K4O95819 1239 aaPredicted RBP12.77□□□□□ -0.37
RERE-209ENST00000467350 TCP10Q12799 353 aa12.77□□□□□ -0.37
RERE-209ENST00000467350 PPIL2Q13356 520 aa12.77□□□□□ -0.37
RERE-209ENST00000467350 KIF22Q14807 665 aa12.77□□□□□ -0.37
RERE-209ENST00000467350 TAF1CQ15572 869 aaPredicted RBP12.77□□□□□ -0.37
RERE-209ENST00000467350 ERICH6Q7L0X2 663 aa12.77□□□□□ -0.37
RERE-209ENST00000467350 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
RERE-209ENST00000467350 ZKSCAN4Q969J2 545 aaPredicted RBP12.77□□□□□ -0.37
RERE-209ENST00000467350 EFCC1Q9HA90 598 aa12.77□□□□□ -0.37
RERE-209ENST00000467350 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
RERE-209ENST00000467350 UQCRFS1P1P0C7P4 283 aa12.76□□□□□ -0.37
RERE-209ENST00000467350 ADORA1P30542 326 aa12.76□□□□□ -0.37
RERE-209ENST00000467350 SOX10P56693 466 aa12.76□□□□□ -0.37
RERE-209ENST00000467350 RASGRF1Q13972 1273 aa12.76□□□□□ -0.37
RERE-209ENST00000467350 OTOP1Q7RTM1 612 aa12.76□□□□□ -0.37
RERE-209ENST00000467350 ZSCAN29Q8IWY8 852 aaPredicted RBP12.76□□□□□ -0.37
RERE-209ENST00000467350 BRI3BPQ8WY22 251 aa12.76□□□□□ -0.37
RERE-209ENST00000467350 IDI2Q9BXS1 227 aa12.76□□□□□ -0.37
RERE-209ENST00000467350 ZNF112Q9UJU3 913 aa12.76□□□□□ -0.37
RERE-209ENST00000467350 RPAP1Q9BWH6 1393 aaPredicted RBP12.76□□□□□ -0.37
RERE-209ENST00000467350 IRF6O14896 467 aa12.75□□□□□ -0.37
RERE-209ENST00000467350 IGSF3O75054 1194 aa12.75□□□□□ -0.37
RERE-209ENST00000467350 ATP8B2P98198 1209 aa12.75□□□□□ -0.37
RERE-209ENST00000467350 OS9Q13438 667 aaPredicted RBP12.75□□□□□ -0.37
RERE-209ENST00000467350 CCDC158Q5M9N0 1113 aa12.75□□□□□ -0.37
RERE-209ENST00000467350 NBPF11Q86T75 865 aa12.75□□□□□ -0.37
RERE-209ENST00000467350 SPATA5Q8NB90 893 aa12.75□□□□□ -0.37
RERE-209ENST00000467350 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
RERE-209ENST00000467350 PICK1Q9NRD5 415 aa12.75□□□□□ -0.37
RERE-209ENST00000467350 RCAN3Q9UKA8 241 aa12.75□□□□□ -0.37
RERE-209ENST00000467350 SNCAIPQ9Y6H5 919 aa12.75□□□□□ -0.37
RERE-209ENST00000467350 CXCL11O14625 94 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 TLR2O60603 784 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 GNRH1P01148 92 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 MS4A1P11836 297 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 RLBP1P12271 317 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 NFIAQ12857 509 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 TMEM57Q8N5G2 664 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 GPR108Q9NPR9 543 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 LRP2BPQ9P2M1 347 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 FAM198AQ9UFP1 575 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 PTPN22Q9Y2R2 807 aa12.74□□□□□ -0.37
RERE-209ENST00000467350 ZNF646O15015 1829 aaPredicted RBP12.74□□□□□ -0.37
RERE-209ENST00000467350 GAKO14976 1311 aa12.73□□□□□ -0.37
RERE-209ENST00000467350 GPR75-ASB3A0A0A6YYF3 556 aa12.73□□□□□ -0.37
RERE-209ENST00000467350 BTBD19C9JJ37 291 aa12.73□□□□□ -0.37
RERE-209ENST00000467350 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
RERE-209ENST00000467350 INPP5BP32019 993 aa12.73□□□□□ -0.37
RERE-209ENST00000467350 BTDP43251 543 aa12.73□□□□□ -0.37
RERE-209ENST00000467350 RGS3P49796 1198 aa12.73□□□□□ -0.37
RERE-209ENST00000467350 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
RERE-209ENST00000467350 FAM43AQ8N2R8 423 aa12.73□□□□□ -0.37
RERE-209ENST00000467350 CD99L2Q8TCZ2 262 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms